Xenopus laevis (African clawed frog): 108700026
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Entry
108700026 CDS
T01010
Symbol
rabgap1.S
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108700026 (rabgap1.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108700026 (rabgap1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Motif
Other DBs
NCBI-GeneID:
108700026
NCBI-ProteinID:
XP_018088355
Xenbase:
XB-GENE-17330287
UniProt:
A0A1L8F201
A0A974H5H4
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All DBs
Position
8S:complement(42937680..43061868)
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AA seq
1070 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVFKQGDEMHSANNGSDDEKTGLKIVGNGSEQQL
QKELEDVLMDTPAEYQDLHVEEIEKAQAEEDPVQPSDEVSITSSTVNPSSVGLQKTDMSL
PVKAAQQECIHGTSVFSSVPEEDSVLFSKLTYLGCASVNAPRSEVEALRMMSILRGQCQN
ALDVTLSVPNVSEGTVRLLDPQTNTEIAKYPIYKILFCVRGHDGTTESDCFAFTESHYNA
ELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSASIPPQTPDSDIFTFSVSLEIKE
DDGKGYFSAVPKEKDRQCFRLRQGVDKKIVIYVQQTSNKELAIERCFGLLLSPGKDVRNS
DMHLLELESMGKSSDGKSYIITGSWNTKSPHFQAINEETPKDKVIFLTTAVDLVITEVQE
PVRFLLETKIRVCSVNERLFWPFSKRSSTENFFLKLKQIERKERKNNCDTFYEVICLESE
SERERRKTTASPSIRLLQYGQQTTSIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILET
WGDLLSKWHLNLSVRPKQLSALVRSGVPEALRGEVWQLLAGCHNNDCLVEKYRLLITKES
PQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLL
HMPEEQAFSVLVKIMFEYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYTHFLEISLEA
HMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTDFEGAL
KYFRVQLPKRYRSEDNAKRLMELACSLKISQKKLKKYEREYHMMREQQAQQEDPVERFER
ENRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKSDALNKELLMTKQKLIDAEE
EKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSDRLEKQHSSNKAEIE
KIRQKVDGCERCREFFNTEGHLKPVSILKESFTMEDTDEEKESLKNQLREMELELAQTKL
QLVEAECKIQDLEHHLGLAFNEVQAAKKTWFNRTISSIKTATGVQGKETS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcttctgtggggaagatcagtgtttcttctgattcagtgtcgaccctg
aacagtgaggactttgtgctcgtttttaagcaaggggatgaaatgcattctgcaaataat
ggtagtgacgatgaaaagactggactaaagattgtggggaatggcagtgagcagcagctt
cagaaggaacttgaggatgtccttatggacacaccagctgagtatcaggatttgcatgta
gaggagattgaaaaggctcaggctgaagaagacccagtacagccctccgatgaagtctca
attacatcttctactgtgaacccatcatcagtagggctgcagaagacagacatgagcctg
ccagttaaagcagcccagcaagaatgtatacatggcaccagtgtgttctcttcagttcct
gaggaggacagtgtcttgttcagtaagcttacttacctagggtgtgcatctgtaaatgct
cctcgaagtgaggtggaggccctaagaatgatgtctattctgcgggggcagtgccagaat
gccctagatgttactctgtctgtgcctaatgtttctgaaggaactgtccgacttctggac
cctcagacaaacactgaaattgcaaaatacccaatctacaagattttgttttgtgttcga
ggacatgatggaactacagaaagtgactgttttgcattcactgagagtcattacaatgct
gagctgtttagaatacatgtgttccggtgcgaaatacaagaggctgtgagccggatactt
tacagttttgcaacagctttccgtcgttcagccaaacagacaccactctctgcttccata
ccaccacagacgccagacagtgacatctttactttctctgtatcccttgagattaaggag
gatgatggcaaaggctatttcagtgcggtccctaaagaaaaagacagacagtgcttcaga
cttcgccagggtgtagacaagaagattgtcatttatgttcagcagacttccaacaaagaa
ctagccattgaaaggtgttttgggctgcttctcagtcctgggaaagatgtgcggaatagt
gatatgcacctattagaactggagtccatgggcaaaagttctgatggaaaatcatacatt
atcactgggagttggaatacaaaatccccacattttcaggctattaatgaagaaactcca
aaagacaaggttattttcttgaccactgctgttgatctagtgattacagaagttcaggag
cctgtgcgtttcctcttagagaccaagattagagtctgttcagtcaatgaacgcctgttc
tggccttttagcaaaaggagttccacagaaaatttcttcctaaaattgaaacagattgag
cggaaagagcgtaagaataactgtgatacattttatgaagtaatatgtttggagagcgag
tcagagagagagagaaggaaaacaactgccagcccatcaatccgtctgttgcagtacggg
caacaaacaaccagtatcccctcaccaccagaagatgatgaagaagaagataacgatgaa
cctctcttgagtgggtctggtgatgtgtcgaaggaatgtgccgagaaaatcctagaaacc
tggggggatcttctatcaaaatggcacctaaatctaagtgttcgaccaaagcaactatca
gcgcttgttaggagtggtgtgccagaggcacttagaggagaggtgtggcaactgctagca
ggatgtcacaacaatgactgcctggtggaaaaataccgactgctcatcactaaagagtcc
ccgcaagacagtgctataacacgggatatcaatagaacttttccagctcacgattacttc
aaagacacggggggtgatgggcaggactccctatacaagatttgtaaggcctattctgtg
tatgatgaagagattggttattgccaaggacagtcttttcttgctgccgttctcctgctc
catatgcctgaagaacaagcattcagtgtcctggttaaaatcatgttcgagtatggtctc
agggaactgttcaaacagaattttgaagatctgcattgcaaattttaccagctagagcgc
ctgatgcaggagtacattccggacctttacacccatttcttagagatcagtctggaagcc
cacatgtatgcatcccagtggtttctcaccctcttcactgctaagttcccactatatatg
gtcttccacatcattgacttgctgctttgtgagggaataagcgtcatattcaatgttgca
cttggattgttaaaaacttctaaagatgacctactcttgacagactttgaaggagcttta
aaatattttcgagttcaacttcccaagcgataccgctctgaggacaatgccaaaagactg
atggaactagcctgcagcctaaagattagccagaaaaagctcaagaaatacgagcgggaa
taccacatgatgagagaacagcaggcgcagcaggaagacccagtggaaagatttgagcgt
gaaaatcgtcggttgcaggaggcaaacatgagactggaacaagagaatgatgatcttgcc
catgagctggtcactagtaagatagcactacgtaaggatctggataatgcagaggaaaaa
tctgatgctcttaataaggagttactaatgactaaacagaagcttattgatgcagaggag
gagaagagacgcctagaggaagaatctgcacagctgaaggaaatgtgtcgccgggagctc
gataaagcagagtctgaaatcaagaagaatagctcgataattggagattacaaacagata
tgttcccaactaagtgatcgtcttgaaaagcaacattcttcaaacaaagcagaaattgag
aagatccggcaaaaggtagatggatgtgagcgttgcagagaatttttcaacacagagggt
catttgaagcctgtcagcattttgaaggagagcttcaccatggaggacacagatgaagag
aaagagtctctgaagaaccagctgcgggagatggagttggaactggcccagaccaaactg
cagctggtagaggcagagtgtaaaatacaggacttggagcaccatttgggccttgctttt
aatgaagtacaagctgcaaaaaagacctggttcaacaggaccatcagctccataaaaact
gccacgggagtgcaaggaaaagagacctcttaa
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