Xenopus laevis (African clawed frog): 108700058
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Entry
108700058 CDS
T01010
Name
(RefSeq) uncharacterized protein LOC108700058 isoform X2
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04080
Neuroactive ligand-receptor interaction
xla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108700058
04082 Neuroactive ligand signaling
108700058
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108700058
Ion channels [BR:
xla04040
]
Ligand-gated channels
GABA-A
108700058
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
108700058
NCBI-ProteinID:
XP_018088408
UniProt:
A0A8J0TGN6
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Position
8S:48840340..49092823
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AA seq
487 aa
AA seq
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MNCVTSHHWKAPRSASRRRKHCRLVSTSNRQKRQCDIPQGDSANRMEHSYAILHEMPCDP
VSVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYTALPLNLTLDNRVADQLWLPD
TYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIE
SYGYTIDDIKFFWQGGEEVAVTGVSALELPQFTIIETRLVSKNVVFTTGSYPRLSLSFRI
KRNIGYFILQTYMPSVLITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPK
IPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPQQQKKLNDRTNKANNERHRYEER
RVREQVDPYGNILLSTLDMSSELMSAEMGSSVGDSRNSVLLYDTSGIQFRKQLTSRGDGF
GHTPLERHVPMTAAHGRANCRLRRRSSKLKLKIPDLTDVSTIDKWSRIIFPITFGFFNLV
YWMYYVN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtgtcacttcacatcactggaaggcgccccgatcggcgagcaggaggaggaaa
cactgcaggctggtttctacatccaacagacagaaaagacagtgcgatattccacaaggg
gacagtgccaacaggatggagcatagttatgctattttacatgagatgccatgtgatcca
gtttctgtggggatgagtatacacatctcaagtattgaccaaatatctgaggtcaacatg
gactacaccatcaccatgtattttcagcaaagttggcgtgataagcgcctggcctatacc
gctctccctctcaatctcacattggataatcgtgtggctgatcagctctggctcccggac
acttacttcctgaatgataaaaagtccttcctgcacggagtcactgtcaagaaccggatg
atccgactgcacccagatggcacagtcctctatggactgagaatcacaaccacagctgcc
tgtatgatggatttacgcagatatcccttggaccagcaaaactgtacattggaaatagaa
agctatggatacacaatagatgatattaagtttttctggcagggaggagaagaagtagca
gtcacaggggtatctgctctggagctgccacaattcaccattattgagaccagactggta
tccaagaacgtcgtatttaccactggttcctaccctcgactgtcattaagtttccggatt
aagaggaacattggatatttcattcttcaaacctacatgccatcagtcttgatcaccatt
ctttcttgggtgtccttctggatcaactatgatgcatcagctgctagagtggcactaggg
gtgacaacggtgcttactatgacaaccatcaatacccacctgcgggaaacacttcccaag
attccttatgttaaggctattgatgtctatctgatgggatgctttgtcttcgtgttcctg
gctctgctggaatatgcctttgttaactatgtattctttggccgtggtcctcagcagcaa
aaaaagctcaatgatcgaacaaacaaagcaaataatgagcgtcatcgctatgaagaaaga
agagtacgtgagcaggttgacccttacgggaatattcttcttagcaccctcgatatgagc
agtgagttaatgtcagccgaaatgggaagcagtgtaggtgattcccggaactcagtgctg
ttgtatgacacctcagggatccagttccgtaagcagctaacctcaaggggagatggcttc
ggccacacgcccttggagcgccacgtgcccatgacagccgcccatggacgtgccaactgc
cgcctccggcgacgctcctccaaattaaagctaaagatcccagacctgacagatgtcagt
accattgacaaatggtccaggatcattttccccatcacctttggattttttaacctggta
tactggatgtactacgtcaactga
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