Xenopus laevis (African clawed frog): 108700095
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Entry
108700095 CDS
T01010
Symbol
rab39b.S
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108700095 (rab39b.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108700095 (rab39b.S)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xla04031
]
108700095 (rab39b.S)
Membrane trafficking [BR:
xla04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
108700095 (rab39b.S)
GTP-binding proteins [BR:
xla04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
108700095 (rab39b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
LigB
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
108700095
NCBI-ProteinID:
XP_018088453
Xenbase:
XB-GENE-6488931
UniProt:
A0A1L8F2P1
A0A974H5R2
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All DBs
Position
8S:complement(57583810..57593187)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDISNRRSFQNVHEWLEEAKAHVQPYQIVFVL
VGHKCDLDTQRQVTRHEAEKLASAYGMRYIETSARDAINVEKAFTDLTRDIYELVRKGEI
NMQEGWEGVKSGFVPNVVHSSEEVIKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaatctggctataccagtttcgtctcatcgtcattggagactcaaccgtgggt
aaatcgtgcctcatccgtcggttcacagagggccgctttgcccaagtctctgacccaacc
gtaggggtggacttcttctcaaggctggttgagattgaacctggcaagcggatcaagcta
cagatctgggatacagctggccaggagagattcaggtccatcacacgtgcctactacaga
aactctgtcggaggtctcctgctgtttgatatcagcaatcgccgctccttccaaaatgtc
catgagtggttagaggaagctaaggcacacgtgcagccttaccagatagtctttgtgtta
gttggtcacaagtgtgacctcgatacacaacgtcaagtaacaagacacgaggctgagaaa
ctggcatctgcttacggcatgagatacatcgaaacctcagcacgtgatgctatcaatgta
gaaaaagcttttacagatctgacacgagatatatatgagctggttaggaagggagagata
aatatgcaagaaggttgggaaggagtaaaaagtgggtttgtcccaaatgtagtgcattct
tcagaggaggtaattaagtcagacaggcggtgcctatgctaa
DBGET
integrated database retrieval system
