Xenopus laevis (African clawed frog): 108700282
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Entry
108700282 CDS
T01010
Symbol
bicra.S
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108700282 (bicra.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108700282 (bicra.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
108700282 (bicra.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
108700282
NCBI-ProteinID:
XP_018088838
Xenbase:
XB-GENE-17331258
UniProt:
A0A1L8F403
A0A974C4I0
LinkDB
All DBs
Position
8S:complement(85483876..85539331)
Genome browser
AA seq
1733 aa
AA seq
DB search
MDEEDGRCLLDVICDPQALNDFLHGHDQIGADDLLDNTGDAASAFFVGTGLHVQEAPGNH
LTTEPNPPTASVDLDFLEDDDILGSPSAGSASLASADQPCDILQQSLQEANITEQTLEAE
AELDLGSFQLPNLQPVVQATPDGTPQIFSGGADLIGLQQPAVLTHQALVQQSVGADAVNK
AISVQPFLQQVGLGNVTIQPISNLPGLPNGSPGGALGIGQIQVVGQQVMAINQPAQQIIG
KQVQPTQVANLPVGSYLAGTNTEQQQVTLTSSGVSPQNTGLVLQNKIPTVATTLNGNSMF
GCVSAAQCTQSLTVTSSLNSQVIIQRTPTPIQPKPAGVLQPKLFQISPKSFTPNNATLTI
QGEAALQQSKTQQNLAFMTGKSGQNVVLSSFPHGLHTNMFKQPPSQHQALGKPMSVQLLN
QGGSIVIPAQHAQAMLQGQNQFLLPGQLAGASALQANMAGQILAASHPSGQAHIIASQGP
GGQLLNLTNQNIASQLNLGQVLASQNAHGTAHILSGPIQLQAGQVGQPTLFQMPVSLAGS
LSTQSQSSVATSLNQAGQTVIQGVNLPNHVAMFNPSENLGQTVSIQQATAGSRQSPGIVQ
QQQQTQQVVQGAGIHPNADQPSILTVQTAQQAPQGQPQLQLNVQQQPQPLAPPPPQQALP
VQSQPSPSLATSPDKIVLGGTPSGTILNAESMQMFLQQKDQQFYEAALKMQQEGSLVQTS
AATHIPMPIYSLAASASTLNSSSTTTTSSSVPASVIVSSSASQLNRELVQNHGTAAEPKG
QSHIPHFPSSQSQQALTCQIPSGQQKLPGASPSHSLPHPPSPQLQPSSSHLSQMQSPHQS
RPPSQPQPLSRPPSRPHSRPPSQPQSVSRPPSEPLSRSCTPQMQNLFVIQNQIASPHGSS
QHPLRPPSQPQVQTPFASHQQSDIPQTLSSPQQHIQLQVQLSTPQSEVRAGVPVSFQATP
PSSDPQTHSFQLQFQAQTPIKTSISPQTAGQPLHLTTESQRSFQMTQSQIQALSLQNSMP
QQKQLLERYQQMQQLQQSLMLPSQQQATSTQTSPALGGQYSGQAPSVLTSGQGQSVPTQG
PLIGHSPGQVLVQPTPGGSSQAAQLSTLLQQQQTTVLVKNSGPAAATVPPDMNVYPGSVG
KSVSGQSKSVATLPVQTQAKTAVFSSVSGLSLGKGSLQIQVVGKGMSQIVPTAQTPAHPQ
FGALKKLPTLQPSKEACFLEHLHKHQGSVLHPDYKSPFHSFEDAFHKLLPYHVYQGLLPA
TQDLRKVDEEFEVVSTQLLKRTQAMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKVT
LSLDRQLAKDRPDEYVSTSSSRSQTFVPTAPSVSSSPCPVPAPETLKPPLVQTSTPIHPT
KLVIKHSGGGSPSVTWAKASPSLDTDDEALPSRSRPPIKTYEARSRIGLKLKIKQEAGLS
KVIHNTALDPVHQNPPPPPPPPAPPTVPTNTVIKAAVQSTPASITTPTGQMNGTLEHSLP
VEKKPLATYCRLPLRKTYRENVDAFVTGKPADKLSKMDKPAQPPTVMQQVKQEDGSRSVI
TSHKTQGGSNTEKAKKEESAKLGIYSRVDSKINNSDENPGGLRHDVKDDNQSFYRMIIKT
EPPDNETELNWEMQLPSAKRLKSEHFDVDNASFSSDSPQDDTLNEHLQSAIDSILNLQQP
QSGGGTNSLLRSSTQSSYHHSSSSSPFSSPVHRTDSYLTPNHNGGLGTRTLNR
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaagatggccggtgcttgttagatgtgatatgtgatccccaggctctgaat
gatttcttacatggacatgatcagattggtgctgatgacctcttggataacacaggagat
gctgcaagtgccttctttgtgggcactgggcttcacgttcaggaagctccaggaaaccat
ctaacaacagaacctaaccctcccaccgcaagtgtagatttagactttttggaagatgat
gacattcttgggtctccttcagctggcagtgccagccttgctagtgctgatcagccctgt
gatatccttcagcagagcctgcaggaggctaacattacagaacagactctggaagctgag
gcagagttggacttaggctccttccagctccctaacctacagccggtggtgcaggccacc
ccggatgggaccccccagatattttctggaggagctgaccttattgggctgcagcagcca
gcagtgctgacccatcaagccctcgtgcaacagtctgtaggggcagatgcggtcaacaaa
gctatcagtgtgcaaccttttcttcaacaagttggccttggcaatgttactattcagcca
atctctaacctccctggactaccaaatggcagccctggtggggcacttggcattgggcag
atacaagttgttggacagcaggtcatggccattaaccaacctgcacaacagattattggc
aagcaggtgcaaccaactcaagttgctaacttacctgtgggcagctacttggcagggaca
aacaccgagcagcagcaagtcacacttacatcaagtggagtatccccacagaacacagga
ttagtcttgcagaacaaaatcccaacagtggcgacaacgcttaatggaaattctatgttt
ggttgtgtgtccgcagcgcagtgtacacaatcccttacagttacatctagcttaaacagc
caggttattatacagcgaactccaactcctattcagccaaaacctgctggagtcctgcaa
ccgaaactgttccagatatcacccaaatcttttactccaaacaatgctacacttaccatt
cagggagaggctgcactgcagcagtcaaagactcagcagaacttggcttttatgactggc
aaatcaggacaaaatgtggtgctgtccagctttccccatgggctccacaccaatatgttt
aaacagccaccctcacagcatcaggcccttggcaagccaatgagtgttcagcttctaaac
caaggcggtagtattgtcatacctgcccagcatgcccaagctatgttgcaggggcaaaat
caatttcttttgcctggccagcttgcaggggcgtctgccctccaggccaatatggcaggg
cagatccttgctgcctcccatcctagtggacaagctcacatcattgccagccagggccca
ggaggccagctcctcaaccttactaaccagaatattgcaagccaattgaacttgggacag
gtcctcgcatcgcagaatgcacatggcacagctcacatcttgtcagggccaatacagctg
caagctggacaggttggccaacccaccttgtttcaaatgcctgtgtctttggctgggagc
ctgagcactcagagccagtcatcagttgccacatctttgaatcaagcagggcagacagtc
atccagggggtaaatttacccaaccatgttgcaatgtttaatccgtccgagaatcttggg
caaaccgttagtatccagcaagcaactgctggcagcagacagagcccaggcattgtgcag
cagcaacagcagactcagcaagttgtccagggggccggcatccatcccaatgcagaccag
ccctctattttgaccgtccaaactgcacagcaggctcctcaaggccagccccagcttcaa
ttgaatgtacaacagcagccacaacctttagctcccccaccacctcagcaagctttacct
gtccagtctcagcccagccccagcttggccactagcccggacaagattgttctgggtgga
acaccatcgggtactatcctgaatgcagaatccatgcagatgtttttgcagcagaaggat
cagcagttttatgaagcagccttgaaaatgcagcaggagggcagcctggttcagacctct
gctgcaacacacatacccatgccaatctacagcctagcagcttccgccagcacactgaac
agcagcagtaccaccactaccagcagtagcgtccctgcatccgtcatagtgagcagcagt
gcctcccagctcaaccgtgagctagtccagaaccacggaaccgcagcggagcccaaagga
cagagccacatacctcatttcccatccagccagtctcagcaggctctgacctgccagatt
ccatccggacaacagaagctgcccggagcctccccatcccactcgctacctcatcctcca
agcccacagttgcagccttcctcctctcacctttctcaaatgcagtcaccccaccaatct
cgtcccccctcgcagccacagcccctttctagaccaccatcgcgtccccattcacgccct
ccatctcagccacagagtgtttcccgccctccctccgaacccctctcccgatcctgtacc
ccccagatgcagaatctgtttgtcattcaaaaccaaattgcctcaccacatgggtcctca
cagcaccccttacgtcccccatctcaacctcaggtacagactccatttgcttcccatcag
cagtcagatattccacaaacgttgtcttcccctcagcagcacattcagcttcaagttcag
ctgagcacccctcaatctgaggttcgagcaggtgtccctgtctccttccaagccactcct
ccttcatcagatccccagacccattcattccaactacagtttcaggcacagacccctatc
aaaacctccatctcacctcaaactgctggtcagccgctccatctcactacggagtcccag
cgttccttccagatgacacaaagccagatacaggcactctctctccaaaactccatgccc
caacaaaaacaactgttggaaaggtatcaacagatgcagcagttgcaacaaagtctaatg
cttccctcccagcagcaagcaaccagcacccagacatccccggcacttggaggacagtac
agtgggcaggccccctctgtgctgaccagtggacaaggccaatctgtgcccacccaaggc
cctctgattgggcattcccctggccaagtattggtgcagcctacccctggaggaagtagc
caggcagcacaactttcaacactacttcagcagcaacagacaacggttctggtcaaaaat
tcagggcctgcagctgctactgtgcctccagacatgaatgtgtatcctggttctgtggga
aaatctgttagtggacagagtaaatctgttgcaactcttccagtacaaacacaggccaag
acagcagtgttcagctcggtttctggactgagcttgggcaagggctctcttcagatccag
gttgttggcaagggcatgtctcaaattgttcccactgctcagacaccagcccatccacag
tttggagcattgaaaaaacttcctacactacagccaagcaaggaagcttgttttttagag
catttgcataaacatcaaggctcagttctgcatcctgactacaagtctccctttcactca
ttcgaagatgcctttcataaacttcttccttatcatgtatatcaaggtcttctgccagct
acacaggacttaaggaaggttgatgaagaatttgaagttgtatctactcagcttctaaag
cgcactcaggccatgctgaacaaatatcgcctgctgctcttggaggaatccaggagagtg
agcccttccgcagagatggtcatgattgacagaatgttcattcaggaggaaaaagtaact
ttgtccttagaccggcagctggccaaggacagaccagatgaatatgtatccacttcttcc
tcgcggtctcagacatttgtgcccactgcaccctctgtatcttcctctccttgtccagtc
ccagcaccagagaccctgaagcctcctctagtacagacttccaccccaatccacccaacc
aagctggtgattaagcacagtggcggaggttctccttctgtcacatgggctaaagcgtcg
ccatcccttgacactgatgatgaagctcttccatcccgcagcagacctcctattaagaca
tatgaggcccgtagcagaataggattaaaactgaagatcaagcaagaggctgggctcagc
aaagttatccacaacacagccttggatcctgtgcatcaaaatcctcctccaccacctcca
ccccctgctccacctacagttcctaccaacactgtcatcaaagctgctgttcagtctact
ccagcctccatcactacaccaactggacagatgaatggtacattagagcattctttacct
gttgagaagaagcctctggcgacatactgccggctacctctgcgcaagacatacagagag
aacgtggatgcctttgtcacggggaaaccagcagataagttgtcaaaaatggataagcca
gcacaacctcctactgtgatgcaacaggtaaagcaggaggatggatcgagaagcgtcatt
acctcccataagacacaagggggctcgaatactgaaaaggcgaagaaagaggagagtgcc
aagttagggatttacagccgagtagactctaagatcaacaacagtgacgagaaccctggg
gggttaaggcatgatgtcaaggatgataaccagagcttttacagaatgattattaaaacc
gaacctccagataatgagacagagctgaactgggagatgcagcttccttctgcaaaaagg
ctaaagtctgaacattttgatgttgataatgctagcttctctagtgatagtccacaagat
gatactctaaatgagcaccttcaaagtgctattgatagtattctcaacctacagcagccc
cagagtggtggaggaacaaattctcttctccgctcctctacccaatcgtcttaccaccac
tcttcgtcgtcttctccgttctcctccccggtccaccgcacagactcttaccttaccccc
aaccataatggaggcctaggtaccaggacgttaaacagataa
DBGET
integrated database retrieval system
