Xenopus laevis (African clawed frog): 108700308
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Entry
108700308 CDS
T01010
Symbol
npas3.S
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108700308 (npas3.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108700308 (npas3.S)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
108700308
NCBI-ProteinID:
XP_018088882
Xenbase:
XB-GENE-6489246
UniProt:
A0A1L8F447
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Position
8S:87787333..88121729
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AA seq
954 aa
AA seq
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MIRIFPDFSVQVTAAPGTGGVPPEPGAIRSGGANGSHQHNVPGVGSYQQRGASRPISACP
APCPPDLNLSLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLT
ISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVLGSQRRRSPSSLAMDAFESHLGSHILQS
LDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPG
RGLLSQSANDDGASSASSSSQSETPEPVESTSPGILPRDNSLERSFFIRMKSTLTKRGVH
IKSSGYKVIHVTGRLRLRISLSHGRSGAGQVMGLVVVAHALPPPTINEVRIDCQMFVTRV
NMDLNIIYCENRISDYMDLNAVDLMGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYR
WMQKNGGYIWVQSCATISINAKNANERNIIWVNYILSLQEYKDVPMDIAQLPHLPEKTSE
SSETSDSDSDSKDNSEDNENPKSGGKGNLSEQSEDPEHKQPGAQSDPEMNCDEEGNSSSE
ACSEESEEGEDCELRKSEEVMEHGGLSVLGGIGSLDALGPMHIKVERYAESEADMRGPDS
LSSDSAKDSESGEEDEDDNGVRVAGVLNRHQRRKRRRRNRTGPCGGRRRRLSGGSSPGGI
ENSLGDPPRLLPSTPPPTGACASSSVLKIKTEMSEPINFDNDSSIWNFPPNREISRNESL
YSITKPPTGGEHFSPSPSSSAAPPALHVSIPDSVLTPPGGAEGVGRSKQQFAGSSAGLAT
VSSDPLSPPLSASPREKAPQTSGPSNSLLYAGELEALQRFQGGNVVLPLVHRVAGTLAAT
GSSGQRVYTTGTIRYAPAEVTLGNLLPNTHPVNFVDVNGPGFGLDPKTPMEMLYHHVHRL
NMSGPFGGAVTGAGLTQVPAASVFTTAEGIFSSLPFPVYSNGIHATQTLERKED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggacttcagcgtgcaggtgactgcggctccggggactggcggg
gttcctcccgagcccggggcgatcaggagcggtggagccaacgggagtcaccagcataat
gtgcccggggtcggctcctaccaacagcggggagcctccagacctatcagcgcatgtccc
gccccctgtcctccagacctcaacctaagtttacaagccctgcggaaagaaaagtcgagg
gacgcggctcgctctcgacgtgggaaggagaactttgagttttacgagctggccaagctt
ctcccactccctgcagccatcaccagtcaacttgacaaggcatccatcatccgtctgacc
atcagctacctgaagatgagagactttgccaaccagggtgacccaccctggaacctacgt
atggaaggtcctccaccaaacacctctgttaaagttctagggtcccagcggaggaggagt
cccagctctctggcgatggatgctttcgaatctcatctggggagtcacattctccagtct
ctggacggatttgtatttgcactaaaccaagaaggaaagtttttgtacatttcggagact
gtgtccatctaccttggcttgtctcaggtggaactaacaggaagcagtgtgtttgactat
gtgcacccaggggaccacgtggagatggcagagcagcttggcatgaaacttccccctggt
cgagggcttctatcccagagtgccaatgatgacggagccagttcagcatcctcatcttcg
cagtcagagacccctgagccggtggagtcgaccagccctgggattctccctcgggataac
tctttggaacgctccttttttatcaggatgaaatccactctgaccaagagaggggtgcac
atcaaatcctcggggtacaaggttatccacgtcactgggcgacttcgtctccgcatctcc
ctgtcccatggacgttcgggggccgggcaagtgatgggtcttgtggtggtggctcatgcc
ctccctcccccaacgatcaatgaagttcgaatcgactgccaaatgtttgtaactcgtgtc
aacatggacctcaatattatatactgtgaaaataggatcagtgattacatggaccttaat
gctgtggatctgatgggtaaaagatgctatcactttatccatgctgaggatgtggagggc
atcaggcacagccatcttgacttgctgaacaaggggcagtgtgtgaccaagtattaccgc
tggatgcagaagaatgggggctatatctgggtccagtcctgtgccactatctctatcaat
gccaagaatgccaatgagagaaacatcatctgggtcaactatattcttagtttgcaagaa
tacaaggatgtccccatggatattgctcagcttcctcacttacctgagaagacatcggaa
tcctctgagacttctgactctgattcggactccaaggataattcagaggacaatgaaaat
ccaaagtcaggtggaaaggggaatctctcagagcagagcgaagatccagagcacaagcag
ccaggggcccaatctgatccggagatgaactgtgacgaagaaggaaatagttctagtgaa
gcctgcagtgaggagagtgaagaaggtgaagactgtgaattgagaaagtcagaggaggtg
atggagcatggggggttgagtgtcctgggaggtattggttccttggatgccttaggccca
atgcacataaaggtggagcgttatgcagagagtgaggcagacatgcgagggccggattct
ttgagctcagacagtgccaaggactcagagagtggagaagaggacgaagatgataatgga
gtcagagtagcaggggtgcttaatcgtcatcagaggaggaaaagaaggagaagaaacagg
acaggaccatgcggaggacgcaggagaagattgtctggaggatcaagcccaggcggcata
gagaactcattgggggaccctcctagacttctcccctccaccccacctcccacaggagcc
tgcgcctcctcttctgtacttaagatcaaaacagaaatgtcagaacccatcaactttgac
aatgacagtagcatttggaactttcctccaaacagggaaatctcccgtaatgagtctctc
tacagtattaccaaacctcccacaggaggtgagcacttctccccctccccgtcctcctct
gctgcccccccagcccttcatgtttccatcccggactctgtcctcacgcccccaggtggg
gcagaaggtgttggacgcagcaaacagcaatttgctggatcctcagcaggattggctact
gtcagttcagaccccctttcccctcccctctccgcttcccccagggaaaaggcacctcaa
accagtggcccatctaactctcttctgtatgcaggggagctggaagctctgcagaggttt
caggggggaaatgtggttttgccccttgtgcatcgtgtggcagggacattagcagccact
ggaagcagtgggcaaagggtatataccacgggcaccattcgctatgcgcctgcagaggta
actctgggcaacctccttccaaatactcaccctgtgaactttgtggatgtgaatggccca
ggatttggactggaccccaaaaccccaatggagatgctctaccaccatgtgcaccggtta
aatatgtctggtccatttggaggagctgttacaggagctggtcttacccaagttccagct
gctagtgtcttcacaacagcagagggaatcttctcatctcttcctttcccagtctacagc
aatggcatccatgcaacacagactctagaacggaaagaggactga
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