Xenopus laevis (African clawed frog): 108700359
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Entry
108700359 CDS
T01010
Symbol
arhgef11.S
Name
(RefSeq) rho guanine nucleotide exchange factor 11 isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108700359 (arhgef11.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108700359 (arhgef11.S)
Membrane trafficking [BR:
xla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108700359 (arhgef11.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
RGS
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
SPARC_Ca_bdg
PH
Motif
Other DBs
NCBI-GeneID:
108700359
NCBI-ProteinID:
XP_018088971
Xenbase:
XB-GENE-17334252
UniProt:
A0A974C4L2
A0A1L8F4M1
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All DBs
Position
8S:complement(97421750..97520315)
Genome browser
AA seq
1606 aa
AA seq
DB search
MSISSAQTSIDRSASKRYPRLPRLSSLSSASDGSAERRSPGHQRQPCNESNESTGLVQRC
VIVQRDQNGFGFTVSGDRIVLVQSVRPGGAAMRAGVQEGDRIVKVNGTLVANSSHIEVVK
LIKSGAYVALTLLGSPPPSMGMSGYQQDLSSSVSPRNILVSPIPPPPPPLPQSHHITGPK
PLQDLDFQKHATEILWNMLKQEEADLQNLCDVYNRSPNPSLQEQIERARKRVHQLQHKIR
PEIPSTGNLLRSYSDCSSVVYKVKEGRFSVDSQDGDSGLDSGTERISSLSEYSMNRNSVL
SDLGMDSSHTSPIIPTKLFHHHHRRHGSDTTFIATSEQVSDHRRSTIIGPEEDCDHGYYM
TEQSDGLFQDLEKLKTRPAHMGVFLRYIFSQADPNPLLFYLSAEACQHLSTTDAFTLRKE
VWNIFLDKSAPLRVKIPDQLLNEIESRLRNSEDIRGVFSEAQEAMLPEIQEQIQDYRTKR
TMGLGSLYGENDLFDLEIDPHRERHVAAKQIAQLEDILSKYEKEISSPMAFALSMYVKYA
GIHTQDIRPASISEKSIPDREKWLPFFPKNKKSSNAKKDKESAEDKKRNPILKYINKPKS
TSQSTFHVPLSPGEVKPGNVRNIIQHFENNQQYDVPELNLQRLSTGSFPEDLLGSDSIRS
EVKLGRSESLKGREELKKSRKLDNVPRSRSDVDMDAAAEATRLHQSASSSASSLSARSLD
NPTPPYTPKLCRRSMESPNLGLTGELLLSNLQEDDLGHLSDLDPEPDAQNWQHTVGRDVA
LHLPPKERARQEVIHELFVTEASHLRVLRVLDLVFYQKMRKENLLTPDELWLVFPNLPEL
IEIHNSLAESMKRVREEGPIIKEIGDLMLLQFDGASGEEVRMEAAKFCSYQTSALELIKA
KKRKETRFSLFMQEAESNPQCRRLQLKDLIVSEMQRLTKYPLLLENVLKHTDSGTQEHEK
LYRCRDRCRDILKYVNESVKQAENEHRLAEYQKRLDASHLERSNNPLAGEFKNLDLTTRR
MIHEGPLTWRVTKDKNIDLHVLLLEDLLVLLQKQDEKLVLKCHSKTAMVSTDTKQTFSPV
IKLNSVLVRSVATDKRALFIICTSDLGPQIYELVALTSSEKNTWKDLLEEATNGAMRNPP
GVTKRKSQDINRPTSASMVLQRAHMPKVLAEGVLRHNSEDPQSGDESAGEFLGHQKPDVV
LEESEREEDEEDEARTPTLLPIPSKEEDAGGGTRGLDSSNHIPYQWPAVTEGLAESALDD
VHNLRQLILKNMLHHGHSEYNSCSAPVAEPEDDLTPTPSIIGGHGHPWDTMTDAVLENLG
GDQTTEEKETSVPPSVSSSESSRSVLNFPHGDRPGSRDGEETAWSLVERYPQSSSVHQNQ
SEQLHCEDHSNQSYRVVRTAEVVGNYDVIPLPDSSQSQSVLQEAGGGAIVDGNFFYVTAS
TASAASAKEDNEVSESQMNSDRAGLSFLESQESNHTPTYQPELATPPSRNTERDPLSSDL
LPPKLVIQEVDIIFRTIEQLTAKLHRLKVVESAHQELLRSLGRSATEDHYHEREHMAEKD
NQAQKHQGSNLNSSSLFFVKNSISVSLHRDGNTDPQEDAINLAMGI
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcagttccgcacagacttcaatagaccgatccgcttctaaacgctatcctcgt
ttgccaaggttgagtagcctgtcatcggctagtgacggatctgccgagcgaaggtctcct
ggacaccagcgtcagccttgtaacgagagtaacgagtctacaggcctggtccagcgctgt
gtcattgttcaaagggaccaaaatggatttggtttcacggtcagcggagatcgaattgtt
ctggttcagtctgtacgtccaggtggggcagcaatgcgagctggggtgcaggagggagac
cggattgtgaaggtcaacggcacgctggtggctaacagctcacacatcgaagtggtcaag
ctgattaaatccggtgcttacgtggctctcactctcctgggttctccacctccatccatg
ggcatgtctgggtatcagcaagacttgagctcctctgtgtccccacgtaacatattagtg
tcgccaattcctccacctccaccacctttgccgcagtcgcatcacatcacaggacctaaa
cccttacaggacctcgatttccaaaagcatgctacggaaattctttggaacatgttaaag
caggaggaagcagatctacagaatctgtgtgatgtgtataacagaagccctaaccccagc
ctgcaggagcagatagagagggccaggaagagggtgcatcagctgcagcataagataagg
ccagaaatacccagtactgggaatttgctgcgttcatacagtgactgcagctctgtggtg
tataaagtcaaagaaggtcgcttttctgttgattctcaggatggagacagtggcctggat
tcgggaactgaacggatatcatcgttgagtgagtattccatgaatcggaattctgtcctg
tcagacctcggaatggacagctcccacacctccccaatcatcccaacgaaactgtttcac
caccaccatcggcggcacgggtcagacaccacctttattgccacgtctgagcaggtatca
gatcataggaggtctacgataatcgggccagaagaggactgtgaccatggatattacatg
acagagcagtcagatggtctcttccaagatctggaaaagttaaagacccggccagcccat
atgggggtgtttctacgttatatcttctcccaggctgatccaaacccactgctcttttac
ctgagtgctgaggcctgtcagcatttgagtacaacagacgccttcacattgaggaaagaa
gtctggaacatcttccttgacaaaagtgcaccactgagggttaaaatccctgatcagcta
ctgaatgaaattgaatcccgtttgcggaactcggaagatatccgtggtgtgtttagtgaa
gcccaggaggcgatgctgccagagatacaggagcagatacaggattacaggacgaaaagg
accatgggattagggagcctgtacggggagaatgacctgttcgaccttgagattgaccct
cacagagaacgtcatgttgctgctaaacagattgcacagctggaggacatactatcaaag
tatgagaaagagatcagctcgcccatggcctttgccttgagcatgtatgtgaagtacgct
gggatccacactcaagatatccgtcccgccagcatctccgaaaaaagcatccccgacagg
gaaaagtggctcccgttcttccctaagaacaagaaaagcagcaacgccaaaaaggataaa
gagtcggctgaggacaagaagcgcaaccccatccttaagtatattaacaagcccaagagt
acgtctcagagtacatttcatgttcctttgtcccctggtgaagttaaacccgggaatgtg
agaaacattatccagcactttgaaaacaaccaacaatatgatgttcccgaacttaaccta
cagcggctttcaaccgggagcttccctgaagatctactgggctctgacagcatcaggtcg
gaggtgaaactgggccggtcagaaagcttaaagggacgggaagagttgaagaaatcccgc
aaattggacaatgttcctcgatctcgcagtgacgtagatatggacgcggcagctgaggct
acacggctacaccagtcggcttcatcctctgcatccagcctatccgcaaggtcattggat
aatcctaccccaccctatactcccaaattatgtcgaaggagcatggagtcgcccaatttg
gggttgactggagaattgctgctctccaacctgcaggaggacgacctgggtcacctctct
gaccttgaccctgagcccgacgcacagaactggcagcatacggtgggtcgggacgtggcg
ttgcacctgccacccaaagagagggcacggcaagaggtgatacatgagctgtttgtgaca
gaagcctcccaccttcgggtcctacgagttctggatctcgttttctaccagaagatgcgc
aaggagaacctgctgaccccagatgagctctggcttgtcttccccaatctcccagaactg
attgagatccacaactcgctggcagagtcaatgaagcgggtgagagaagaagggccaatc
atcaaagagatcggtgacctcatgcttttgcagtttgatggagcttcaggggaggaagtc
cgaatggaagcagccaagttctgctcgtaccagacatctgcccttgagttgatcaaagcc
aaaaagaggaaagagacccggttcagtctcttcatgcaggaagctgaaagcaacccccag
tgccgacgactgcagctgaaggacctgattgtgtctgagatgcaacggctgaccaagtac
cctctgctgctggaaaacgtccttaagcacacagactccgggactcaggaacatgaaaag
ctgtaccgttgccgtgatcggtgtcgagatattctgaaatatgtcaacgagtccgtcaaa
caggcagaaaatgaacatcgactggctgagtatcagaagcgactggacgcaagccacttg
gagcggtcgaataatcctctagctggagagtttaagaacttagacctgaccacaaggcga
atgatacatgaggggcctctcacctggagggtaacaaaagacaagaatatagacttgcat
gttctcttgctggaagatctcctcgtattacttcagaagcaggatgagaagctggtgctc
aaatgccatagcaagaccgccatggtctccaccgacaccaaacaaacctttagtccggtc
attaagctgaattctgtccttgttcgctcggtggctacagataaaagagccctgtttatt
atctgcacttcagacttgggacctcagatctacgagctggtggcactgacatcctcagag
aaaaacacgtggaaggatttattggaagaagcaaccaatggtgccatgaggaatcctccc
ggtgtcaccaaacggaaatcccaggacatcaatagaccaacctctgccagcatggtccta
cagagagcccacatgcccaaagtcttggcagaaggagttctaagacataacagtgaggac
cctcaatcaggtgatgagagcgctggggaattcttaggccaccaaaagccagatgtcgtc
ctagaggaatcggaaagggaggaagatgaagaagatgaagctcggacacctaccctgctg
cctatcccatctaaagaggaggatgccggaggtgggacacgggggttagactcttccaac
catattccctaccagtggcctgcagtgactgaagggctggctgagtctgcactggatgat
gttcataacctccgccagttgatcttgaagaacatgctccaccacggccattccgagtac
aactcttgctctgccccagtggctgagcctgaagatgacctcacgcctacgccttccatc
attggaggacacgggcacccatgggacactatgacagacgcagtattagaaaatctaggc
ggagatcagactactgaagagaaggagacctctgttccaccatcagttagcagctctgag
agcagcaggtctgttttgaactttcctcatggagatagaccaggttccagagatggggag
gagactgcttggagtttggttgaacgctacccacaaagcagttctgttcatcagaaccaa
tcagagcaactacactgtgaggaccatagtaaccaaagctacagagttgttagaacagct
gaggtggtgggaaattatgatgtcataccgttgccagacagcagccaatcacagagtgtg
ttgcaggaagctggcggtggagctattgtagatggaaatttcttttatgtaactgcgtct
acggcttctgcagcttctgcaaaggaagataatgaagtctcagaatcccaaatgaactct
gaccgggcgggcttgtccttcttggaatctcaagagtcaaaccacacgccaacttaccag
ccagaacttgccaccccaccatcaaggaatacagaaagagatccactttcatcggatctc
ctgcccccaaaacttgtcattcaggaagtagatattatcttcaggacgatagagcagctg
acggccaaactccacaggctgaaggtagtagagtcagcccatcaggagcttctgcgatcc
ttaggaagaagtgccacagaagaccattaccatgagagagagcacatggcagagaaggat
aatcaagctcagaagcatcaggggtccaatttgaacagctcctctctattctttgtgaag
aacagcatatcggtctcgcttcatcgagatggcaatacagacccacaggaagatgctata
aatctggccatgggaatataa
DBGET
integrated database retrieval system
