Xenopus laevis (African clawed frog): 108700373
Help
Entry
108700373 CDS
T01010
Symbol
ncstn.S
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108700373 (ncstn.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
DUF4006
Peptidase_M20
Motif
Other DBs
NCBI-GeneID:
108700373
NCBI-ProteinID:
XP_018088991
Xenbase:
XB-GENE-17339043
UniProt:
A0A974C4X3
A0A1L8F4M3
LinkDB
All DBs
Position
8S:complement(99208641..99227770)
Genome browser
AA seq
713 aa
AA seq
DB search
MALRTVCCVRRLSEAYRGWRCLGLVVALLAVVCGGNSVERKIYIPLNSTAPCVRLLNATH
QVGCQSSKNGDTGVIHVVEQEEDLQWVLESGPHPPYIVVLEAHLFTRDTMQKLKGSRRVS
GIAVTFSKTSPAAGFSPDPPCPNDGFGLYTSDHGSQYAHCNNITWNPLGTGLSYEEFQFP
IFLLRDENETEVIKQCYRDHNVPQNGSAPQHPLCAMQLSSFMNAVTNTVTCMRRNSLQSS
FSLSAEGVCDSIIVHNVWSSLKPINTTGTIPQEEELVVAAARADSHSFFWNLAPGADSAV
SGFVTLLAAAEALHKLNGTQDLPRNIMFVFFQGEIYDYIGSSRMVYDMEKGRFPVSLGNI
HSFVELNQVALRNDSYLWIHTDPISRNNETVNATVQEVVDSLVSASHDSNVTVQEIGHSQ
PLPPASLHRFLRARNIPGVVLTDHRTAYSNRYYHSLYDTADNIHMRYPEGLTEEEQLEYI
TDTARSLADVATVLANSLYKLAGGKGTEEIKADPKTVTQMLYGFLKMSNNSWFQSIIKED
WRKVLESGQVQYYMTGTIKGNSREPNYPAGLLLSVLANLTGTAVNLTKEECQNPEKIDDP
KKELYSYTWVQGPIESNTTSRRPYCVRSSIRSHMAESPAFELDQWDSTEYSTWTESRWKE
IKGRIFLVPSRELEVITLVLGIAILLVSLVATYFINAKADILFTNTNDSEVAY
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcggactgtttgttgtgtgaggagactgagcgaagcctatcggggctggagg
tgcctgggacttgtcgtggctctgctggctgtcgtgtgcggtgggaattcagtggagagg
aagatctacatcccattgaacagcaccgccccctgcgtccgactgctaaacgccacccac
caggtcggctgccaatcgtctaagaacggtgacaccggggtgatccatgtggtggagcaa
gaggaggacctgcagtgggtgctggagagcggccctcatcccccctatattgtggtgctg
gaggcccatctctttaccagagacaccatgcagaagttaaaggggagcaggcgtgtgtct
ggtattgccgttaccttttccaaaacaagccctgctgctggattctcccccgatcctccg
tgcccaaatgatggttttgggttatacaccagtgatcacggctcccagtatgcccactgc
aacaatatcacatggaacccgctcgggactgggctttcctacgaagaattccagttccca
atcttcctgctccgcgatgagaatgaaacagaagtcataaagcagtgctacagagatcac
aatgtgccgcagaatgggagcgccccccagcatcctctctgtgccatgcagctttcctct
tttatgaacgcagtcaccaacacagtcacctgcatgcggcgcaactccctccagtcatca
tttagccttagtgctgaaggagtgtgtgattcaatcatcgtgcacaacgtgtggagctcc
ctgaagcccatcaataccacaggcacaattccacaggaggaggagctagttgtggctgct
gcaagggctgacagtcactccttcttctggaatctggctccgggggcagacagcgctgtg
tcggggtttgtgaccctgctggctgcggcggaggctctgcacaaactaaacggcactcag
gatttgccacgaaatataatgttcgtcttttttcaaggagaaatctacgactatattggt
agttccaggatggtgtatgatatggagaaaggccgcttccctgtctcactggggaacatt
cattcatttgttgaactgaatcaggtggcgctaagaaatgactcctacctgtggattcac
actgatcccatctccaggaataacgagaccgtgaatgcaacggtacaagaggtggttgat
tccctagtgagtgcaagtcatgattccaatgtgactgtacaagaaattggccactcccag
cccctcccacccgcttccttgcatcgcttcctgagggctcggaacatccccggggttgta
cttacggatcacagaactgcttacagcaacagatattatcacagcttgtacgacacagcc
gataacatccacatgagatatccagaagggctgaccgaggaagaacaactggaatatatc
acggatacagcacggtctcttgcagatgttgccaccgtgcttgcaaactcgctgtacaag
ctagctggagggaagggcacagaggaaattaaggccgaccccaaaacggtcacacagatg
ttatacgggtttttaaaaatgtccaacaacagctggttccagtccatcatcaaggaagat
tggagaaaagttctggagagtgggcaggtgcagtattatatgacgggcactataaaggga
aactcaagggaacctaattatcctgccggtcttctactctctgtgttggccaacctcacc
ggaacggcggtcaacctgaccaaggaggaatgtcagaacccagaaaagattgacgatccc
aagaaagagttgtacagttacacgtgggtgcagggccctatagagagtaacaccacatcc
aggcggccatattgtgtgaggagttccattcgtagtcacatggcagagtctccggccttc
gagttggaccaatgggactccactgaatactctacatggacagagagtcgctggaaggag
atcaaggggcgcattttcttggtgccgagccgtgagctggaggtgatcacgttggtgctt
ggcatcgccatccttctcgtttctctggtcgccacgtattttatcaacgccaaagccgat
atcttgttcacaaacacaaacgacagcgaggtggcctattaa
DBGET
integrated database retrieval system