KEGG   Xenopus laevis (African clawed frog): 108700413
Entry
108700413         CDS       T01010                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    108700413
   03400 DNA repair and recombination proteins [BR:xla03400]
    108700413
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    108700413
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108700413
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_8 UBA_RAD5A GIP1_N CUE API5
Other DBs
NCBI-GeneID: 108700413
NCBI-ProteinID: XP_018089056
UniProt: A0A8J0TRS3
LinkDB
Position
8S:complement(102155134..102184945)
AA seq 1176 aa
MMTSVTTNRARGNSEQTPNQTQHKQRPQATAEQIRLAQMISDQNDADFEEKVKQLIDITG
KNQDECVIALHDCNGDINRAINVLLEGNPDTHSWEMVGKKKGVSGQKEAGQTEPSEEVRE
NRDRERDYSRRRGGAPRRGRGGSRGREFRAQENGLEGGKTGGSSGRGTERGRRGRGRGRG
GSGRRGGRFSAQGMGGTRGSPCCHSPMLLFRTFNPADYAEPSSTEDSYGNSSTWNSTTNF
EPDDGTRHDYIGGEGSNYPREFSTAPGMIYPGAWRTATEEWGTEDWNEDLSETKVFTASS
VSSVPVPSENVTITAGQRIDLAVLLGKSPSSLENETSSLESNRNTAPSQAGPIVFSNSKQ
NPVSQTSPGSSFSHHTMVSMLGKGFSDSEPKGGTTTGSQFLEQFKTAQALAQLAAQHSQS
EATGNTSWDLGAASQSPSLGQYDMKRSSDPFSKRPSFPQASTMMEVYLQEKQPVVSTSSA
VSVCPSSPLTGKSNTAPPMSPVSSENQSSSPQPAQQKMKQQKKKASLTSKIPALAVEMPG
SSDISGLNLQFGALLFGSEPVLPEYESSPTTNVAVSQSQNSLYTSPVSESPNTITANQSP
ESAYQGSSSIQSATFNSLSSTQGPVYEQRATQTRRYPNPITSSSSSSPQKDLSQSKNGFS
SVSAPTLQAPVSVEVPSVPTVKADSPSASSIVPLSDPVSTSSLLTTAGPHSSQISSLAHS
EDLQSAPTTLSTLSSQHQTSTSSSSVRTSVSTPLHTSVDTETSMHPSVTTFSSASSTVPT
TPSAPASSSINVGNLVLGLSSSSTIAPSTRSSIATTSGKAPPNLPPGVPPLLPNPYIMAP
GLLHAYPPQVYGYEDLQMLQTRFPLDYYSIPFPTPSAPLTGRDGSLANNPYSGDLAKFGR
GDASSPAPATTLAQPQQSQAQGHHTTQQTFLNAALPPGYSYTSLPYYTGVPGIPSTFQYG
PAVFPVAPTSSKQHGVNVGVNTSAAAFQQAPSYGSHGYNTGFDDMGQVSSVGDFCKVAFS
GASAAAQNKAAAVATNGPGAGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPATSF
NLPSALASAGPINPATAAAYQPAPFMHILAPHQQPHSQILHHHLQQEAQLPYMQILCYHL
LQDDQSGAGQRNQGASMTQKSQASKSAYSSYSWGSN
NT seq 3531 nt   +upstreamnt  +downstreamnt
atgatgacctcggtgaccacaaaccgtgcccggggtaactcggaacagacgcccaatcag
acgcagcacaagcaaagaccacaggccactgcagagcaaatcagattggcgcagatgatc
tcagaccaaaacgatgcagatttcgaggagaaagtaaagcagttgatcgacatcacaggc
aaaaatcaagacgagtgtgtgattgcgctgcacgactgcaatggagacatcaaccgggct
atcaatgtcttgctggagggcaacccagacacgcactcctgggagatggtggggaagaag
aaaggggtttctggacagaaggaagctggacagacagagcccagcgaggaggtccgagag
aacagagaccgggagcgagattacagccgaaggcgtgggggagctccaaggagggggaga
gggggaagccgtgggcgagagtttcgggcacaggagaacggtttggagggaggaaaaact
gggggatcatctggcagaggaacggaaagggggcgccgtggtcgtggaagaggcagaggg
ggttctggaaggaggggtggccgcttttctgcgcagggtatggggggcactcggggaagt
ccttgttgtcactcgcccatgttgcttttcaggacatttaacccggcagactatgcggaa
ccatcaagcacagaggacagttatggcaacagcagcacgtggaacagtacaactaatttt
gaacctgatgatggaacaagacatgattacattgggggtgaggggtcaaattatccccga
gaattttccactgctcctggtatgatatatccaggtgcttggaggactgcgactgaagag
tggggcacggaggactggaatgaagatctctcagaaacaaaggttttcacagcttccagt
gtatcctcagtgcctgtcccctctgagaatgtgaccatcaccgcaggccagaggatcgac
ctggccgtgttgctggggaaaagtccgtcatctttagagaatgagacgtccagccttgaa
tctaatcggaacaccgcaccgtctcaggccgggcctatcgtattcagcaactccaagcag
aaccccgtctcgcagaccagtcctgggagcagcttctcccatcacaccatggtcagcatg
ctgggtaagggcttcagtgacagcgagcctaaaggtggtactactacaggctcccagttc
ctagagcagttcaaaactgcccaggcccttgcccaactggcagctcaacattcccagtcg
gaagcaaccggtaacacctcctgggaccttggtgctgcatcacagtccccctcacttggg
cagtatgatatgaagaggtcgtctgacccgttcagcaagcgtccaagctttccccaggcc
tccaccatgatggaagtgtatctgcaagagaagcagcctgtggttagcacctcctccgct
gtgtctgtatgtccatcttctcctctcactggcaaaagcaacactgcccccccgatgtct
ccggtgtcttcagagaaccagtctagcagcccccagcctgctcagcaaaagatgaagcag
cagaaaaagaaagcatcgttaacatcaaagatacctgctctggcagtggaaatgcctggc
tcttctgacatctcagggctaaacctgcagtttggagccttgctgtttggatcggagcct
gtcctcccagaatacgaatcttcgcccactacaaacgtggctgtgagccagtcccaaaac
agcctttataccagtcctgtaagtgaatcccctaacaccatcacagccaatcagagccca
gagtctgcctatcagggcagcagcagtatacagtctgcaacatttaactctctgagcagc
actcaaggcccagtgtatgaacagagggccacacagacccggcgataccccaaccccatc
acctcatcttcctcatcctccccacagaaagacctcagccagtccaagaatgggttcagc
tccgtgtcggctcctacgttgcaagcccctgtgtcagtcgaagttccctctgtgcccacc
gtgaaggcagattcaccctctgcttccagcattgtccctctcagcgacccagtgtctaca
tcctccctcctcaccacggccggaccccattcctcacaaatcagcagcctcgctcactct
gaggatctgcaaagtgcccccacaacactcagcacattatcttcccaacatcagacctcc
acctcctcgtcctctgtaagaacttcagtatcgacgcctctgcataccagcgtggatacg
gaaaccagcatgcacccgtctgttaccaccttctcctcagcctccagcacagtccccacc
actccgtctgcccctgcctcttccagtatcaatgtggggaacctggtgcttggcctgagc
agcagctccaccatagccccatccacacgcagctccattgcaaccacttcaggtaaagca
cccccaaatctgcctccaggtgttcctccactgctaccaaacccatacatcatggctccc
ggtctgttacatgcctatcctccgcaggtatatggttacgaggaccttcagatgctgcag
acaaggttcccattggattattatagcatcccattccccacgcccagcgctccgcttact
ggaagagatgggagcctggcaaataacccgtactcaggtgaccttgccaagtttggccgt
ggagatgcctcctccccagctcctgccacaacactggcccaacctcagcagagccaagcg
cagggacaccacaccacacaacaaacattccttaacgccgctctacccccaggctacagc
tacaccagcttgccctactataccggcgtacccgggattcccagcactttccagtacggg
ccggccgtgtttccagtggctcctacctcttccaaacagcacggggtgaatgtcggcgtt
aacacatcagccgccgctttccagcaagcgcccagctatggctcccatggatacaacacg
ggctttgatgacatgggccaggtttccagcgtgggggatttctgtaaagttgcatttagt
ggggcttctgctgctgctcagaataaagctgctgctgtcgccaccaatggaccaggcgct
ggggtgtcggtgacttccagcaacacaggagtccctgacatttccggctcggtctactcc
aaaacgcagcagtcctttgagaagcaggggttccacacgggcacaccggccacatcattt
aaccttccctctgccctggcaagcgcgggccccatcaacccggccacagcagctgcctac
caaccggctcccttcatgcacattctggctccgcaccagcagcctcactctcagatcctg
caccaccacctccagcaggaggctcagctgccctatatgcagattttgtgttaccacctg
ctgcaggatgatcagagcggcgccggacagcggaaccaaggtgcctccatgacgcagaaa
tcccaagccagcaaatcggcctacagcagctacagctgggggagcaactag

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