Xenopus laevis (African clawed frog): 108700414
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Entry
108700414 CDS
T01010
Symbol
lingo4.S
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108700414 (lingo4.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
108700414 (lingo4.S)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_9
ig
LRR_5
V-set
Ig_2
Ig_6
Motif
Other DBs
NCBI-GeneID:
108700414
NCBI-ProteinID:
XP_018089067
Xenbase:
XB-GENE-17342680
UniProt:
A0A974C594
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Position
8S:complement(102279665..102281988)
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AA seq
628 aa
AA seq
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MVVGRNTPMPSFHLDPRVFIMCIGVLIRALCSCCPAPCECPTGDNSTLCRRRFLNMVPSN
IPIFSQKLDLSHNYIRTVPSNVFTYLKYLQELDLSYNQLSRVEPGLFSSLPALRLLLLHH
NELKLLPPGIFLGMPALSWLDVRGNQLVILLDQTFQGLRELKHLETGENPLLFISPGAFL
ELPQLQRLGLEETKLNTVPSSSLTALLRLSELRLGGISNSILRDLSFPNLPLLRVLEMDC
WPSLVFLEPHSLSGLNLSSFSVTHGNLTTIPQEALKAQVYLRTLDLSYNPISELPVRGLS
TLRRLEELRLSSGRLRYVPSAAFYGLGHLRMLDLSDNPLTWLAEDALPSPLGGLETLLLS
NTMLSCDCRLCWLLHRRLSFGGKSPICAAPDSLKGMVIPDDPDKLCPDLFTCEPPRIVNP
GPRELKVREGDILNISCNSLGVPKPSIQWVLPQFEDIRTTEIVSACPTTRLPYNISAQTV
FPTRDAQEIPDQTVQVPTPAMPAAKRVTILPDDTLQFHPVKTEDEGAYLCVASNVVGNDS
TWVHLKVMPFNGSNVPSSVAILNGHLLVVITAGGILPFISSVTLCFIFMFLWSRGRGNIK
HRAHIEYVPRGNRGSIDTEENKFTMKLL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgggaaggaatactccaatgcctagcttccatctggacccccgagtctttatt
atgtgtattggagttttgatcagagccctctgctcctgctgccctgccccctgtgagtgt
cccactggtgacaattccaccctttgtcggcgccgtttcctgaatatggttccctcaaac
attccaatattttctcaaaagctagaccttagtcacaactacatcagaacagtgccatcc
aatgtcttcacatacctcaagtatctccaagaactggacttaagttacaatcaactttct
agggtggaaccaggacttttcagcagtttgcctgcactgagactcctgcttctccaccat
aatgagctcaaactgttgcctcctgggatcttcttggggatgccagcactgtcatggtta
gatgtcaggggaaaccagttggtcatcttgctagaccaaacttttcagggtcttagggaa
ctgaagcacctggagactggtgaaaaccccctgctcttcatatctcctggtgcttttttg
gaattgcctcagctgcaaagattgggtttggaggaaaccaaactcaatactgtcccctca
agttccctcaccgcactactgcggctttccgaactgcgtttgggtggaatcagcaacagc
attcttcgagacctttccttccccaatttgccattgctgcgagtgctagaaatggactgc
tggccgtctttagtgtttctggagcctcacagtctgtctggtttaaatcttagctccttt
tctgtaacccatggaaatcttaccacaatcccacaggaagccctaaaagcccaggtttac
ctccggacgctggacctttcctacaacccaatctctgagctcccagtcagaggtttgagc
acactgagaaggctggaggaactgaggttgagcagtgggaggctgcgttatgtaccttct
gcagccttctatggcctgggacacctccgcatgcttgatctttcagacaatccactcact
tggcttgcagaggatgccctgccttctcctctaggaggcctggagactcttctcctctct
aataccatgctgtcctgtgattgcaggctctgttggcttctccatcgtagacttagtttt
ggggggaaatcccccatatgtgcagctccagactcactaaaaggaatggtgatccctgac
gatcccgataaactttgcccagacttatttacatgcgagcccccaaggatagtaaatcct
ggaccacgcgagttaaaggtcagagaaggagatatactaaacatctcctgcaacagtttg
ggagtccctaaaccttctatccaatgggtgctaccacaatttgaggacatcaggacaaca
gaaatagtaagtgcatgtccaactaccaggctgccttataacatatcagcacaaacagtc
tttccaaccagagatgctcaggagatacctgaccagacagtacaggtaccaactcctgca
atgccagctgccaagagggtcaccattctcccagatgacactcttcagtttcatcctgta
aaaacagaggatgaaggggcttatctttgtgtggccagcaacgtggttggaaatgactca
acctgggtgcatctgaaagtcatgccttttaatggcagcaatgtgccctcttcagtggcc
atactgaatggtcacctcctagtggtcataacagctggtggcattctgcccttcatcagc
tccgtgaccctgtgcttcatcttcatgttcctttggagccggggaagggggaacatcaaa
cacagagctcacatagaatatgtgccacgggggaaccgaggatcaatagacacagaggaa
aacaaattcacaatgaaactgctctaa
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