Xenopus laevis (African clawed frog): 108700547
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Entry
108700547 CDS
T01010
Symbol
pasd1.S
Name
(RefSeq) neuronal PAS domain-containing protein 2
KO
K09026
neuronal PAS domain-containing protein 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108700547 (pasd1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108700547 (pasd1.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
bHLH_IRO3
TED_2
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
108700547
NCBI-ProteinID:
XP_041430920
Xenbase:
XB-GENE-17332400
UniProt:
A0A8J1LQC3
LinkDB
All DBs
Position
8S:66875537..66941643
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AA seq
891 aa
AA seq
DB search
MDEDEKERTKRASRNKSEKKRRDQFNVLIKELCTMLQGHGQPLKMVKTTILQKTIDFLQK
QKEITAQTEACEIRQDWKPSFLSNEEFTQLMLEALDGFLIALNTDGIIIYVSDSVSSLLG
HLPSDMVDQNILNFLPEREQAEVLKLLASHILMTEPIIPEYFNNEKQVEFCCHLARGSLN
PNEPRMYEFVKFVVDFKFCNNVPTSSYNGFESAVARAFRSGNEEQICLVATVRLVTPQFL
KELCNIEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHAEDLELLAK
CHEQLIQCGKGKSCYYRFLTKGQQWIWLQTHYFITYHQWNSKPEFIVCTHTVVSYAEVRA
EKRRDLGLEESALELSETSMKPQNTYLAIKHTNQEASREMMSVSSHSSRISSRTALSDSA
STSSMRITEASTSSRRSLSVNQQENPQNRMAPNSNQSIGTTQVSSGNLSQHHVVHSTVPT
QQAIMPVYHYPSPAQFEIEEHMKEQLQERTRMLQDDIRTQQMELDVIKEQLQRIDDSNQQ
LPQPIPMGYSNLEHQPDPRRVSHQPSGEPRHSVDSTKKSQSMMAAKRFCVSSVAVQHQYR
TTAQNTQHQQTQQPPLQQHLQQSPLQQQQNALQQQQDALQQQQNDLQQQQDDLQQQQDAL
QQRRQQQLQQKQQLQLQKQQLQKQQQQLHKQQQLQKQNQIQIHQQQRLIRGNQSQQTVTL
PVQTSNNIVMPLYSNAMFSQAHPTVVTSRVPAETRDRQQATEYKQDRHLRFDQEQQLQPP
SLHMQPITCSTVIAVQPPPAYTPSVMIPHSSFSTQQSHLSVHVHKCQQQQQVQPQHLYLQ
MQTSETVQTAHAQHIFQQPHMSQQSTMGYFLHPQQQNQSGNMADLPEMQLP
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgagaaagagagaacaaagagggcatcacgcaacaaatctgagaagaag
agaagagaccagtttaatgtcctcatcaaagaactctgtaccatgttacagggccatgga
cagccacttaagatggtcaagaccacaatattgcaaaagacaatcgatttcttacaaaag
cagaaagaaatcacagcacagactgaagcctgtgagattcgacaagactggaaaccttct
tttcttagcaatgaggagtttactcagttgatgttagaggctttggatggctttctgata
gcgcttaacactgatgggattataatttatgtgtcagacagtgtttcatcccttctcggt
catttaccgtcagatatggtggaccaaaatatattaaattttctgccggagcgggaacag
gcggaggtgctgaaacttttggcatcacacattctcatgacagagccgatcattcctgaa
tatttcaacaatgagaaacaagtggaattttgctgtcatttagcaagaggaagcctgaat
cccaatgagccccggatgtatgagtttgtcaaattcgttgtagattttaaattctgtaat
aatgtgcctacatcctcctataatgggtttgagtcagctgtggcaagggcattccggtca
ggcaatgaggaacagatatgcctggtggccactgtacggttggtgacaccgcaatttcta
aaggagctttgcaatatagaagaaccttgcgaagaatttacatcacgacacagcctggag
tggaaattcctcttcctggaccacagggctccacctataattggctacttacctttcgaa
gtgcttgggacatcagggtatgattattaccatgcagaagacctggagctcttagcaaag
tgccatgaacaattgatacagtgcgggaagggcaagtcctgttattataggtttctaacc
aagggccaacagtggatctggctccagactcactacttcatcacgtaccaccagtggaat
tccaagcctgagtttattgtttgtacacacactgtcgtcagctatgctgaagttcgagca
gagaaaaggagagaccttgggttggaggaatcagctcttgagttatcagaaacttcaatg
aagccccaaaatacttacttagcgatcaaacacacaaatcaagaagccagcagagaaatg
atgtctgtctcatcccacagctctcgaatatcctcccgcacagcactatccgactccgcc
tccacatcgtccatgcgaattacagaagccagtacatcatcccggcgctctctgtctgtg
aaccagcaagagaatccccagaacagaatggctcccaattcaaaccagtcaataggaacg
actcaagtctcatcaggaaatctgtctcaacatcatgttgttcattctacagttccaact
caacaggcaattatgcctgtttaccattatccaagtccggcccagtttgagatagaagaa
catatgaaggagcagctacaagagagaactcggatgttacaggatgacatccgaacccag
cagatggagctggatgtgatcaaggagcagcttcagagaatagatgattctaatcagcag
ctgccgcaaccaatccctatgggatacagcaatttagaacaccaaccagatcctaggagg
gtgtctcatcagccatctggggagcccaggcacagtgtggactcaacaaagaagtctcag
agcatgatggcagctaaacgtttctgtgtgtccagtgtagctgttcagcaccagtatcgg
actactgcacagaatacacagcatcagcaaactcagcagccgccactacagcagcattta
cagcagagtcctctgcagcaacaacagaatgctttacagcaacaacaggatgctctgcag
caacaacagaatgatctgcagcaacaacaggatgatctgcagcaacaacaggatgctctg
cagcaacggcggcagcaacagttacagcaaaaacagcagctgcagctacaaaaacaacag
ctacaaaaacagcaacagcaactacataagcagcagcagctacagaagcaaaaccaaatt
cagatacatcagcaacaaaggctaataagaggcaatcagtcacagcagacagtgactctg
cctgtccagacttctaataacattgtaatgccactttacagcaacgcaatgttctctcag
gcacatcccactgttgtcacttcaagggttccagctgagaccagggatcggcaacaagca
actgagtacaaacaagacaggcacttaaggtttgaccaggagcagcaactgcagcctccc
tcattacacatgcagccaatcacatgcagtactgtgattgcagtgcaacctcctccagcc
tatacaccatcggtcatgatcccgcattccagtttcagcactcagcaaagccatctgtca
gtccatgtgcacaaatgccagcagcagcaacaggtccagccacagcatctgtatcttcag
atgcagacgtcggagactgtacaaactgcacatgctcaacacattttccagcagccacac
atgtcgcagcaaagcacgatggggtattttttacatcctcagcaacaaaaccaatctggg
aacatggctgacctacctgagatgcagctcccatga
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