Xenopus laevis (African clawed frog): 108700970
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Entry
108700970 CDS
T01010
Symbol
abca8.L
Name
(RefSeq) ABC-type organic anion transporter ABCA8
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108700970 (abca8.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
108700970 (abca8.L)
Transporters [BR:
xla02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
108700970 (abca8.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
DrrA1-3_C
RsgA_GTPase
SMC_N
AAA_29
AAA_22
nSTAND3
SRP54
DO-GTPase2
AAA_23
Motif
Other DBs
NCBI-GeneID:
108700970
NCBI-ProteinID:
XP_018090532
Xenbase:
XB-GENE-17338568
UniProt:
A0A1L8ETB2
A0A974BXR6
LinkDB
All DBs
Position
9_10L:19038581..19124446
Genome browser
AA seq
1616 aa
AA seq
DB search
MTDRTLRETSLFQQTMILFWKNLLLKWRRKWHTILEWLQNLAFVFLMFLVSVMGVSTFMQ
LEYNSPAEVLGRLDALNGSNHFKVGYVRTFATSKDIMEKVAKSIIIPDIKVQEYSDEEML
LNDMANRTVVGVTFVNNFSYHIRYPINTISYPNDYFAFMGFCASGSEACFPTYYWSRRFL
SLQASIDSAIIEMTSNHSVWDNMASIVTIRMRSTIASFKQYFHIGTFIFVMPMSYISLMY
LLSLYVTRERCEMRELLKMMRLKDLAFWLSWGLFYSFYILILANLMTVVTKALVLVQSSY
GIIMFLFFFYGIALMSFTFMLSALFRSPRATAIAGFFITLFLSALGLILLNKDIPKALEV
LLSIFPQFAFAVGLSESVHMESDIQGVSFSDMAGDSSHVLSSFISLALDSVFYMCLTVYF
EKVLADKHGAKYEPFFFLKSSYWSKEKLSPLRTQTEDSDESSMGKFFEKVPSDLQGKEAI
RINKVKKKYSDQDKNTEALRGLDLNIYEGQITALLGHSGAGKTTLLNILSGLCPASDGSA
TVYNYKLSDMLHLEEIKKRTGFCPQFDVKFNPLTVKENLTVFANIKGIPSKQIQHEVQKV
LSELQMNDIENVEAKNLSGGQRRKLTLGIALLGDPQVLLLDEPTAGLDPCSRHHIWTILK
EHKADRVTLFSTQFMDEADILADRKAVISNGRLKCVGSSLFLKRKWGVGYHLRMQVSPSC
DVEFMTSTMKQHVPNAKLTAHNEEELTYTLPFENMDAFPDLFLHLDGQVGNRIVNYGVSM
TTLDDVFLKLEGEGEIEKGDYGVFSPESGAPEDKDCFSADMDDSLLLMSDSGSATLTGLS
LWRQQVLAIARVRLLKLKHDSKTLRSILIFLALFIIPIIMTTIVKTIFNKVTVWELSASL
YFQQPQDRIHRYYTDLLICNNTGSSIEDFVGAVKEQNIAVYVTSGKYDMDTVKYRGAIEV
SQAEKGYSFTIVGNPKAQNALPVLVNIISNALLKIFSSPEHIRVWNNPVTEFWTEDFDSI
TFYSGFIFLLFASGLAPHFALSSIDDRKIKACTQLRISGIFPSAYWLGQALVDIALYWIL
LFLMVAILFSFNPQIIFSFIPAIVMITGILGYGASMVLYVYVISFVFGRGKSHHDGWSLF
FVLSAFIPMILMDFIQIHPVTIIIFFLLPASTLCGIVKCIDVYHFDRSTLEDEHLLYLFL
PYIHIFIFLVMLWGLERVFGMRKLKTNLFYRNKVLKNPEELDKDTDEEVLAERERVKKSA
TTNNMEEKPIIIVDSLRKEYKVKKGGSFFKKNRKAATKNISFCVRKGEVLGLLGPNGAGK
TTSIYMLAGEIRPTAGEVVLCGTDPAKSQNSYDSTGSLGYCPQDNPLWPNLTVKQHLEIY
AAVKGLKKKDADIAVKRVSEALELKEHLEKATRKLSLGVSRKVCFAISMLGNPSIVLLDE
PSTGLDPKGQQRLWRAIRAAFKNKDRGAILTTHYMEEAEAVCDRVAIMVSGKLRCIGSIQ
QLKSKFGKGYLLEIKVKDSHQVDQIHKEIIRIFPHAARQDRFSSLLVYKMPVDNVQSLSQ
AFLLLEEAKRAYNIEEYSFSQPTLEQVFIELAKEQEKEDFDLASTFQWKHLRTESI
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccggacactgagagagaccagtctgttccaacagactatgatattattctgg
aagaacctgcttctgaaatggagaaggaagtggcacacaattctggaatggctacaaaac
ttggcatttgtgttcttgatgtttctggtatctgttatgggcgtatcaacttttatgcag
ttggaatacaactcacctgctgaggtccttggccgcctggatgcacttaatggcagcaat
cattttaaagttggatatgttcgcacatttgctacatctaaggatattatggagaaggtt
gccaaaagcataattatcccagatatcaaagtccaagaatattcagatgaggaaatgctg
ctgaatgacatggcaaatagaacagtggttggagtcacgtttgtgaacaatttcagttac
catatcagatatccaatcaatactatttcatatccaaatgattactttgcctttatgggt
ttctgtgccagtggctctgaagcctgctttcctacatactactggtcaaggaggtttctt
tctctgcaagcaagtattgactctgctattattgaaatgacgagcaatcactctgtatgg
gataatatggcttccatcgtgacaataaggatgagatctactatagcttcatttaaacaa
tactttcatattggaacattcatattcgttatgcccatgtcctacatttctctgatgtac
ctcttgtccctgtatgtcacaagagagcggtgtgaaatgagagagttactaaaaatgatg
cgcctgaaagacttagcattttggttatcgtggggtctgttttattctttttacatttta
atcttggcaaacctgatgactgtagtcacaaaagctcttgtacttgtgcagagttcctat
ggcatcatcatgtttcttttcttcttttatgggatagctttgatgtcattcactttcatg
ctgagtgccctgtttaggagtcccagagcaacagccatcgctgggttttttatcacactc
tttctttctgctctgggcctcatactactaaacaaagatatccctaaagctcttgaggtc
ctattgagcatcttcccccagtttgcctttgcagttggattaagtgagagtgttcacatg
gagagtgatattcaaggtgtctctttctcggatatggcgggagattcttctcacgtgtta
tctagttttattagtctcgctctggattctgttttttacatgtgcctgacagtgtatttt
gaaaaggtccttgcagataaacatggagcaaagtatgagccattcttcttcctgaagtct
tcttactggtcaaaagagaaactgtctcccctaaggacacagactgaggacagcgatgaa
tcttccatgggcaagttctttgaaaaggtcccttctgatttacagggaaaagaagccata
agaatcaataaggttaagaaaaaatacagtgaccaagataagaacacagaagcattgaga
ggtctagatctcaatatctatgagggccagattacagccctgctcggtcacagtggagct
gggaaaaccacattactcaatatccttagtggactgtgtccggcttctgatgggtcggcc
actgtctacaattataaactctctgacatgctacacttagaagagataaagaaaaggact
ggattctgcccacagtttgatgtgaagttcaaccctttaactgtgaaggaaaatctaact
gtgtttgcaaatatcaaagggatcccatcaaagcaaatacaacacgaggttcaaaaagtt
ctctctgagctgcaaatgaacgacattgaaaatgttgaagctaagaatctgagtggtgga
cagcggagaaaacttacccttggaattgctcttttaggagatccacaggtcctgcttctt
gatgaaccaactgccggcttggacccatgttcccgacaccacatctggaccattttaaaa
gagcataaggcagatcgagtcacactctttagcactcaatttatggatgaagcagacatc
cttgctgatcgaaaggctgtgatctccaatggaagattaaaatgtgtaggatcctccttg
tttcttaagagaaaatggggcgtcgggtatcacttaaggatgcaagtgtctccctcatgt
gatgtggaattcatgacgtcaaccatgaagcagcatgttcctaatgcaaagctcacggcg
cacaatgaggaagagcttacgtacaccttgccttttgaaaatatggatgcatttccagat
ttatttttacatttggatgggcaagtaggaaaccgcatagtcaactatggagtctccatg
acaacactcgatgacgtatttctgaaactcgaaggcgaaggagagatagaaaaaggagat
tatggagtctttagccctgagtctggggcaccagaggataaagactgtttttcagctgac
atggacgattcacttttattgatgtcagattctggtagtgcaaccctcactggactctcc
ctctggagacagcaggtgttggctattgcgagggttcgcttgctaaaactgaagcatgac
tctaaaaccttaagatctatactgatatttttggctcttttcattatcccaattattatg
accaccatagtgaaaaccatttttaataaagtcaccgtttgggaactgagcgcaagtctc
tattttcaacaaccacaagatcgcattcacagatactacacagatctgctgatttgtaac
aacactggttcatctattgaagactttgttggtgcagtgaaggaacagaatattgcagtg
tacgtgaccagtggcaaatatgacatggacactgtaaagtacagaggagccattgaggtc
tctcaagctgaaaagggctacagtttcaccattgtgggaaaccccaaagcacaaaatgca
ttaccggtgcttgttaatatcatcagcaatgctcttttgaagatcttcagctcaccagaa
cacatccgtgtgtggaacaatccagtaactgagttttggactgaagattttgattctatt
acattctattctggttttattttcctgttatttgcatctggccttgcccctcactttgca
ttgagcagcattgatgacagaaagatcaaggcttgcactcagttgaggatttctgggatc
tttccatctgcatactggcttggccaagcgctggttgatattgctctttactggatcttg
ctttttctgatggtcgccatactgttttccttcaacccccagattatttttagctttatc
cctgctattgtgatgattacaggcatcctcggctatggagcttcgatggtcctttatgtt
tatgtcatttcctttgtttttggaagaggaaaaagtcaccatgacggctggtctctattc
tttgttctaagtgcttttattccaatgattttgatggatttcatccagattcaccccgtt
actataatcatcttctttctgttacctgcaagcacgctatgtggcatagtgaaatgcata
gatgtctatcattttgacagatcgacattagaagatgaacatctcctgtatctgttttta
ccatacatacacatcttcatattcttggtgatgctttggggcttggaacgagtatttggg
atgaggaaactcaaaacaaatctgttttacagaaataaggtcctgaaaaacccagaggag
ttggataaggatacagatgaagaggtgttggcagaaagagagagagttaaaaagtctgca
accactaacaacatggaagagaaaccaatcattatagtagacagtctgcgcaaggagtat
aaggtcaagaaaggaggatcgttttttaagaagaacagaaaagctgccactaaaaatatc
tccttttgtgtcaggaaaggtgaggtactgggattgctgggccccaatggagctgggaaa
accacttctatctatatgctggctggagaaataagaccaactgcaggagaggtagtgctg
tgtgggacggatccagctaaatctcagaattcctatgattctactgggtctcttggctac
tgtccccaagacaatcctctgtggcccaatctgactgtaaagcaacatttagaaatctat
gctgctgtgaagggcttgaagaagaaagatgcagacattgcagtcaaacgagtatcagaa
gccttggaacttaaagagcatctggaaaaagcaaccaggaaactgtctcttggcgtgtcc
agaaaggtgtgctttgctataagcatgctaggcaacccaagtatcgtactcctggatgag
ccttccactggtttggaccccaaaggtcagcagcgtctttggcgagccataagagcagcc
tttaagaataaagacagaggggcaattctgaccactcactacatggaagaagcagaagcc
gtgtgcgaccgagtggctatcatggtgtctgggaagctcaggtgcattggatcaatccag
cagctgaagagcaagtttggaaaaggctatcttcttgagattaaagtaaaagattctcac
caagtggatcagattcacaaggagataatacggatattccctcatgcagccaggcaggac
agattctcatctttgttggtgtataagatgccagtggataatgtacagtccttgtctcag
gcatttctacttttggaagaagctaaacgtgcttataacattgaggagtacagtttctcc
cagcccaccctggagcaggtgtttattgagttggccaaagagcaggagaaggaggatttt
gatctggccagtacatttcagtggaaacacctgcggactgaaagcatctga
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