Xenopus laevis (African clawed frog): 108701079
Help
Entry
108701079 CDS
T01010
Symbol
chd6.L
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108701079 (chd6.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108701079 (chd6.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
CHDCT2
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
108701079
NCBI-ProteinID:
XP_018090738
Xenbase:
XB-GENE-17342160
UniProt:
A0A8J0TUW9
LinkDB
All DBs
Position
9_10L:complement(44636899..44723078)
Genome browser
AA seq
2691 aa
AA seq
DB search
MIMKIQKQDQQLPSLKALSYSPMSSASIPCEHPILPSFSESTPQDFHSVTLLDPTSPLLD
DSDLYPNSGQEDCLPVQVTSINGMENSGGGGTGVKKKRKKKEPGEEKEAKPKKKKEPKKV
KEPKKVKEPSEAKIPKEQKQLKSPKEPKKPRKPREPKPPKEKKANQDSAAKTKPKKTSKE
QGPTPVEKKKKGKRKAEFSEESLDGESSLLNPASQSTEESTESLDSQKRRSGRQVKRRKY
NEDLDFKVVDDDGETIAVLGAGRASALSASTMAWQAEEPPEDDANIIERILASRISQKEF
MHGGMPVEVEEFYVKYRNFSYLHCKWATLEDLEKDPRIQQKIKRFRNKQAQMKHIFTEPD
EDMFNPDYVEVDRVLEVAHTKDSDTEEEVTHFLVKWCSLSYEESTWELEEDVDPVKVKEF
EVLQKVPELAPMERPASETWQKLVSSRTYKNNNELREYQLEGMNWLLFNWYNRKNCILAD
EMGLGKTIQSITFLSEIFFMGIRGPFLIIAPLSTITNWEREFRTWTEMNTVVYHGSQISR
QMIHQYEMHYRDEQGTPIPGFYKFHVVITTFEMILADCPELKKIRWSCVIIDEAHRLKNR
NCKLLEGLKLMALEHKVLLTGTPLQNSVEELYSLLNFLEPLQFPSESTFLEEFGDLKTEE
QVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFTFLTKGA
NQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKRHNPDALDFQLQAMIQAAGKLV
LINKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFC
KPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYR
LITRNSYEREMFDKASLKLGLDKAVLQDINRKGNTNGVQPLSKIEVEDLLRKGAYGALMD
EEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSSGNRTDISLDDPNFWQKW
AKIAELDTDGRNEKESLVIDRPRVRKQTKHYNSFEDDELMEFSELESDTEERPTRSRRLN
DKTRRYLRAECFRVEKNLLIFGWGRWKDILNLGRFKWHLNEKDMEMICRALLVYCVKHYK
GDEKIKSFIWDLITPTKDGHNQALQNHSGLSAPVPRGRKGKKLKNQMLLPEIKNADWLAS
CNPEIVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGDAASKVLEGENAKDLEVLLPD
IDYVEIPVDWWDAEADKSLLLGVYKHGYERYFAMRVDPALCFLEKVGMPDETLLTADGVN
DVASEIGDRSAIKEENNEEKANAQQEQDTNDSTGKEEKRDEESNIVEDMQAQDSSEPDKL
CWPVASALTARLRRLITVYQRCNRRDLARPEVLVSTNHSYWLQEEMARRAEMDPIMKEMQ
KRWTRREQADFYRTVSSFGVIYDPEKKCFDWTQFRALSRLDKKTDESLEKYFHSFVAMCR
NVCRLPLRKDDGSADPSLFLDPITEERAARTLYRIELLRKVREQVLRHPQLHECLKLCRP
SLYLPVWWECGKHDKDLLIGTAKHGLSRTDYYIMNDNQLSFLDAYRNYAQHKRNSGENMC
YHFQMNSKEHEPASCHLERTCESTKLSPDKEIKTEVEEASVPNETCSPPDLTCENFISQV
GDMISNNHDECSMSDSLMCMICDEKTCNSALLDPTNSALLDPSNSAQSALTQESFLGLEA
KNEPADYSLSKTKDDNILPVEEPVSRDCFLGSSEKDEPLEDIDTINEPFGDSGSHLGLVA
EDCEKAQVEAIGQRDLDDDNFCTSLSQTAEQSLGLDLEFLDKTFGDHSTLSPSINEDKDC
GLADEHSESPHLNPLPMQEKEEWGADLQELKEDPIVKWQNELNDMKDLPLEDTLKDQKVE
DLCIEKDSSTSKSSYCIPSLEVNDCVEMKHKTSLMLSGLLKQKVEDLKERIEGENVVEET
KVPLERNETIKLEDDEVKKEVKKENVEEECNCKEDSKNCGRMWMWRSETTDYLDKYTEED
VNACSLSVLEEAHQDFQDGRAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAVLKGK
WPSSSQQFEAQCMVPSTVLSTCTRSSSYTASEAQNLSYSNGSPVPHAQKETLSATTFPNE
ERKHRRPFEFDSERPDGKHRGMEHLSPPHGRTNSTLNGWRDAALELCREQTAGGGSSYSM
NTCTPKMAGISGLQSSLGMDLSGILQAGLIHPVTGQIVNGSLRRDESSLRRRRGRRKNVE
SMDLGFLKDRGMHAGILGLREMPNQQGSGHTESSIPASTRSALPGAKLQPEKVISNKSLL
EWLRQQSDCTIDIPTYGGSFSEKPKQRRQRCKDPGKPDFSLLAGDDRVSAINKDTGQQGY
LPESKFGRALSETLMHDAMPRRRGRRPRSELLKSAGSVGPDSPSGMGPLFMNGLIAGMDI
VGLQNMRNMQGIPLTGLVGFPAGFTTVSTNEEVKSTLSMLPMMLPGMAAMPQMFGVGGII
NSPISSSMATSLGSTIKSGTSHPEKAEDKDACPETKQDAAPSENSTGSFQEKSEPAVTTS
SHVAFNPFLIPGMSPSLLYPSMFLSPGIGMAIPGVQPNRLSESGGVDPQRRRRKKTKADS
QTSEQETVPFKESTEKEQHSPRAQNCDTNNMSASEKDQEDSGLKDTLDDTN
NT seq
8076 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagcaagaccaacagctgcccagtctgaaagcacttagctac
tcaccaatgtccagtgcctcgataccttgcgaacaccccatcctgccatcgttttcagaa
tccaccccccaagatttccactcagtgacacttctagatcccacctctcccctattagat
gattccgatctatacccgaactctgggcaggaagattgcttgcctgttcaagtgaccagc
atcaatgggatggagaatagcggaggaggggggaccggggtaaagaaaaaacgtaaaaaa
aaggagccaggggaggaaaaggaggctaaaccaaagaaaaagaaggagcccaagaaagtc
aaagagcctaaaaaggtcaaggagccctcagaggccaagatcccaaaggaacaaaagcag
ctgaagagtcccaaggagccgaagaagcctaggaaacctcgtgaacctaaaccacctaaa
gagaaaaaagccaatcaggactcggctgcaaagaccaaacccaagaaaacaagcaaagag
cagggaccaacaccagtggagaagaagaaaaagggtaagaggaaagcagagttctctgaa
gagagcttggatggagaatcatctttgctgaacccagcatctcaaagcacagaggagtca
actgaatctctggacagccagaagcgcagatcagggcgccaggtgaagaggcgaaagtat
aatgaagacttggatttcaaagtggtggatgatgatggagaaaccattgctgttttggga
gctggaagagcttcagcattgtcggcttccactatggcatggcaagcagaggaaccccct
gaggatgatgccaatataatagaaaggatcctggcttccagaatctctcagaaggagttt
atgcacggaggaatgcctgtggaagtggaggaattttatgtaaagtacagaaatttttct
tacctgcactgtaagtgggcaaccctggaagacctggaaaaggatcctaggatccagcag
aagatcaagcgctttcgaaacaaacaggcgcaaatgaagcacatctttactgagccagat
gaagacatgtttaacccagactatgtagaagtggaccgagtgctggaggtagctcataca
aaggactctgatacggaagaggaggtaacacatttcttggttaaatggtgttcactgtcg
tatgaagagtccacatgggaactggaggaggatgtcgatccagttaaagtaaaagaattt
gaagtgctccaaaaggttcctgaactcgccccaatggaacgaccggcttcagaaacctgg
cagaaacttgtaagttctcgcacttataaaaacaacaacgagctgagggagtaccagcta
gagggcatgaactggctgctcttcaactggtacaacagaaaaaattgcatcttggctgat
gagatgggtctgggcaaaacgatccagtccatcacctttctctcggaaatcttctttatg
ggcatcaggggcccctttcttataattgctcctctttccactattaccaactgggaacgg
gagttccgaacatggacagagatgaacaccgttgtctaccatggtagccagatcagccgc
cagatgatccaccagtatgagatgcactatagagatgaacagggaacacccattccagga
ttctacaagttccatgttgtgatcaccacgtttgaaatgattctggcagactgtccagag
ctgaagaagatccggtggagctgtgtgatcatagacgaagcacatcgtttgaagaataga
aattgtaagcttctggagggattaaaactgatggctctggagcacaaggtcctcctcact
gggactccccttcagaattctgtagaagaactgtatagtctgcttaatttcttggagccg
ttgcagttcccatcagaaagcacctttctggaagaatttggagatctcaaaacagaggaa
caggtgaagaagctgcagtctatccttaagccaatgatgcttcgaaggctgaaagatgac
gtggaaaaaaacttagctcccaaacaggagactatcattgaggtagaactgaccaacatc
cagaagaagtattaccgggccatccttgagaaaaacttcacattcctgaccaaaggggcc
aaccagcacaacatgcccaaccttatcaacaccatgatggagctgcgtaaatgttgcaac
catccatatctaataaatggtgcagaggagaagattctggaggatttccgcaagcggcat
aacccagacgcacttgatttccaactccaggccatgatccaagctgctggaaaactggtg
cttataaataaacttcttcccaagctcatcgcaggtgggcataaagttctcattttctcc
cagatggtgcgctgcctcgacatcctggaagactatcttattcagaggcgatatacttac
gagcgaattgatggcagagttcgaggtaatctccgccaggcagctattgatcgattctgc
aaaccagattcagaccgctttgtcttcctgctgtgcacaagagccggaggcttgggaatt
aacttaactgctgctgacacctgcataatctttgactctgactggaacccacagaacgac
ttgcaggcacaagctcgctgccatcgcattggacagagcaaagctgtcaaagtgtatcgt
ctcataaccagaaattcatatgagcgggagatgtttgacaaagcaagcttaaagctgggc
ctggacaaagctgtacttcaggacatcaacaggaagggaaacactaatggggtacagccc
ctctcaaaaattgaggtggaagatcttctgagaaaaggtgcctatggagctctgatggat
gaagaggatgaaggttccaaattctgcgaggaagatatagatcagatccttcagcgaagg
acacaaaccatcactattcagtccgaagggaagggctccacatttgctaaggccagcttt
gtgtcttcaggcaatagaacggacatctctttggatgatcccaacttctggcaaaaatgg
gcaaaaattgcagagctcgatacagatggtagaaatgagaaggaaagccttgtgattgat
cgaccccgtgtcaggaagcaaaccaaacactacaactcctttgaggatgatgagctgatg
gaattctcagaactggaaagtgacacggaggagagaccaacaaggtcccggaggctgaac
gacaaaacgaggcgttacctccgggctgagtgcttcagagtggagaaaaatctcctcatt
tttggctggggtcgctggaaagatatcctgaaccttggccgctttaaatggcacttaaac
gagaaagacatggagatgatctgcagggcactcttggtttactgcgtgaaacattacaag
ggagatgagaaaatcaaaagcttcatatgggatctgatcacccccacgaaggatggacat
aaccaagcacttcagaatcattcaggtttatctgcgcctgttcctcgtggaaggaaagga
aagaaattgaaaaaccagatgctgttgcctgagataaagaatgcagactggctggccagc
tgtaacccagagatagttctgcatgatgacagctacaagaaacatctcaagcagcactgc
aacaaagtcctcctgagagtgcgtatgttgtattacctcaaggctgaggtattgggagat
gctgcaagcaaagttttggagggagaaaatgccaaagacctggaggtattgttaccagat
atagattatgtggaaataccggtggactggtgggatgcagaagctgataaatctctcctg
cttggcgtttacaaacacggatatgagaggtactttgccatgcgggtagatccagcactt
tgtttcctggagaaggtaggaatgccagacgagaccttgctcactgcagatggagtaaat
gatgtggcttcagaaattggagatcggagtgcaattaaggaagaaaataatgaagagaaa
gcaaatgcacaacaagagcaggatacaaacgacagcactggaaaggaggaaaagagagat
gaggagagcaatatagttgaggatatgcaagcccaggatagctctgaaccagacaaactg
tgttggcctgtagcatcagctcttactgcacgacttcgccgattgatcactgtataccag
cgatgcaaccgcagggacctagcgaggcctgaggttttggtttctaccaaccacagttac
tggttacaggaggagatggccagaagagcagaaatggaccccatcatgaaggaaatgcag
aaaagatggaccagaagagagcaggcagacttctacaggacagtgtcctcgtttggtgta
atatatgatcctgagaagaagtgctttgactggacccagtttcgtgctttgtctcgtctt
gataagaagaccgatgaaagcctagagaaatatttccacagcttcgtcgctatgtgcagg
aatgtctgccgccttccactcaggaaagatgatggttccgctgacccctctcttttcttg
gaccccataacggaagaacgagcggcaagaactctgtatcgtattgagctactgaggaag
gtcagagaacaagtgctaaggcacccacaactccatgagtgtctgaaactgtgccgacca
agcctttatcttccagtgtggtgggagtgcggcaaacatgataaagatctactgataggc
actgccaagcatgggcttagccgtacagattactatataatgaatgacaatcagctgtca
tttttagatgcctataggaattatgcccaacataaaaggaatagtggggaaaacatgtgt
taccatttccagatgaattccaaggagcatgagccagcttcttgtcatttggaaaggaca
tgcgaatccacaaagctcagtcctgataaagaaattaaaacagaagttgaagaggcttct
gttccaaatgaaacctgcagccctccggaccttacttgtgaaaactttatttctcaagtc
ggagatatgatctcaaacaaccatgacgagtgctctatgtcggattccctcatgtgcatg
atatgtgatgagaagacttgcaatagtgcactgttagatcctaccaacagtgcattgtta
gatcctagcaacagtgcacaaagcgctctcacccaggagagttttttggggttggaagct
aagaatgagccagctgattattcactgagcaagactaaagatgataatatattgcctgtt
gaggagcctgtgtctagagactgtttcttgggaagcagtgaaaaggatgagccattggaa
gacatagatacaataaatgaaccgtttggtgattcagggagccatcttggtttggtagca
gaggactgtgagaaagcacaggtggaagccattggacagagggacttagatgatgataac
ttttgtacatctcttagccagaccgctgaacaatctttaggtctagaccttgagtttcta
gataaaacgtttggtgaccattcaacactgagccccagtatcaatgaggacaaagattgt
gggttagctgatgaacattccgaaagcccacatttaaatccattaccaatgcaagagaaa
gaggaatggggggctgaccttcaggaactaaaagaggatcctattgtgaaatggcaaaat
gagctaaatgacatgaaggatcttccactggaggacacactaaaggaccagaaggtagaa
gacctctgtatagaaaaggatagctcaacatcaaagagtagttactgcatcccttctttg
gaagtcaacgattgtgtggagatgaaacacaaaaccagccttatgctttctggactctta
aagcaaaaggttgaagacttgaaagagagaattgagggagaaaatgttgtggaagaaacc
aaggttccattggagagaaacgaaacaatcaagcttgaggacgatgaagtgaagaaagaa
gtgaagaaagagaatgtggaggaagagtgcaactgcaaagaagacagcaagaattgcggc
aggatgtggatgtggaggtcagaaaccacagattatcttgataaatacacagaggaagat
gtaaacgcttgttccctgtctgttcttgaagaagcacatcaggattttcaagatggccgt
gctccaaccattgctcaacttttgcaggagaaaacactctattccttttctgaatggccc
aaggatcgagtgatcataaaccggatagacaacatctgtcacgcagtgttgaagggaaaa
tggccctcctccagccaacagtttgaagcccagtgtatggtgccgtccacggtgctgagt
acatgtacaagaagcagcagctataccgcttcagaagcacaaaatctgtcttacagcaat
ggttctcctgtgcctcatgcccagaaagagactttatcggcaacaacttttccaaatgag
gaaaggaagcacagaaggccatttgagtttgacagcgagaggcctgatggcaaacacaga
ggcatggagcatctcagcccaccccatggtcggactaattccacactaaacggctggaga
gatgctgccttagagctgtgcagggagcagactgctggcggaggctcttcctactccatg
aacacctgcacacccaagatggctggcatcagtgggctacagagctccttggggatggat
ttgtcagggattctgcaagccggactgatccatcccgtgactggacaaattgtgaatggg
agcttgaggagggatgagtcctctttgcgtaggagaagagggaggagaaaaaacgtggag
agcatggatctgggtttcctaaaggacaggggcatgcatgctggaattctgggactcaga
gaaatgccaaaccagcaaggctctgggcacacagaaagctccatccctgcctctactcgt
tctgctctccctggagctaaacttcagccagagaaagtaatctccaacaaaagcctcctg
gagtggcttcgacagcagtcagattgtactattgatatcccaacttatgggggtagcttt
tcggagaagcccaagcagaggagacagcgctgcaaggaccccggcaaaccagattttagc
ttgctggcaggggatgaccgtgtgtcagcaattaacaaggacacagggcagcagggatat
ctcccagaaagcaagtttggcagagcgctgtcagagacgcttatgcatgatgccatgccc
aggaggcgaggcaggcggcctcgaagtgaactgcttaaatctgcaggatctgtgggccct
gattctccttcgggcatggggcccctttttatgaacggtctaattgctgggatggatata
gtgggattacagaacatgaggaatatgcaagggatcccattaactgggctggttgggttc
cctgctgggtttactacagtctccaccaacgaggaagttaaaagcaccttaagcatgtta
cccatgatgctccccggcatggccgctatgcctcagatgttcggtgtcggagggattatt
aactctcccatctcatcatcgatggcaacttctttaggaagcacaattaaaagtggtacc
tcacaccctgaaaaagctgaggacaaagacgcatgcccagaaactaaacaagacgctgca
ccttctgaaaactctactggatcctttcaggagaaatcagaacctgcagtgactaccagc
agccatgtagctttcaacccattccttatccctggcatgtccccaagtctgctgtaccct
tccatgtttttgtcgcctggaattggcatggccataccaggggttcaacccaaccggctt
tcagagtcaggtggcgttgatcctcagcggcgaaggaggaagaagacaaaagcggactcc
cagacttccgaacaggagactgtgccctttaaagaaagcacagaaaaagagcaacactcc
cccagagctcagaactgtgacacaaataatatgtcggcatctgagaaagaccaggaggat
tctggtttaaaagatactctagatgataccaattag
DBGET
integrated database retrieval system
