Xenopus laevis (African clawed frog): 108701087
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Entry
108701087 CDS
T01010
Symbol
soga1.L
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108701087 (soga1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108701087 (soga1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
108701087
NCBI-ProteinID:
XP_018090766
Xenbase:
XB-GENE-6487406
UniProt:
A0A974BXY9
A0A1L8EU89
LinkDB
All DBs
Position
9_10L:complement(45489109..45551258)
Genome browser
AA seq
1617 aa
AA seq
DB search
MEPGGPAGATTPPPAPEKKKKMNRAPSPARPKELSGWSLSKTRRSSPASLSVLPPGPRRP
LPSPGTKKQPGPRPGGKSKSQGAPGPRTDSSSEGSCASEESSGTSRGASSEEGGAGSGTS
SRLQCSTSMAFSDLTEDLIDGGTEGLLREMEELRSENDYLKDEIEELRSEMLEMRDVYME
EDVYQLQELRQQLEQVHKTCRIFQYRLKKAERRGLRVAQTGHVDSELISTLEQDVKVAKD
VSVRLHSELEAIEKKRTKLEEENEDLRQRLIETDLAKQVLQNEMEKMKENSLKKRRTSGR
IDKKPSVQEDSSDLKCQLHFAKEESALMCKKLTKLAKDNDHMKEELRKYRSMYGDMDSSL
SVEEFANSPHSREAEVKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDEMKIHHDRELL
SQDGSRFPFTSGESGDNFVELRRHLQFVEEEAELLRRSMMELEDQNKLLMNELNKYKSDH
DLDITLSEDSCSVISEPSQEELTTAKMQISELSGKVKKLQYENRVLLSNLQRYDLASCQT
TRPLMETDAEAGDSAQCVPSPLWREGPIGGETDAADSREQAGKGSTRSPNVNHSSPSKLL
KMKETLLGITAQAGLISKAIEVLKSDYNGFPSGLKLCTDNDCGDLLLTEAIDNSEVTSDA
KLISAIFSRLAVLQQELNCFTKKVDSLGVCCKEEIGSDAASTDTSKDSSKKEHCCNTQQP
ECRNLRQKEESRTEKQDGDHNCDQTKSYKTYQPDDNESYAAEIKDLQLVLSEANETIQGL
QEQLSQERELRKEDEMTYNQKIAQRKEDQEKLLLRREFELQSHGLQRRLEQKFWSQEKNV
LLQETHQFKQNFLLLFMKLKWYLQRWRQGKALPRDEDFLEVNSVKELYMLIEEEELNPPI
SDYKVSDGESWPQNVARESIKTLSDIKGTLKDLCNELQEERRGMNELQQQFAKAKAAWEM
EKMELKLDSGKHGVDRSTSDLKAALKREREEHQHLLTESYSAVMDLTKQLQVNEKNWTQE
KEELLNRFQDERKLADQQMRELQNKLKQKEADSWVIKEPERKSSCWKEAVSNNLQDKDID
CDTDASVTSLKRTKSVSSMSEFESLLDCSPFLHDNTSSVDGENAKGRRGLPASSLLANGS
KYPENHCSYESNDKSLAGHLSKGNLVISSWDYTMAKADNRVDGQKHIQRSYTAPDKTGIR
IYYSPPVVRRLDVPLVQNKEEKLMVETGFLFTMAKPKEPEKSDQLSGNSCSHWLCNFSKK
QRDLLDSDSVKDSSSVPGFPSSLGDFEISGNMSDDMKEITNCVRQAIRSSSLERKPKSTA
SQTVGLSSVGVQTVQMVSVSLQTDPIRSSLTSKSWSPRGSSLLSTRTKHISTSLDKVHSR
IDRPCCSPKYGSPKLQRRSSSKLDCSKDRSLWNLQQNKQNGSAWARSTTTRDSPVLNNIS
DGSSSLFNVVEHAGSSESIYRLGLGESRSKSDTPKYGIVQEFLRNVCGRTSQSSSAVSEK
KDTEDCNKRPDNHDHCSSVCHSSYNVSKLLSKKVPRQHTSDEQKPSIITQGCKEGSPKDS
DIISTSANEDYDCNCSSQPLTSCFSRPSRPHSRQAHYKCQLHPDPTVPEDKAGPACN
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggagggcccgcaggggccaccacccctcccccggctccggagaagaagaag
aaaatgaaccgggcgccttctccagcccgacccaaggagctgagcggatggtctctatct
aaaacccgcagaagctccccagcctccttgtctgtgctgcctccggggccccgccgcccg
ctcccctcaccgggaaccaagaaacaaccggggccacggcctgggggcaaatcgaagtct
caaggggctccggggccccggactgacagcagctcggagggctcatgtgcgtctgaagaa
agcagcggtaccagccggggagccagtagcgaggaaggaggcgcggggtcggggacctcc
agccggttgcaatgcagcacctcaatggccttctccgacctcaccgaggacttgatagat
gggggcactgaggggctcctccgggagatggaggaactgcgctccgaaaatgattatcta
aaggatgaaatcgaggaactgaggtcagaaatgcttgagatgagggatgtctacatggag
gaagatgtttaccaactacaggagctccgacagcagttagagcaggtccacaagacttgc
cgcatcttccagtaccggctgaagaaagctgaacgtagagggctgagggtggcacagaca
ggacacgtggacagtgagctcatctccactttagaacaagatgtgaaggtggctaaagac
gtctctgtgcggctccacagtgagctggaagcaatagagaagaagagaacaaagctggag
gaagagaacgaggatctgcgccaacgtctcatagagacagacttggccaaacaagttctg
cagaacgagatggagaagatgaaggagaactcactgaaaaagaggcggacgtctgggagg
attgacaagaagccatctgtgcaggaggacagctccgatctaaaatgccagctacacttt
gctaaagaagagtctgctttaatgtgtaagaagctcacaaaattagcaaaagataatgac
catatgaaagaagagctgaggaagtacaggtcaatgtatggtgacatggacagttcattg
tctgtagaggagtttgccaattcaccacattccagagaggcagaggttaaggtccacctt
aagctggtggaagaagaagccaaccttttaagccgaaggatcgtagagctagaggttgaa
aacaggggtctgagagcagagatggatgaaatgaaaatacaccacgaccgtgaactactt
agccaagatggcagcagattcccttttacctctggagaatctggagataattttgtggag
cttaggaggcatttgcagtttgtagaggaagaggctgagctcctcaggagatcaatgatg
gagttagaggaccaaaataagctactaatgaatgaactgaataaatataaatctgatcat
gacctagacatcactttgtcagaggacagctgctctgtcattagtgaaccttctcaagag
gaacttactactgctaagatgcagatcagtgaacttagtggcaaggtcaagaaactccag
tatgagaaccgagtgctcctttcaaacctccaacgttatgacttggcatcctgccagacc
acaaggcctttaatggagactgacgcagaggcaggagactctgcccaatgtgtcccatca
cctctttggcgagagggacctattggaggagaaacagatgctgcagactctagggaacag
gcaggcaaaggcagcactagatcgccaaatgttaatcactcgtccccatccaagttatta
aagatgaaagaaacccttcttggtatcacagcgcaggctggtttaataagcaaagccatt
gaggtcttgaaatctgattacaatggattcccatcgggcttgaaactgtgtacggataat
gattgtggggaccttctattgaccgaggctattgataacagcgaggtgactagtgacgct
aagctgatcagtgccattttttcaagacttgccgtgttgcagcaggagttgaattgcttt
acaaaaaaggtggattcactaggggtctgttgcaaagaggaaattggttcagatgcagca
tctactgatacctcaaaagactcttcaaagaaagaacactgttgcaatacgcagcagcct
gagtgtaggaacttgcgccagaaggaggagtctcgtacagagaaacaagatggtgaccac
aattgtgaccagaccaaaagctataagacctaccagcccgacgataacgagtcctatgca
gcagagattaaggacttgcagttggtactttctgaagccaatgagaccatccaaggactt
caggagcagctttcacaggagcgagagcttcgtaaggaggatgaaatgacatacaaccag
aagattgcccagcggaaggaagatcaggagaagctgctcttaagacgtgagtttgagctc
cagagccacggccttcagaggaggctggagcagaagttctggagccaagagaagaatgtg
ctgttgcaggagacccaccagtttaagcagaacttcctgctactcttcatgaagttgaag
tggtacctacagcgctggcggcaaggaaaagccctgccgagagatgaggacttcttagag
gtgaacagtgtcaaagagctatatatgctgattgaagaagaagaattaaatcccccgatc
tccgattataaggtgtctgatggtgaaagctggcctcagaatgtggccagagaatccata
aagaccttatctgacattaaggggaccctgaaggacctttgcaacgagttgcaagaagag
aggagagggatgaacgagcttcagcaacagtttgccaaagcaaaggctgcgtgggaaatg
gagaagatggaattaaagctggattccggaaagcatggtgttgatcgctcaacttcagat
ctcaaagccgccctgaaacgagagagagaggagcaccaacacctccttactgagtcctac
agtgcagtcatggaccttaccaagcagctgcaggtcaacgagaaaaactggacccaagaa
aaagaagagctcctaaacagattccaagatgaacgcaaacttgccgaccagcagatgcgg
gagctgcagaacaaacttaaacagaaggaagcagattcctgggtgataaaagagccggag
aggaagagcagctgctggaaggaggctgtcagtaataatcttcaggataaagacattgac
tgtgacaccgatgccagtgtgaccagtttaaaaaggaccaaatctgtatcttccatgtca
gagtttgaaagtttactcgattgttccccctttctgcatgacaacacatcctcggttgat
ggcgaaaatgccaaagggaggagaggtctaccagcttcttcacttttggccaatggttct
aaatatcctgaaaaccattgttcctatgagagtaatgacaagtccttggctggacatctt
tccaagggtaacctggtgatttcatcctgggattatactatggccaaagctgataatcgt
gtggatgggcagaagcacatacagaggagctatacagcaccagacaagacgggcattcga
atttattatagcccaccagtggttcggaggcttgatgtgcctttggtccaaaataaagaa
gaaaaactcatggtagaaactgggtttctgtttaccatggccaaaccaaaagaaccagaa
aaatcagaccagttatctgggaattcgtgtagccactggctttgtaatttctccaaaaag
cagcgggatttgttggatagtgattcggtaaaggactcttcttctgtcccagggtttcca
tcttccctgggggattttgagatttctggtaacatgagtgatgacatgaaagaaatcaca
aattgtgttcgacaggccattcgctcaagctccctagaaaggaaaccaaagagtacagca
agccagactgttgggctgtccagtgttggtgttcagactgttcagatggttagcgttagt
cttcaaactgatcccattagatcaagcctaacttcaaagagctggtcaccaaggggttct
tctctgctgtctactagaaccaaacacatttcaacatcattggacaaagttcactcaagg
atagaccggccttgctgttctcccaagtatggttcccctaagcttcagagaaggtcatct
tccaaactagattgttccaaggatcggagcttgtggaatcttcaacaaaataaacaaaat
ggttcagcttgggcgaggtcaacaacaactcgggacagtcctgtcctcaataacatcagt
gatgggtcatctagtttgttcaacgtggttgaacatgccggaagttctgaatccatctac
agattgggccttggggaaagcaggagcaagtctgatactcctaagtacggtattgtgcag
gagttcttaaggaatgtgtgtggccgaacatctcaaagctccagcgcagtgtctgagaag
aaagacactgaagactgcaacaaacgacctgacaaccatgaccactgttcttctgtttgt
cactcctcctataatgtgtctaaactactgagcaagaaggtaccaaggcagcacaccagt
gatgaacagaagccttcgatcataactcaggggtgcaaagagggaagtcctaaggactcc
gacattatttctacatctgctaatgaagattatgactgtaattgcagttcacagcctctc
acgtcctgcttctccaggccatccaggcctcactcacgccaagctcactacaagtgccag
ctccacccagacccaaccgtcccagaagacaaagcgggccctgcctgtaattga
DBGET
integrated database retrieval system
