Xenopus laevis (African clawed frog): 108701105
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Entry
108701105 CDS
T01010
Symbol
ush1g.L
Name
(RefSeq) Usher syndrome type-1G protein homolog isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108701105 (ush1g.L)
Cilium and associated proteins [BR:
xla03037
]
Primary cilia and associated proteins
USH complex and associated proteins
108701105 (ush1g.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
SAM_2
SAM_EPH
SR-25
Motif
Other DBs
NCBI-GeneID:
108701105
NCBI-ProteinID:
XP_018090802
Xenbase:
XB-GENE-6488268
UniProt:
A0A8J0TLE4
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Position
9_10L:complement(46550712..46571502)
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AA seq
465 aa
AA seq
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MDGRYHRAARDGFLDLLKEATRRDLNSPDEDGMTPTLWAAYHGHLGALRVIVSRGGDPDK
CDIWGNTPLHLAAANGHLNCLSFLVSFGANIWCLDNDYHTPLDMSATKGHMECVRYLDSI
AAKQTGLNPKLVSKLKERAFREAEKRIRDCAKLQRKHHERMERRYRRDMSDHSDTMSFSS
FSSSVSQRYPSATMLSTMPYSHAAGTTKGKTKIQKKLEKRKQTDGTFKIYEDGRKSMRSL
SGLQLGNDVMFVKQGTYASPRERGRQHLRDMFLPEEDSLSRAISDPGLHGGDSAHSEVST
DSGHDSLFTRPGLGTMVFRRNYLSSGLFGMGRDEGNGLQTGVGEEIKLRSRLKRSPSLDD
SIGSAGSLVVRNDQELPWEEEDLRLDDDEEPDTSPLESFLASLQMSDLVSVLQDEKIDLA
ALILCSDHDLKSIGIPLGPRKKILDGIQRRKQAVDRPSTMGDTEL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcgctaccaccgggccgccagggatggattcctggacctgctaaaagaagcg
acccggagggatctgaactccccggacgaggatgggatgaccccgactctatgggcggct
tatcatgggcacctgggggcactgcgggtcatcgtgagccgggggggtgatccagataaa
tgtgatatttggggaaacacccctctgcacctggctgctgccaatgggcatttgaactgc
ctttcctttttggtgtcctttggagccaacatctggtgtttggacaatgactaccatact
ccactggacatgtcagctacaaagggccacatggagtgtgttcgctatttagactcaatc
gcagccaagcaaactggcctcaaccccaaattggtgagtaagctaaaggaacgggccttc
agggaggccgaaaagcggatccgcgattgcgccaagctgcagcgcaaacaccacgaacgc
atggaacggcgatatcgaagggacatgtctgaccattccgacaccatgagcttctccagc
ttctcaagctcagtgagccagcgttaccccagtgccacaatgctttccaccatgccatat
tctcatgctgcagggaccacaaaaggcaagacaaagatacagaagaaactggagaagagg
aaacaaacagatggaacattcaagatctatgaagatggcagaaagagcatgcgctcactc
tcagggctgcagctcggtaatgatgtcatgtttgtcaaacagggcacctatgccagcccc
agggagagagggcgccaacaccttcgagacatgtttttgccagaggaagactccctctcc
cgagccattagtgatcctggacttcatgggggtgattctgctcattcagaagtcagcaca
gattctggacatgattctctgtttaccagaccggggcttggtactatggtgtttagaaga
aactatctgagcagtggcctgtttggaatggggagagacgaggggaatggactacaaact
ggggttggagaggaaattaaattgcgcagccggttaaagcgatcaccaagtttggacgac
agtattggcagtgcaggaagtctggtggttagaaatgaccaggagctgccctgggaggaa
gaggacttaaggctggatgatgatgaagaaccagacaccagcccactggagtctttcctg
gcctctcttcagatgtctgatctggtgtctgtattacaggatgagaagattgatctagca
gcccttatactgtgctctgaccatgacctcaagagcatcggcatccctctgggaccccgc
aagaagatcctggatgggatccaacgaaggaagcaggcagtagatagaccctctaccatg
ggagacactgagctataa
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