Xenopus laevis (African clawed frog): 108701118
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Entry
108701118 CDS
T01010
Symbol
itgb4.L
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04382
Cornified envelope formation
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
xla04810
Regulation of actin cytoskeleton
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108701118 (itgb4.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108701118 (itgb4.L)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108701118 (itgb4.L)
04810 Regulation of actin cytoskeleton
108701118 (itgb4.L)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108701118 (itgb4.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108701118 (itgb4.L)
04515 Cell adhesion molecules [BR:
xla04515
]
108701118 (itgb4.L)
04090 CD molecules [BR:
xla04090
]
108701118 (itgb4.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108701118 (itgb4.L)
Exosomal proteins of bladder cancer cells
108701118 (itgb4.L)
Cell adhesion molecules [BR:
xla04515
]
Integrins
Integrin beta subunits
108701118 (itgb4.L)
CD molecules [BR:
xla04090
]
Proteins
108701118 (itgb4.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
EGF_integrin
Ig_DSCAM-DSCAML_C
I-EGF_1
PSI_integrin
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
EGF_2
SEA
CRLF2-like_D2
Motif
Other DBs
NCBI-GeneID:
108701118
NCBI-ProteinID:
XP_018090819
Xenbase:
XB-GENE-17343651
UniProt:
A0A1L8EUE6
A0A974BYE1
LinkDB
All DBs
Position
9_10L:47249523..47295388
Genome browser
AA seq
1770 aa
AA seq
DB search
MLNPHVLGGLLLVVLLLGLPSTQSQSNKYNLCVASRATSCSACIRADKGCSYCADEGFSS
VRCDLAENLKRFGCSERGIVYMRSEVQTQQNYEINTLVSKTQVAPQRMSMRLRAGEETSF
NLQVFEPLDTPVDLYILMDFSHSMSDDLASLKNMGQELANVVSTLSKNYTIGFGKFVDKV
TVPQTDMRPEKLKQPWLDSTPPFSFKNVIQLTSDVEKFRSELMKEKISGNLDPPEGGFDA
ILQTAVCTNQIGWRKGSTHLLVFSTESAFHYEADGMNVLDGILKRNDEQCHLDASGYYTH
DTVQDYPSVPTLVRILAKNNIIPIFAVTDYSYSYYDKLSKYFKVSEIGELKEDSSNIVDL
LQEAFTQIRSRMDIRDDNTPRAMNISVSSETAKVTETGSFQVTRGEVGTFKVNVKALERV
GNQHVCDLPPQDQGSQIILKPSTFTDGLKIDASLICDSCPCELQKELNSAKCSFNGDFVC
GRCECRERWMGENCNCSSTDTKSTQSCIAPESKEICSGRGDCLCGTCQCHSESPSQQFQG
EFCQFNNFQCPRSLGYMCNDRGRCHMGSCVCDAGWEGESCQCPTSNQTCLDRNGGLCSNR
GKCVCGRCQCDIVSQYTDATCEFSYSLRQLGVCEDLRTCVQCQAWGTGEKKGKTCEACEI
SIKMVDELKKVDERTENCTFRDEEDDCTYEYAVDPNAVQGNYTVLVKNKKECPPGAFLWL
IPLLIFLMLLLGLLMLLCWKYCACCKACLAMLPCCGPGRSVGFKEDHYMLRQSLMSSDYL
NTPLVRSGNLKGGDTVRWKINNNVHRPPPSPGALNPKELVPYGVSMRLARLFTENLSKPQ
SRECTQLRQEVEDSLNEVYKVIPGTHKVKQTAFRLQSNAGKRQDHTIAETILMAPREAEP
EIVKVTEKHVTQEAFQDMKVTPGYYTVTSDRDAHGLVEFQEGVELVDVRVPLFMREEDDD
EKQLLVEALDVPTGIAQLGRKLVNITIIKEQAKSIVTFVKPAYTYNRQEQVARVPVSREI
IQNGKTQVTYRSQDMTAREGKDYTFSEGELTFQSNDTQSEILVPLLGRSEVDTLLGKRQV
KQFLLELSNPKYGAKIGKYPQCTITIDDTADVIQKAMPVQSVQSPSGKIGAPINLNGQAL
SARKIRLNWMPPPGKPTGYKVRYWIEGDSESDATVLDTKVPSAELVNLYPYCDYEMRVCA
YNAQEEGPYTDIVTCQTLEDVPSEPGRLAFNVISSTVTQLSWAEPAETNGDITAYEVSYA
MVNEDNKPIGPIKKVQIEGPKKRMVLIENLRESQPYRYTVRATNKAGWGPERDATMNLAT
QPTRPMSIPIIPDAPIIDAEAGEEYDSYLMYSNDVLRSPVGSKRPSVSDESEQLLNGRTD
FSFSGGSLNRAMVSGYQQLSPHVQNETYRFGSTSSQHTTTTVISGQGASGQNRLGLPPLM
LGGGRGRTHSEDVRDALTSLDVAIQDTRLSPGIPDTPTRLVFSALGPTSLKVSWQEPQCE
REVLGYRVHYQQLNGGESRSIDITNPRENSVVVEDLLPNHSYMFRVKAQSMEGWGPEREG
VITIESQVDPQSPLSPVPGSPFTLSTPSAPGPLVFTALAPDSLQLSWVRPRKPNGTILGY
MITCEMLHGGGEPRTIYVEGDKHETSLTVPFLNENLPYKFKVQAKTTQGFGPEREGIITI
ESQDGGNFSQFGTQQITRREVFNLPEEYTQSNITQSTLTEPFFSDGMTVTTRRIEGANTV
TQQVTKELVTRTMMSGGSLSRQVERQFYEA
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaccctcatgtgttagggggtctcctcctggtggtcctgctcttaggtcttcca
tctacccagtctcagagcaacaaatataacctctgcgtggcctccagagcgactagttgc
tcggcctgtatccgggcagacaagggctgttcctactgtgcagatgagggtttctctagt
gtacgatgtgatctggcggagaatctcaaacgatttggctgcagcgagagagggattgtt
tatatgagaagtgaagttcagacccaacagaactatgaaattaacactcttgtaagcaaa
actcaagtggccccccaaaggatgtccatgcgtcttcgtgctggggaagaaacctcattt
aacttgcaagtgtttgagccactggacacccctgtggatctgtatatcctgatggacttt
tctcactctatgtcagatgatttagccagcctaaagaacatgggtcaggagttagctaat
gttgtaagcactctctccaagaattacaccattggatttgggaaatttgttgacaaagtg
actgtaccacagaccgacatgagaccagagaaactaaagcaaccttggttagacagcact
cctcctttctccttcaagaacgtgattcaactaacaagcgatgtagagaaatttcggagt
gaactaatgaaagagaaaatctctggaaaccttgatcctccagagggggggtttgatgcc
attctacaaactgctgtgtgcacgaatcaaattggctggagaaaaggaagtactcacctg
ttagtcttctctactgagtcagcatttcattatgaagctgatgggatgaacgtacttgat
gggatactgaagcggaatgatgaacagtgccacttggatgcctctggatactacacacat
gacaccgttcaggactatccatctgtgcccacactagttcgaatcttagcaaagaacaac
atcatcccgatctttgccgtcaccgactactcctacagttactatgataagctgagcaag
tatttcaaagtatctgaaattggagaattgaaagaagattcctccaacattgtggatctc
ttgcaggaggcctttacgcaaattcgctccaggatggatatccgagatgataacacccca
cgtgcgatgaatatctcagtctcatccgaaacagctaaggttaccgaaacaggatcgttt
caagtcacccgcggggaggtgggtaccttcaaagtgaatgtcaaggctttagagcgagtg
ggcaaccagcatgtgtgtgatctaccaccgcaggaccaagggagccaaattattctcaaa
ccttccacctttacagatggccttaagattgatgcttctctgatctgtgatagctgcccc
tgtgaattgcaaaaggagttgaattcagccaagtgcagctttaatggtgactttgtgtgt
ggacgctgtgagtgcagggaacgctggatgggagaaaattgtaactgttccagcacagac
accaaaagcactcagtcatgtatagcaccagaaagtaaggagatttgctccggtaggggg
gattgcctctgtggtacctgtcagtgtcactcggagtcccccagccaacagttccaaggg
gagttctgccagttcaataacttccagtgcccacgatctctaggatacatgtgcaatgac
agagggcgctgtcatatgggatcctgtgtgtgtgatgctggctgggaaggagagagttgt
cagtgtcctaccagcaatcaaacatgtcttgataggaatgggggtctgtgcagtaatcgt
gggaagtgcgtgtgcgggcgctgccagtgtgatatcgtgtcgcagtacacagatgccacg
tgcgaattctcctattcactgcgccaactgggtgtgtgcgaagacctacggacatgtgtg
cagtgccaggcctggggaactggagagaaaaagggcaaaacgtgtgaagcatgcgaaatt
agtattaaaatggtggatgagctgaagaaagtggatgaaagaactgagaactgtactttc
cgggatgaagaagacgattgtacctatgagtacgcagtagatccaaatgcagtgcaagga
aactacactgtgctggtcaagaacaaaaaagagtgtcctcctggagccttcctctggctt
attcctctactcatctttctgatgcttctccttgggctcttgatgctcctttgctggaaa
tattgtgcctgttgcaaggcttgcttggcaatgcttccttgctgtggaccaggacggtca
gtgggatttaaagaagaccactacatgttgaggcaaagtctgatgtcatctgattacctg
aataccccattggtgcgctcagggaatctcaagggtggggacacggtgagatggaagatc
aacaacaacgtacatcgtccacccccctctcctggagctttgaaccccaaggagcttgtc
ccatatggcgtctcaatgcgtctggcccggctgttcactgagaacctgtcgaagcctcaa
tcccgcgagtgtacgcagctgcgtcaggaagtggaggattcgctaaatgaggtgtacaag
gtgatacctgggacccacaaggtgaaacagacggctttcaggcttcagtccaatgcagga
aaaaggcaggatcacacaattgcagagaccatcttgatggctcctcgggaagctgaacct
gagattgtaaaggtgacagagaaacatgtgacacaggaggctttccaggacatgaaggtt
accccaggttactatacggtgacatcagacagagatgcccatggacttgtggagttccag
gagggggttgaactggtagatgtgcgggttcctctcttcatgagggaggaggatgatgat
gagaagcagctgttggttgaagctttggacgttcccacaggaattgcccaattggggagg
aaactggtcaatattactattatcaaagagcaagccaagagtattgtgacgtttgtgaaa
cctgcctacacctacaaccggcaggaacaggttgctcgtgtcccagtttctcgggagatc
atccagaatggaaagacacaagtcacatatcgttcccaggacatgactgctcgggaggga
aaggattatacattctccgagggagagctcaccttccagtcaaatgacactcagtcagag
attctagtccctcttcttggtcggtcagaagttgacactttgctgggaaaaagacaagtt
aaacagttccttctagaacttagtaatcctaaatatggggccaagattggcaaataccca
caatgcaccatcacaattgatgacactgcagatgttatacaaaaggcaatgccagtccag
tctgtccagtcacccagtggaaagataggtgctcctatcaatttgaatggccaggctctc
agtgccaggaaaatccgactcaactggatgcccccccctggaaaacccacagggtacaag
gtacgttactggattgaaggagattcagagtcggatgccactgtcttggatacaaaagtg
ccctctgcagagctggtcaatttgtacccatactgtgactatgaaatgcgcgtatgtgca
tacaatgctcaagaggagggtccctacactgacatagtcacctgccagaccttggaggac
gtacccagtgaacctggccgcctggcctttaacgtcatttccagcacagtgacacagtta
agttgggcagagccggctgaaaccaatggtgatatcacagcatatgaggtctcctatgca
atggtcaacgaggacaacaaacccattggtcccataaagaaagtccagattgaaggtcct
aagaagcgtatggttctaattgaaaacctacgagaatcccagccataccgatacaccgtg
agggccaccaacaaagctgggtgggggccagagagagatgccaccatgaacctagctaca
cagcccacccgcccaatgtcaattcccattattcccgatgctcctattattgatgctgaa
gctggggaggaatatgacagctacttgatgtacagcaatgatgtcctgcgctctccagtg
ggcagcaagagacccagtgtatccgacgagtcagagcaactacttaatggacgcacagac
ttttccttctcggggggcagtctcaaccgtgccatggtatcagggtaccagcaactcagc
ccccacgtgcaaaatgaaacctacaggtttggtagcaccagctcccaacatacaaccaca
acagtcatatcagggcaaggagcatcagggcagaacagactggggctccccccactcatg
ttaggaggaggaaggggtcgcacccactcggaagatgtgagggatgctctgacaagctta
gatgtggctatacaggatacacgtctttccccggggatccccgacacccccacacgtttg
gtattctcagccctgggacccacctcccttaaggtcagctggcaggagccgcaatgcgaa
agagaggttctgggatacagagtgcactatcaacaactgaacggaggtgaatcaaggtcc
attgacattacaaacccaagggagaactcggtagtggtggaagacttgctccccaaccac
tcatacatgttccgggtgaaggcacaaagcatggagggatgggggcccgaaagagaaggt
gttatcactatcgaatcacaagtggatcctcagagcccactcagccctgtaccaggatct
ccattcacattaagcacccccagtgctcctggaccactggttttcacagctctggcccct
gactccctgcagttaagttgggtgagaccccgaaagcctaatggaacaatcctggggtac
atgatcacttgcgagatgttgcatggaggaggggaaccacgaactatctacgttgaaggt
gacaaacacgagacttcccttacggttcctttcctgaatgaaaatctgccatacaaattc
aaggtccaggcgaaaacaacacagggttttggaccagagagggaggggataattactatt
gaatctcaagatggaggaaacttttctcaatttggaacacaacagatcacacgtcgggag
gtgttcaatctcccagaagaatacacgcaaagcaacatcactcaatccaccctaacagaa
ccattcttttcagatggaatgactgtgaccactcgtcgtatcgagggtgccaacacagtt
acacaacaggtcaccaaagagcttgtcacacggaccatgatgtctggtggctccctgagc
aggcaagtggagcgccagttctacgaggcatga
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integrated database retrieval system
