Xenopus laevis (African clawed frog): 108701208
Help
Entry
108701208 CDS
T01010
Symbol
helz.L
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108701208 (helz.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
108701208 (helz.L)
3'-5' decay
Other 3'-5' decay factors
108701208 (helz.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
ResIII
UvrD-helicase
PAM2
PhoH
zf_CCCH_4
zf-CCCH_4
AAA_16
AAA_22
AAA_5
AAA_7
Mov-10_helical
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
108701208
NCBI-ProteinID:
XP_018091020
Xenbase:
XB-GENE-17343684
UniProt:
A0A1L8EUZ4
A0A974BYL2
LinkDB
All DBs
Position
9_10L:complement(54114991..54169272)
Genome browser
AA seq
1930 aa
AA seq
DB search
MADRRLENFCEQACESLRRQEYEAVVSLCTEALRALSHYKAAHTNEPNQTELSRIQTESL
LYRIASFLQLKNYDQADEDCRHVLGPCHTRLDSSVHAVLCSLHLEGKLQAVSSVLSKCLT
GESLNGLVNKDLTQLKTLLAEIETVSNTVRSSYHGDDLEDGSHDGWQFRPPPRGVTSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELEEWQKRYASRLIRLKQQKENTQFSGSYMESLI
EKWMNSLSPEKVLNECVEGVHVEYSPDLSVTVTTKKSHQTWTFLLTCKPARLLQRVALLY
DAHRPHFSIVAVAAGDSNSHVSQEVPESCQEWVGEKMAQNGLDHCIYKVAIAFTTGIFGT
FRQTVVFDFGAEPVLMQRIMVDAASTEDLEYLMHARQQLLTTAKRWDSMSKTIVEFEPNE
TTELDRSLLNRYQIPLSADQLFTQSVLDKTLTKCNYQSRLHDLLYIEEIAQYKEVSKFNI
KVQLQLVSSFMLTGVTGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVT
KEKSVQSQGTKEKVYEAVIEDKTKEFIFLRICKDCCEELKLKPDREMQVELQFQLNRLPL
CEMHYALDRVKDNSIMFPDLSMTPPIPWSPNRQWDELLDPRLNAKQKEAILAITTPLSVQ
LPPVLIIGPYGTGKTFTLAQAVKHILKQQETRVLICTHSNSAADLYIKDYLHPYVETGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSTHSVFQMPQKEDILQHRVVVVTLSTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALANKSTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYELYPVDFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPCHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDEGSIGVVTPYADQV
FRIRAELRKKRLSEISVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWEQFITICHDNKSLHGI
TFEQIKSQLEALELKKTYVLNPLAPEFIPRALRQQHSGNASKQQQQSPPKCKGHHNQNDH
FPGDGLVQPNPSVLIGNPIQAYTPPLGPHSNIAKSPSPVQRIDPHTGTSILYVPAVYGGN
MVMSVPLPVPWPSYQGRLSVDPRLMTHPAMAYNMNLLQAHGRGSPIPFGLGHNSPVNVGP
PQQPLQYPDKDQHEQHRNGKSENNQGADLNKIRTPEKKPPESKQGDMDPNAQRSPDSRGN
ATFLNPKFHRKDNPSQRHQNVHLAPPQPQFPMPNRHYQHLSQLQRPPFSIQQQNMLTQQQ
NHLSELQNQIPPQPGQLVPQHNHLNQQPPQASQLSPAYPPGPNHSFFNNPMPARPHSPSV
DGMMSEQPPPPMLQDVNPLRSVPQHNPLLSSHMNNFMEESPQGIGAGDTLDRLHGNLALE
TLRQQQTRIQQWNEHSAFLTQGNIPYPHNPHLQHLPQQALGITQQQLVRPNWKIPSAEEE
SEVSYSRFQEFLRELSHHDPSEGRDLSEMPPPQSRLLQYRQVQARSPPALSSPSSSHGGQ
YPNYTENSRDMEMTNNPAFAQHMTHMYPLPPGHTTPPPLKYLQHDGSWTYASLQQNPLMG
QGFHYGMSPLQHRPPQNPFMHQLQNHQQPAGQESFHPPASRAVSTSSLHTLEEYEPRGPG
RPLYQRRISASSAHTGSDDLVICQESLGQRKDLDEQTNQPPFNYSAPEMWISGAPSGPYQ
NIPCNGSSRIAPPRDMLVAPPKMAKPPDDQLKAENMQLPASFNYNVLQHLGQFPPLMPNK
QIAEPNGAAAMQQSVSGNKPTMSYASALRAPPRPKPPPEQAKKNSDPLSLFQELSLGSSS
GNNGFYSYFK
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagattggagaatttctgtgaacaagcatgtgaatcactcagaaggcaa
gagtatgaagcagtggtgtctctgtgtactgaggctctccgggccctcagccactacaaa
gccgctcacaccaatgaacccaaccagacagaactcagccggatccagactgaaagcctt
ctgtacaggattgcgtccttcctgcagctgaaaaactatgatcaagcagatgaagactgc
aggcatgttctggggccatgtcacactcggctggacagctcggttcatgcagtgctgtgc
tctttgcacctggaagggaagctgcaggctgtgtcaagtgttctgtccaaatgcctgaca
ggggagagtctgaatggcttggtaaacaaggatctgactcagctgaaaacactcttggct
gaaattgagactgtcagtaacacggtccggtccagttaccatggagatgatctggaagat
ggatcccatgatggatggcagttccgcccccctccccggggtgtcacaagtagtgaggag
tatacgttatgtaagagattcctggagcaggggatttgcaggtacggagcacagtgcact
tccgcgcactcccaggaagagttggaggaatggcagaaacgctatgcctcacgcctcatc
cgactcaagcagcagaaggaaaacacccagttttctggcagctacatggaaagtttaata
gaaaaatggatgaactcattgtcaccagagaaagtgctcaatgagtgtgtggaaggagtg
catgtggaatacagccccgacctctctgtcactgtcaccaccaaaaagtcacatcaaaca
tggaccttccttctcacttgtaagccggcacgactcctacagcgggtggcgctcctatac
gacgcacacagacctcatttcagtatcgttgcagtagctgctggagacagcaactctcat
gtatcccaggaagtcccagaaagttgtcaggaatgggtgggagagaagatggcacagaat
gggttggaccattgcatatacaaagtagcaatagcttttaccaccgggatctttggaaca
ttccgtcaaacggttgtgttcgactttggtgcggagccggttcttatgcagagaataatg
gtggatgctgcatccactgaagaccttgaatacttgatgcatgctcggcagcagctacta
acaacagctaagcgctgggactccatgtcaaagaccattgtagagtttgaacccaatgaa
actactgaattggataggagcctacttaaccgataccaaatccccctctctgctgatcag
ctgtttacacagtctgtcctggacaaaaccctgactaagtgcaactatcagtctcgctta
catgacttgctctacatcgaggagattgcacagtacaaggaggttagcaagtttaatata
aaggtgcagctgcagctggtatcgagcttcatgttgactggtgtaactggaggtgcaaaa
tatgcccagaatggacagctctttggacgctttaaactcactgagacactttctgaagat
actttggctgggaggctggtgatgaccaaagtgaacgctgtgtatttgctgcctgtcaca
aaggagaaatcggttcagagccagggcaccaaagagaaagtttatgaggctgttatagag
gataaaaccaaggagtttatcttcctgagaatatgcaaggactgctgtgaagagctcaag
ctcaaacctgatcgggagatgcaggttgagcttcagttccagctgaacaggcttccccta
tgtgaaatgcactatgccttggacagagtcaaggacaacagtatcatgtttccagatctg
agcatgactccgcccataccctggagtcccaacaggcagtgggatgagttgctggacccc
cggctaaatgcgaagcagaaggaagccatcttggccatcactacccctctttctgtacag
cttcctcctgtcctcattatcggcccatatgggactggcaaaaccttcacgctggctcag
gccgtaaagcacatactcaaacagcaagagaccagggttcttatctgcacccattccaac
agtgctgctgacctctacatcaaggattacttgcatccttacgttgaaacagggaatccc
caagccagaccactcagggtatatttccgaaatcgctgggtgaagaccgtccacccggtg
gtgcaccagtactgtctaatatccagcacgcattccgtctttcagatgccccagaaggag
gatatactgcaacaccgggttgtggtggttacactgagcacgtctcagtatctatgccag
ttggatctggaacctgggtttttcacacatatcctcttagacgaagcggcacaagccatg
gagtgtgagaccattatgcctcttgctttggcaaacaaaagtacaaggattgtcctggct
ggagaccacatgcagctcagcccatttgtctacagcgagtttgccagagagaggaacctg
cacgtctcattacttgaccgcctgtatgaactgtaccctgtagactttccctgtcgtatt
ctgctatgtgagaattatcgctcacatgaagccatcataaactacacctcagagctgttc
tacgagggaaaactgatggccagtggcaagcaaccctgccacaaagacttctaccctcta
accttcttcacagcacgtggggaggacgtacaagagaagaacagcactgctttctataat
aacgctgaggtctttgaagtggtggagcgtgtggaagagttacggaggaaatggcccgtg
gcctggggcaagttggatgagggcagcataggagtggtaacaccgtacgctgaccaagta
tttaggatacgtgcagaactacggaaaaaacgtctgtcggaaatcagtgtggaaagagtg
ttgaatgttcagggaaaacagttccgggtcctgttcctcagcacagttcgaacacgacac
acatgcaaacacaaacagactccaatcaagcggaaggagcagctcctggaagattccaca
gaagatttggattatggtttcctctccaattataaactgctcaacaccgccattacccga
gcccagtccttggtggctgtggtgggcgatcccattgctttgtgctctattggaaggtgc
aggaagttttgggagcaatttatcaccatttgccatgataacaaaagccttcatggcatt
accttcgagcagatcaaatcccagctagaggccttagagctgaagaaaacctacgtgctc
aacccactggctcctgaatttattccccgtgccctccgacagcagcactcaggaaacgcg
tccaagcagcagcagcagtcacccccaaagtgtaaggggcaccacaatcagaacgaccac
tttccaggagatggactagttcagccaaacccctctgttctgattggaaatcctatccag
gcctacacgccacccctgggcccacactccaacatagcaaagtctcctagccccgtgcag
agaatcgatccacacaccggcaccagtattctttatgtgcctgcagtctatgggggaaac
atggtcatgtctgtgcctttacctgtaccatggcctagttatcagggcaggctttctgtc
gaccctcggcttatgacacacccagctatggcgtataacatgaacctcctccaggcacat
ggccgcggctcccccataccatttggcctcggtcataattctcctgtcaatgttgggccc
cctcagcaaccccttcagtacccggacaaagatcagcatgagcagcatcgtaatggtaaa
agcgaaaacaatcaaggagcggatctgaataagattcgtactccagagaaaaagcctcca
gaatctaagcagggtgacatggacccaaatgcacagagaagtccagattccagaggaaat
gctacttttcttaatcctaaatttcatcgtaaagataatcccagtcagagacaccagaat
gttcacctggcccccccacagcctcagttccctatgccaaatcggcactaccagcacctc
tcccagctccagaggccaccattttccatacagcagcagaacatgcttacccagcaacag
aaccatctatctgaactacaaaaccaaatacctccacaaccgggccagcttgtcccacag
cataaccatttaaatcagcagccgccacaagcctcacagctttctcctgcttatcctcct
ggacccaatcattcattctttaataaccctatgcctgctcggcctcattctccaagtgtg
gatggaatgatgtctgaacagccacctcctcccatgcttcaagatgtcaacccccttcgg
tctgttccccagcacaacccactgctctcatcacatatgaacaattttatggaagagagc
cctcaaggcattggtgctggtgacaccctggatcgcttacatggcaacttggccttggaa
acattaaggcagcagcagacacgaatacagcaatggaatgaacatagtgctttcctcact
caaggcaacatcccctacccacacaaccctcacctgcaacatcttcctcagcaagcattg
gggatcacccaacagcagctagtgcgaccaaactggaagattcccagtgctgaggaggag
tcagaagtgtcttactccaggtttcaggagtttttacgagagctgtctcatcacgatccc
agcgaaggtagagacctatcagaaatgccgcccccacaatccagactgttacagtacagg
caggtccaggccagaagcccaccagcactatcatccccttcctctagccatggtggccag
tacccgaactacactgaaaacagccgagacatggagatgaccaacaacccagcatttgcc
cagcatatgacgcacatgtatcctttgccacctgggcacacaacaccgccacccctcaaa
tacctgcagcacgatggatcgtggacctatgctagccttcagcagaatcccttaatggga
caaggatttcattatggcatgtccccacttcaacacagacccccacagaaccctttcatg
caccagttacaaaaccatcagcagccagctggtcaggaatcatttcatccacctgcatct
cgagcagtatccacctcttcactccacaccctagaagagtatgaacctagaggacctggg
aggccgttgtaccaaagaagaatttctgcaagctcagcacatactggttctgatgattta
gtgatctgccaggagagccttgggcaacgtaaagatctagatgagcagactaaccaaccc
ccattcaactactccgccccagagatgtggatcagtggcgcaccttctggtccctaccag
aacattccgtgcaatggatccagcagaatagcgccacccagggatatgttagttgctcca
ccgaaaatggcgaagcctccggacgaccagctgaaggcagagaacatgcagctccccgct
tccttcaactacaatgtcctgcagcacctcggccagttcccgccgctcatgcccaacaaa
cagattgcagagccaaacggcgcagcagccatgcagcaaagtgtcagcgggaacaaaccc
accatgtcttatgccagcgccctgcgcgctccacccagacccaagccccctccagagcag
gcaaaaaaaaatagtgaccctttgtctttgtttcaggaactaagcctaggcagttcgtca
ggtaataacggcttttattcctattttaaataa
DBGET
integrated database retrieval system
