Xenopus laevis (African clawed frog): 108701209
Help
Entry
108701209 CDS
T01010
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04120
Ubiquitin mediated proteolysis
xla04137
Mitophagy - animal
xla04144
Endocytosis
xla04340
Hedgehog signaling pathway
xla04350
TGF-beta signaling pathway
xla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108701209
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108701209
04350 TGF-beta signaling pathway
108701209
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108701209
04137 Mitophagy - animal
108701209
09144 Cellular community - eukaryotes
04520 Adherens junction
108701209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108701209
04121 Ubiquitin system [BR:
xla04121
]
108701209
03029 Mitochondrial biogenesis [BR:
xla03029
]
108701209
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108701209
Membrane trafficking [BR:
xla04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108701209
Autophagy
Mitophagy
Other mitophagy associated proteins
108701209
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
HECT type E3
108701209
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108701209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
108701209
NCBI-ProteinID:
XP_018091021
UniProt:
A0A1L8EV30
A0A974H3M9
LinkDB
All DBs
Position
9_10L:54376445..54423249
Genome browser
AA seq
751 aa
AA seq
DB search
MSNQGSRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKL
GPNDNDTVRGQIVVSLQSRDRIGSGGQVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCFVDENTPITGTNGATCGQTSDPRITERRVRSQRHRN
YMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLP
PGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNRQNQQLKEQQPPQVVPLCQLP
DEVDSLTVPRYKRDLVHKLKILRQELSQQQPQAGHCRIEVCREEIFEESYRQVMKMRPKD
LWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNP
EHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWIL
ENDITGVLDHTFCVEHNAYGELIQHELKPSGKSMPVTEETKKEYVRLYVNWRFLRGIEAQ
FLALQKGFNEVIPQHLLKAFDEKELELIICGLGKIDVNDWKSNTRLKHCTSDSNIVKWFW
KAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLPKAHTCF
NRVDIPPYETYEKLYEKLLTAIEETCGFAVE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcagggatcccggcggaacgggcccgtgaagctccgactgaccgttctgtgc
gctaaaaatctggtgaaaaaggatttcttcagactcccggatccctttgccaaggtggtt
gtggatgggtcggggcagtgccactctaccgacaccgtgaagaacacattggacccaaaa
tggaaccagcattatgacctctacattggcaaatcagactccattaccatcagtgtttgg
aaccacaagaagatccacaaaaaacagggggctggtttcctaggctgtgtgcggcttctg
tcaaatgcaattaatcgactcaaggacactggctaccagagactcgacctatgcaaactt
ggtcccaatgacaatgacactgtgcgaggacaaattgtggtaagtcttcagtcaagagac
cggataggcagtggtgggcaagtggtggactgcagtcggcttttcgacaacgacctacct
gatggctgggaagaaaggagaactgcatctggccgcatccagtacctgaatcacatcaca
agaacaacacagtgggaacgcccaacacggcctgcatcggaatactccagccctggccga
ccactcagctgttttgtggatgagaatacaccaataactggcaccaatggtgctacctgc
gggcaaacctcagacccccgcattacagagagacgagttcggtcccaacggcacaggaat
tacatgagcagaacgcacttacatactcctccagacctacctgaaggatatgagcaaagg
actacacagcaagggcaggtatatttcctgcatacgcagacaggggtcagcacgtggcat
gatcctcgagttcctagggatcttagcaacatcaactgcgaagagttaggtcctctccct
ccaggctgggaaatccgcaatactgcaacagggcgggtgtattttgtggatcataacaac
cggacaacccaatttactgaccccaggctctctgcaaacttgcatctcgttttaaatcgt
cagaaccagcagttaaaggagcagcagccaccgcaggtggtgcccctgtgccagcttccg
gacgaggttgatagtctgactgtcccgcgttacaagagggacctggtacataagctcaag
atactccgacaagaactgtcccagcagcagccccaggctggccactgccgcattgaggtg
tgtcgggaagagatctttgaggaatcttaccggcaagtgatgaagatgagaccaaaggat
ctttggaaaagactaatgataaaattccgtggggaagaaggccttgattacggaggagtt
gccagggagtggctctacctgctgtcccatgaaatgttgaatccgtattacggtcttttc
cagtattcccgagatgatatttatactttacaaataaatccagattctgccgtgaacccg
gagcacttgtcctatttccattttgtgggccggatcatgggaatggctgtgtttcacggg
cactacatagatgggggcttcaccctacctttttataagcagctgcttggaaaacccatt
acgttagatgatatggagtctgtagatcctgatcttcacaacagccttgtctggatccta
gagaatgacataactggagtgttggatcacacattttgtgtggaacacaacgcctatggt
gaactaatccagcatgagttgaaacccagcggcaaaagcatgccagtcacagaggaaaca
aaaaaggaatatgtcaggctctatgtgaactggaggtttttacgggggatagaagcacag
tttcttgctctgcagaagggatttaatgaagttattccccagcatttgctgaaagcattt
gatgaaaaggaactagagctgattatctgtggtctggggaagattgatgtaaatgactgg
aagtcgaacacacgattaaaacactgcacttctgacagcaacattgtgaaatggttctgg
aaagcagtggagtcatttgatgaggagagaagggcccgtctgctgcagtttgtcactggc
tcctcgcgtgtccccctccaggggtttaaagcattacaaggtgctgcaggaccaagactt
tttaccattcaccagattgatgccagcactaacaacctacccaaagctcatacctgcttt
aaccgtgtagacatcccaccgtatgagacttacgagaagctttatgagaagttgctaacc
gccatcgaggagacctgtggatttgctgtggaatga
DBGET
integrated database retrieval system
