KEGG   Xenopus laevis (African clawed frog): 108701281
Entry
108701281         CDS       T01010                                 
Symbol
ccnt2.L
Name
(RefSeq) cyclin-T2 isoform X1
  KO
K15188  cyclin T
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108701281 (ccnt2.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xla03021]
    108701281 (ccnt2.L)
Transcription machinery [BR:xla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     108701281 (ccnt2.L)
    Brd4/P-TEFb complex
     108701281 (ccnt2.L)
    7SK RNP complex
     108701281 (ccnt2.L)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N TFIIB
Other DBs
NCBI-GeneID: 108701281
NCBI-ProteinID: XP_018091173
Xenbase: XB-GENE-17343239
UniProt: A0A1L8EVJ2 A0A974BYK5
LinkDB
Position
9_10L:61375482..61407110
AA seq 728 aa
MMADCPAPDSRWFFTREQLESSPSRKCGVEADKELSYRQQAANLIQDMGQRLNVSQLTIN
TAIVYMHRFYMHHSFTKYHRNIMSPTALFLAAKVEEQPRKLEHVIKVAHACLNPVEPQLD
TKSEAYLQQAQELVTLETVLLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATN
SLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPSVTLELLDELTHE
FLQILEKTPSRLKRIRNWRANQAARKPKSDGQLDNSLLSSSLVQNSILVDPVSGMAATAS
FPKASTTFPAPVALNSGNLPLQAGHIPEEMALLTSTMPSTSYNMGSHHEWPQHQEQHRTD
QIYSQKPEGALQVPHYFQQGAAVQIHTGLHHRSDKGSEHSTVKSEHAHKSNSGKHHGQVY
ASSLAISHKMSLDKYREKRKLETVELDSRDQYPLAGHEQHKKHSQAAASGSVTSPIKMKI
PLANEKTEKHSSDKKDKTGSLKLRIPIPPTERGASKEDLKMKIKVSSADRHSSSDEGSGK
SKHSSPHVSKEHKERHKEHSSNRHHSSSHKHSHSHNFGSGSNNSSNKLSMDGLQPTVLRS
PVVLPTDGSSSSSSSSRKRPHSNDASYNHHSKMSKSSKTSGSSTSSSSVKQYISSHNSVL
NHPLPPPPPVTYQVGYGHLSTLVKLDKKPVESNGPDASHEYGANNQHMDYKDTFDMLDSL
LSAQGMNM
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgatggcggactgcccagcgccggactctcgctggttcttcacccgggaacagttggag
agcagcccgtctaggaagtgcggggtagaggcggacaaggaattatcgtaccgtcagcaa
gccgccaacttgatccaggacatgggacagcggctgaatgtatctcagctgaccataaat
accgccatcgtttacatgcacagattctatatgcatcattcttttaccaaataccacaga
aatataatgtctcctactgcgttgttcctggctgccaaagtagaagaacagccacgaaaa
cttgaacatgttattaaagtggcccatgcctgtcttaatcctgtagagccacagttggac
acaaaaagtgaagcttacttacaacaagcgcaagaactggtaacacttgaaactgtattg
ttgcagaccttaggttttgagatcactatcgagcaccctcatacagatgtcgtaaaatgt
acccaattagtaagagcaagcaaggatttggcccagacttcctatttcatggctaccaac
agtctgcacctcactacattctgccttcaatacaagccaacagtaatagcatgtgtatgc
attcacctagcgtgcaagtggtccaactgggagatcccagtttcaacagatgggaaacac
tggtgggaatatgtggacccatctgttacgttagagcttctagatgagttaacgcatgaa
tttttgcaaatattggagaaaactcctagtagattaaaaaggattcgaaactggagggca
aaccaggctgccaggaaaccaaaatctgatggtcagcttgataattccctccttagttca
tccctggtgcagaattccattttagtggatccggtatctggcatggctgcaactgcaagc
tttcccaaggcatccactacgtttccagctccagtagctttgaactcagggaacctgcct
ctccaggcaggtcacattcccgaggaaatggcactactgacttctacaatgccaagtaca
tcctataatatggggtctcatcatgaatggcctcaacatcaagagcagcataggactgac
caaatttatagccagaaaccagaaggtgcccttcaagttccacattactttcagcaagga
gctgctgttcagattcacactgggctacatcataggtctgataaaggttctgaacattct
actgttaaatcagaacatgctcataaatccaacagtggcaagcaccatggacaggtctat
gcttcatcactggctatatcacacaaaatgtcattggacaagtatagagagaaacggaag
cttgaaactgtagaacttgattcaagggaccaatatcctctagcaggccacgagcagcac
aaaaagcacagccaagcagctgcgagtggttctgtaacgtctcctattaaaatgaaaatt
cctcttgcaaatgaaaagactgaaaaacactcatctgataaaaaggataaaactggttct
ctgaaattgcggatacctatcccaccgactgagagaggcgcaagcaaagaggacttgaaa
atgaaaataaaagtatcttcagctgacagacacagctcatccgatgagggcagcgggaag
agcaaacactcaagtccgcacgtgagcaaggaacataaagagaggcacaaagagcattct
tccaacagacaccacagtagcagccacaagcattcccattcacataactttggcagtggg
agtaacaatagtagcaataagcttagcatggatggattgcaaccaaccgtgttgaggagt
cctgttgtcctgcctactgatggcagcagctctagctccagctcttcaagaaagaggccg
cattccaatgatgcctcatacaaccatcactccaaaatgagcaaaagttccaaaacttca
ggtagttctactagttcttcctctgttaagcagtatatatcctctcacaactctgttctt
aaccatcccttaccccctcctccccctgtcacataccaggtgggctacgggcatctcagc
accctcgtgaaactggacaagaagccagtggagagcaacggccctgatgccagtcacgag
tacggtgcaaacaaccagcatatggactacaaagatacattcgatatgctggattccctg
ctaagtgcccaaggaatgaacatgtga

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