Xenopus laevis (African clawed frog): 108701459
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Entry
108701459 CDS
T01010
Name
(RefSeq) alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108701459
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108701459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
RCC1_2
MORN
VPS9
PH_alsin
Alsin_RLD
DH_ALS2
RhoGEF
HA_Alsin
PH
Motif
Other DBs
NCBI-GeneID:
108701459
NCBI-ProteinID:
XP_018091663
UniProt:
A0A1L8EX39
A0A974BZV1
LinkDB
All DBs
Position
9_10L:90095372..90148908
Genome browser
AA seq
1637 aa
AA seq
DB search
MEEQKESPDDTKGGQERGTVHVWQAGTNPVNPERLQGLGGKIVLQASLGKNHGLLLTRDG
QVFSFGKQPWRQEETTPETLVLEKALCGEQVICVSAGSYHNGTVTESGMVYMWGENTAGQ
CAIANCPSIPKPTAITIADQETTPPRWVRAIQLSCGEEHTLALSVSREIWAWGSGCQLGL
ITTTFPVIKPQKLEHLSGRVVLQVVCGAFHSLALVQCPIAQDLKPVPERCNHCSQLLITM
TDKEDHVVISDAHCCPLGVMLAESHPGSKSSPTSFGLSVKSITKEHVMTHEEKETSQKYP
ECDTELGTDAASFCETETSQIFGKSNDMSSSPSSQTEQCLKDGMAEITQLQEQKPLEELS
EIAGSSTAISASGLNSLVVSCASAVSVRVAATCEAGALSLKKVMNFYSGSLCDPGAQQAI
SSSAHDGLKDSREEQVKLESMQGKKSSSLVDIREEEADAGNRRLSLPGLLSQVSPRLLRK
VGRARMRTVALTPTNSGEADVLLPSLKTEVWSWGRGKEGQLGHGDVLPRLQPLCVRSMDG
KEVIQLAAGSHHSVALTARSQVYSWGSNSCGQLGHLQSPTTIPRLVKVCESDGVWSVAAG
RDHSLFLVHKKEEFQPAVLYCGLQTANDWSGPDPSQYPIEIVECGKLGYICSISAGADRC
LALVDQNMMGYIGSLHELADTEMRFYSHLSDMKSVILRPLLGLDNLGSATALQQLQNMAT
KFSKLCYLIGQHATSLVHFLRGAKDARSLSILEHSSLFLDSYTEYCTLLSNFLVMGGFTV
LSKTAMEFFSKNQEHWQSFFTGNEEGISMAEKLNSLFFSPMSRLQEYARLLLKLAMCFEV
SSPEYKKLQDSSSSYDSLALLLSRKKKDAEYTLGFWKTFPGKMTDSLRKPDRRLICDSSN
RGLSLQNAGRFSVNWFILFNDALVHAQFSTHHIFPLSTVWVETLSEEMTGVNGLKITTPE
EQLTLISSSPQEKAKWLWSISQAVDQALKGVTEPLAQSGGSVHRQEPPMSRTAKYTFYKD
PRLKDATYEGRWLSGKPHGRGTLSWPDGRMYSGTFRNGLEDGYGEFTIPNKALNKNDRYV
GHWKDGKMCGHGTYWYANEDVYEGYFQDNMRHGHGLLRSGKLTSNSPSIFIGQWVMDKKS
GYGVFDDITRGQKFMGMWQDDVRQGNGLVVTQFGLYYEGAFNLNRMMGCGVLLSEDDTVY
EGEFSDDWTLNGKGVLIMSNGDCIEGIFGGEWGSGIKVSGMFSKPNLFDGETEKAKSLKL
GHLVVTADEKWKSIFNECWSHLGCEIPGEGDTQKAWDNIAVALTTGRWQQRDSPENQRRS
QSQALESLELIPQNLSPFNMDKYDKIKMYLINACETPVHPLGKLVETLVAVYRMTYVGVG
SNRRLLEEAVREIKSYLKRIFQLVRFLFPDLPEEGSMIQLLPAPKDSPDKIHICNGGTES
VPDSPEPGYVVTCSGLLLPVLLPRLYPPLFMLYALEHEKDENAYWDCVLRLNKQPDVALL
AFLGVQNKFWPTTINFLGETTKVLTSTKDSCFASAVECLQQISTRFTPSDKLKVIQQTFE
EITQEVQGMLKEDFLWSMDELFPLFLYVVLRARIRNLGSEVHLIEDLMDPYLQHGEQGIM
FTTLKACYYQIQHEKLH
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacagaaagaaagtcctgatgataccaaaggaggccaagaaagaggaactgtc
catgtgtggcaagctggtacaaacccagttaacccagagcggcttcaaggtttgggaggg
aaaatagtgctacaagcaagccttgggaaaaatcatggactattgctaactagagatggt
caagtgtttagctttggaaaacaaccatggaggcaggaagagacaaccccggaaactctt
gttttagagaaagctctatgtggagagcaagtaatatgtgtgagtgcaggaagctaccac
aatggaactgtaacagaaagtggaatggtttacatgtggggggaaaacactgcaggacag
tgtgcaattgcaaactgcccatccataccaaagcctacagccattaccatagctgaccag
gagactacccctccaagatgggtaagggctatacagctgtcatgtggagaagaacatacc
ctggcactgtctgtcagcagagaaatatgggcgtggggctctggctgtcagcttggattg
ataaccaccacttttccagtaattaagccacaaaagttggagcatctgtcaggacgggtt
gttcttcaggttgtctgtggggcatttcacagcctggcccttgttcagtgtcccattgct
caggacttaaaacctgttccagagagatgcaaccactgcagccaactgctcattacaatg
acagacaaggaagaccatgtcgtcatttctgatgctcattgctgcccactgggggttatg
ctggcagaatcccatcctggcagcaaaagcagtcccacttcttttggacttagtgttaaa
agcattacgaaggaacatgtaatgacccatgaagaaaaggagacttcccaaaaatacccc
gaatgtgatacagagctgggtacagatgctgctagcttttgtgaaacagaaacttctcag
atttttggcaaatccaatgacatgagctcatcaccctcctctcaaaccgagcaatgtcta
aaggatggaatggcagaaattacacagctgcaagagcagaagccattagaagaactgagt
gagattgctgggagctccactgctatctcggcatcaggtcttaacagtctggtggtatct
tgtgcctctgctgtaagtgtgagggttgccgctacctgtgaagccggggctctttcactc
aagaaagtcatgaatttttactctggatctctgtgtgacccaggagctcagcaagctatc
agttcctctgcacatgatggactgaaggacagccgtgaagaacaggttaaactggaatca
atgcaaggcaagaagagttccagccttgtagacatcagagaagaagaagcagatgctgga
aacagaagactttctctgccaggcctgctgtctcaagtgtctcctagactgctacggaag
gtaggacgagccagaatgaggaccgtggctctgacacccacaaacagtggtgaagctgat
gtgcttctgccctctttgaaaacggaggtgtggagctggggaagagggaaggaaggacag
cttggacatggagatgtcttgcctagattgcagcctctctgcgtgagaagtatggatggc
aaagaagtgattcagttggcagccggcagtcaccactcagtggctcttactgccagatct
caggtttattcttggggcagtaattcctgtggccagcttggtcatctgcagtctccaacc
accataccacgtcttgttaaggtgtgtgaaagtgatggcgtgtggtctgtagctgcagga
cgggatcactccctttttttggtacacaaaaaagaagagtttcagcctgctgtgttatac
tgtggacttcaaacagcaaatgactggagtggacctgatccaagtcaatacccaatagag
atcgttgagtgtggcaagcttggctacatttgtagtatctctgctggagctgatcgatgc
ttagccctggtagaccaaaatatgatgggttatattggaagtctccatgagctagcagac
acagaaatgcgcttctacagccaccttagtgatatgaagtctgtgatactcagacctctt
ctggggcttgataacctaggttcagccactgctcttcagcaactacagaatatggcgact
aaatttagcaaactctgctacttgattggccagcatgctacctcactcgttcactttctg
cgtggagcaaaggatgcccggagcctgtctattctggagcattccagtctcttcctagac
agctatacagagtattgtactttgctctccaatttccttgtgatgggaggattcactgtt
ctttctaagacggcaatggaattcttcagcaagaaccaggagcattggcaaagttttttt
actggaaatgaggaaggcatttctatggcagagaagctgaattctctctttttctcaccg
atgagtagattacaagaatatgcccggctgctactgaaactcgcaatgtgctttgaagtg
tcctctccagaatacaaaaaactgcaagattcaagttcaagctatgactctctggccttg
ctactgagcaggaagaagaaggatgcagaatacacattaggtttttggaagaccttccca
ggaaagatgacggactccctgaggaagccagataggcggctaatttgtgacagtagcaac
cgcggcctctccctgcagaatgcaggacgtttttctgtcaactggttcatcctgttcaat
gatgctttggtgcatgcccagttttctacacaccacattttccccttatccacagtctgg
gtggagactttgtcagaagaaatgaccggagtcaatggtttgaagatcactaccccagaa
gagcaattaactctgatttcttcatctccacaggaaaaggctaaatggctttggtcaatt
agtcaggcagtggatcaggccttgaagggtgtgacggagccacttgcccagtcaggtgga
agcgttcatcggcaggaacccccaatgtcacgcactgccaagtatactttctacaaggat
cctcggctaaaagatgcaacctatgaagggcgctggctttctggaaaaccacatggcagg
gggactctgagttggccggatggaaggatgtattctgggacttttcgcaatggcctggag
gatggatacggagaattcacaattccaaataaagccttaaacaagaatgatcgctatgtg
gggcactggaaagatggcaaaatgtgtggccatggcacctactggtatgcaaatgaggat
gtatacgaagggtattttcaagataatatgcgacatggacatggccttcttaggagtgga
aaactgacatccaattcacccagcatattcattggccagtgggtaatggacaaaaagtct
ggctatggagtgtttgatgatatcaccagggggcagaaattcatgggaatgtggcaagat
gatgtccggcagggtaacgggctagtagtcacacagtttggcctttactatgaaggtgcc
tttaaccttaacaggatgatgggatgtggggttctactgtctgaagatgacacagtttat
gagggagagttctctgatgactggactttgaatgggaagggagttcttattatgtcaaat
ggagattgcattgaagggatttttggcggagagtggggatctggcatcaaagtcagcggc
atgttctctaagccaaacttatttgatggggaaactgagaaggcaaaaagcttgaaatta
ggccaccttgttgtgacagctgatgagaaatggaaatcaatattcaatgagtgctggtcc
catcttggctgtgagattcctggggaaggtgacacacagaaagcttgggacaacattgct
gtagcactaactactggtagatggcaacagagagacagcccagagaaccaaagacgctca
caaagccaggccctggagagtttggagcttattcctcagaacctcagcccatttaacatg
gacaaatatgacaagataaagatgtatcttatcaatgcttgtgagacgccagtgcatcca
cttggaaagcttgtggagaccctagtagcggtgtacagaatgacttatgttggtgttgga
tccaatcggaggcttttagaagaagcagtaagagagatcaagtcctacttgaaacgtatc
ttccagcttgtgaggtttctttttcctgacctacctgaagagggcagcatgatccagctg
ttaccggccccaaaagattccccagacaagatccatatttgtaatggggggacagaatct
gttccagattccccagaaccaggatatgtagtgacttgctctggactgctgctccctgta
ctgctgccaaggctctaccctcctctgttcatgctgtatgctttggagcatgagaaagat
gaaaacgcctactgggactgtgtcctgcgtctcaacaaacagccagacgttgcattgctt
gcatttttgggagtacagaacaaattctggccaaccaccattaatttccttggtgagact
acaaaggtcttaacaagcacaaaagactcctgttttgcctctgcagtagaatgcctgcaa
cagataagcacaagattcacaccatcagacaaactaaaggttatccagcaaacatttgag
gagatcacacaggaggtacaaggaatgctcaaggaagatttcctttggtctatggatgaa
cttttcccactgtttctttatgttgttcttcgtgccaggatcagaaatctaggttctgaa
gtgcacctaatagaggacttaatggatccatatcttcagcatggagaacagggaattatg
tttacaacgctaaaggcatgctactaccagatccaacatgaaaagctccactag
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integrated database retrieval system