KEGG   Xenopus laevis (African clawed frog): 108701505
Entry
108701505         CDS       T01010                                 
Symbol
arpc1a.L
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-B
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04144  Endocytosis
xla04517  IgSF CAM signaling
xla04530  Tight junction
xla04810  Regulation of actin cytoskeleton
xla05100  Bacterial invasion of epithelial cells
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    108701505 (arpc1a.L)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108701505 (arpc1a.L)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108701505 (arpc1a.L)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108701505 (arpc1a.L)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108701505 (arpc1a.L)
   05100 Bacterial invasion of epithelial cells
    108701505 (arpc1a.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    108701505 (arpc1a.L)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    108701505 (arpc1a.L)
Membrane trafficking [BR:xla04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    108701505 (arpc1a.L)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     108701505 (arpc1a.L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N WDR55 Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Rax2 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st RMC1_N Beta-prop_SPT8
Other DBs
NCBI-GeneID: 108701505
NCBI-ProteinID: XP_018091747
Xenbase: XB-GENE-17343515
UniProt: A0A1L8EXB5 A0ABE4LHS1
LinkDB
Position
9_10L:complement(95710350..95728998)
AA seq 370 aa
MSLHQFLLEPITCHAWNKDLTQIAISPNNHEVHIYKNSGNQWVKCHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKTRVFSAYIKEVDEKP
ASTPWGSKMPFGQMMAEFGGVSSGGWVHSVSFSASGNKLAWVSHDSTVSVADASKNMSVS
QLKTEFLPLLSVIFVSENSLIAAGHDCCPMLFTYDEQGSLTFVSKLDIPKQSTQRNISAM
ERFRNMDKRATTEDRNTTLETLHQNSITQVSIYDGDKTDCRKFCTTGIDGAMTIWDFKTL
ESYIQGLRIM
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtccttgcaccagtttttacttgaacccattacttgccatgcctggaataaggatctc
acacagattgcaattagtccaaataaccatgaagttcatatttacaagaacagtggaaac
cagtgggtaaaatgtcatgaattaaaggaacacaatgggcacatcacaggcattgactgg
gctcctaaaagtgaccgtatagtaacgtgtggtgctgaccgtaatgcatatgtttggagt
caaaaagatggtgtttggaagccaacattggtgattctccgcattaaccgtgcagctacc
tttgtaaaatggtctcccctcgaaaataagtttgcagtgggaagtggtgcaagacttata
tctgtgtgctactttgaatctgaaaatgactggtgggtaagcaaacacatcaagaagcca
attcgttcaactgtgctgagcctggactggcatcccaacaatgttttgctggcagctgga
tcctgtgacttcaagacaagggtcttctctgcatatattaaggaagttgacgaaaaacct
gcaagcactccatggggatcaaaaatgccttttggtcagatgatggcagagtttggagga
gttagtagcggaggctgggtgcacagtgtcagtttctcagctagtggcaacaaacttgca
tgggtcagtcatgacagcactgtgtcagtagctgatgcttctaaaaacatgagtgtttcc
caactgaagacagagtttcttcctttattaagtgtcatctttgtatcggaaaacagcttg
atagcagcgggccatgattgctgtccaatgctgttcacctacgatgagcaaggttccttg
acatttgtttccaaactggacattcccaagcagagcactcaacgcaatatctctgccatg
gagcgctttcgcaacatggacaagagggctaccacagaagaccgtaataccaccctggag
actcttcatcagaacagcatcacccaagtgtctatctatgatggtgacaagactgattgt
cgcaagttctgtactacaggaattgatggagcaatgactatctgggattttaagaccctg
gagtcatacattcaaggtctcaggattatgtga

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