Xenopus laevis (African clawed frog): 108701548
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Entry
108701548 CDS
T01010
Symbol
tmc5.L
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
108701548 (tmc5.L)
03037 Cilium and associated proteins [BR:
xla03037
]
108701548 (tmc5.L)
Transporters [BR:
xla02000
]
Other transporters
Pores ion channels [TC:
1
]
108701548 (tmc5.L)
Cilium and associated proteins [BR:
xla03037
]
Other cilia and associated proteins
Stereociliary proteins
108701548 (tmc5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
108701548
NCBI-ProteinID:
XP_018091834
Xenbase:
XB-GENE-6487151
UniProt:
A0A1L8EXU6
A0A974C038
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All DBs
Position
9_10L:complement(103655350..103708461)
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AA seq
899 aa
AA seq
DB search
MSRKNSDGFINEAYHDSETLQLDRGRYNTSFSREKSSFYNPNPYNDDNIGYGEQPPERRQ
NRVFLPMNSVRQDPEYSQQIPRNFVPNNNPYGGDYSNPAFEPDSNTVAPYDYNGTRHPYF
GSGVDLAEDPSFPRGSSRKSTAALQPRISEVDPSLEKQENKELVRKLADLPTADIAKELK
KLPTSVKEKRDLRNKVFLLKQKSYKGAYQMDCCNGCLHQIRVWFRKSKQSIADVLVLLQL
WHSTLKVIGSKFGTSILSYFIFLKWLLRFNIFSFIVNFSFITIPQFFDMNPNNLSFSGLE
LLTGAGYFQDTVLYYGFYTNSTIRNNESLAPYNMQLAYIFTIGLYLAACFLILLFSMARS
FRKNFINPASFSGNACKLLCSWDFSITHEKAVNLKRKNLSTQIKESLSEKLQEKLKLTVN
QRIVRFLIHLAAWLVSSGIAAGCCAGVYYLCLNLQSIQNASANELTRQAATLLVPVVVAL
INMIIPLVYAMFFLVEKYKYPRHEIYVEIIRNVLLKISIIGILCYYWLHSVAESQSECWE
SFVGEDVYRLVVVDFIFALIGSFFGEFIRRIIGMHCCKKLGMPEFDIARNVLDLIYAQTL
AWIGMFFSPLLPIIQIIKLFIIFYVKKVSLMMNCTPPRRAWRAAQMTTIFIFILFFPSFA
GVLCMIGATVWRRQPSQNCGPFRGLETPYQSISNWVSSLTIFENSLWVVWIYENIVESVL
FFYILTLIVLIISYLYWQIIQGRKIMVQHLYQQIANEGKDKSFLLHELRKAQSLNEAPGR
APYRAAQRQVQPSYRNQEMHTVNEHIPLESRGESIGTSDVLGLVMRARQQAEMEERSSAL
NSNLSSNNGNPLDSPGQAWSSRKQQDPNREPVWNNNSRQEAIAMVMRERQLAERGPPTG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaaaaatagtgatggttttattaacgaagcctatcatgattcagaaaccctg
caactggacagagggcggtataatacatcgttctcgagagagaagtcgtcgttctacaac
cctaatccttacaatgatgataacattggctacggtgaacaaccacctgaaaggaggcag
aacagagtttttttgccaatgaactcagtgaggcaagatccagaatacagccagcaaatt
ccaagaaactttgttccaaacaataatccctatggtggagactatagcaatcctgcattt
gaaccagattccaatacagtggcaccttatgattataatggcactagacacccatacttt
ggcagtggggttgacctagcagaagatccaagtttcccaagaggatccagtagaaaaagc
acagctgcgcttcagccaaggatttcagaggtggatccctcccttgaaaaacaagaaaat
aaagagcttgtaaggaagcttgcagacttgccaactgccgacatagccaaagaactcaaa
aagcttccaacttctgtgaaagaaaaacgtgacctgaggaacaaagtcttcttgctgaaa
cagaagtcatataaaggtgcctaccagatggactgttgtaatggatgtcttcaccaaata
agagtgtggttccggaaatccaagcagtcaatagcagatgttttggtattactgcaactt
tggcacagcactctcaaagtcatagggagcaagtttggaacaagtatcctctcctatttt
atattcctgaagtggctcctccggtttaacatcttctcattcattgtgaacttcagtttt
ataaccattccacagttctttgatatgaatcccaacaacttatcattttctggcctggaa
ctactaacaggagctggctattttcaagacactgtcttatactatggtttttacacaaat
tctacaatcagaaacaatgagagccttgctccttacaacatgcaacttgcttatatcttc
actatcggactgtaccttgcagcctgcttccttatcttgctattcagcatggcaagatcg
ttccggaagaatttcattaatccagcttccttctcaggcaatgcttgcaagcttctctgc
agttgggatttcagcataacccatgaaaaggctgtgaatctgaagagaaagaatctgagt
acacaaataaaggaaagcctatcagaaaaattacaggagaaactaaagttaactgtgaat
cagaggatcgtacgttttctaatccatttggcagcatggttggtctccagtggcattgcg
gctgggtgctgtgccggcgtatactatctctgcttgaaccttcaatccattcagaatgca
agtgctaatgaactgacaaggcaagcagcaacattactggttccagtggtagttgccctg
atcaatatgatcattcctcttgtctacgccatgttcttccttgtagagaaatacaagtac
ccacggcatgagatctatgtagagattataaggaatgttctcctgaagatttcaatcatc
ggcattctgtgttattattggttacattctgttgccgaatcccagtctgagtgctgggaa
tcatttgtgggagaagatgtctatcggcttgtagtggttgatttcatattcgccctgatt
ggttccttctttggagaatttataagaagaatcattgggatgcactgctgcaaaaaatta
gggatgcctgaatttgatatagcacggaatgtcttagatttgatatatgcccagacactg
gcatggattggaatgttcttctcccccctcctgccaataatccagattattaaactcttc
atcattttttatgttaaaaaggtgagtctgatgatgaactgtaccccacctcgcagagcc
tggagagcggctcaaatgacaacaatcttcatatttatcctgtttttcccatcatttgct
ggagtcctttgtatgattggtgccactgtttggagacgacagccatcacaaaactgtggt
ccttttcgaggcctagaaactccttatcaatcgatatccaactgggtgtcctccttgact
atttttgaaaactcactgtgggtcgtgtggatttatgaaaatatagtcgagagcgttctt
ttcttctacattctgacactgattgttctaataatttcctatctgtactggcaaataatt
caaggtcggaagattatggtgcagcatttgtaccagcaaattgccaatgaaggaaaagat
aaatcatttttacttcatgaacttcggaaagcacagagtctaaatgaagctccaggcagg
gccccatatagagcagcgcagagacaggtgcagccttcgtacagaaatcaggaaatgcac
actgttaatgaacacattccacttgagtccaggggtgaaagtattgggacttcagatgtc
ctggggcttgtgatgagggcgaggcaacaggctgagatggaggaaagatcatcggcattg
aatagtaacctctcaagcaataatggtaaccctctagattcaccaggacaagcttggtct
tcaagaaaacagcaggacccaaacagggagccagtttggaacaataatagccggcaagag
gcaatagccatggttatgagagaaaggcaattggctgaaagaggaccacccactggataa
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