Xenopus laevis (African clawed frog): 108701592
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Entry
108701592 CDS
T01010
Symbol
usp42.L
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
108701592 (usp42.L)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108701592 (usp42.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108701592 (usp42.L)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108701592 (usp42.L)
Ubiquitin system [BR:
xla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108701592 (usp42.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108701592
NCBI-ProteinID:
XP_018091922
Xenbase:
XB-GENE-6488388
UniProt:
A0A1L8EXZ0
A0A974C0H5
LinkDB
All DBs
Position
9_10L:111119464..111153368
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AA seq
1172 aa
AA seq
DB search
MTIIDKVSSAPDACQNQLCSTVAPSSGEMENGSSVWGVVSALAKIGLGLVPAAAVYSNSS
VPEKPVPSEQNDPPLAVPGDGTDPPEKPGDGIDPPEKILFPPAKICLKWQRAQKVGAGLQ
NLGNTCFVNSVLQCLTYTAPLSNYLISREHSETCHSQDFCMMCVMQTHISMALSNSGGVI
KPSAVVNDLRRISKNFRYGSQEDAHEFLRYTVDEMQKSCLRGSCRLNRHTQATTLIHQVF
GGYLRSRVTCLNCKAVSDTYDQYLDLTLEIKTAHSVNQALEQFVRPEQLDGDNAYKCSKC
KQMVTASKRFTIHRTSNVLTLSLKRFASFNGGKLSKEIKYPEFLDLRPYTSDPNGEPVIY
VLYAVLIHTGFSCHGGHYYCYVKACNEQWYLMNDSTVSTTDIRTVLNQQAYLLFYVRAQN
SQNGASYSLHAASPSSPQPSSSQRAGNSKSALVGPPRKIKNSKHMNGKKSPKNQMNNSVV
NNNNMNLKRPPLGNTVVNRQTVINIPNNKKQKITISINKYHQQGLSLPTVHKTESLHKPA
PSSTITKHSNKPTSNTSTPLVRKHSPSKPYPGPLVNGTCKAGSSLLVPYGADSSENSEEE
YKGLDSSDWNGKSINGEMCKNGLSLHEDKSPCNSFKTSSEKEEPLKAAVESLSRNSMAGS
DTNDSVNVPEISHSSNVGDPTEASSLKKTELTQDVDTILPLNKEKKPLILCNNTSEGKST
EKTAPYLSNGTSSLHNTALWRNGMDPPAKQQAEEGQSASVNPAACGKQENRMADTRINKN
AHTSSEDNGINNTLVNSLSADDRDEETFNVPSINKYDGGLPALLTGSDTNQSMVKVVAQP
DHSDENVNRISAQPHENSDTEKKVPTENGAEKSYSVFADTKKVKRDHFRNERCRSDSSEE
RRPTSNRERQSRSRERTKWKHYRPSHCDEYRHRDHYRRSSPYNYKDCNKHSQNRGRSRSR
GRYETSKSWYSNSKRDRSRSRERNYQDKSRRYDSYRHYNDHYTSHGYRDYRDRKPSYEDR
DYPSKSYNSYRSSCSYYPRDKVREYPNSPKHNIYYSSSFQRHSEKYHHEKYNGVLDYHQA
DKHSKERKSKQRYSRDSDHESETKRRQNGDLRDMRKRRWSSSSESSDYEIDVKRKRIGTN
GAATKDRFRVHGNADFASFEERPLKMTVFQNS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgactataatagataaagtgtcatcggcgcctgatgcttgccagaaccaactgtgcagc
acagtggcaccatcatcgggagaaatggaaaatggttcttcggtttggggtgttgtatcg
gccctagctaaaattggccttggactggtacctgctgcagccgtctactccaactcatct
gttcctgaaaagcctgtgccatcagagcagaatgatccacctttagcggtcccaggagat
ggaactgatccacccgagaaacctggggatggcattgatccacccgagaagattcttttc
cccccagcaaagatttgtttgaagtggcagcgtgcacagaaagttggagctggtctccaa
aatctcggcaatacatgctttgtgaattctgtattgcagtgtttaacttacacggcgcct
ctttctaactaccttattagccgcgaacactctgaaacatgtcacagccaagacttttgc
atgatgtgcgtaatgcagactcacatatcaatggctctgtcaaactccggaggtgtcatc
aagccgtcggcagttgtcaatgatcttagaagaatctctaaaaacttccgatatgggagc
caggaagacgcacatgaatttctccgttacacagttgatgaaatgcagaaatcctgcctg
agaggttcttgcaggttaaatcgacacacgcaagccactacccttattcaccaagtgttc
ggtggatacctgcggtctcgagtcacatgtctgaactgtaaagcggtgtctgacacctac
gatcaatatcttgatctcacactagagataaagacggcacatagtgttaaccaagcccta
gagcaatttgtaaggccggaacagctggatggagacaatgcctacaaatgtagcaaatgc
aagcaaatggttaccgcaagcaagagatttacaattcaccgaacatccaatgtgctgact
ctgtccctgaaaaggtttgcaagttttaacggtggcaaattatccaaggagataaaatat
ccagaatttcttgatcttcgtccatacacttctgatcccaatggagagccagttatttat
gtcctgtacgctgtcctcatacatactggttttagctgccatggtggccactattactgc
tatgtgaaggcatgcaatgaacagtggtaccttatgaatgattccactgtttccaccaca
gacatccgaacggttcttaaccagcaggcttatcttctgttctacgtcagagctcagaac
tcccagaatggagcgtcttactccctgcatgcagccagtcctagctccccgcaaccgagc
agcagccagagagccggcaactccaaatccgcattggttggacctcctcgcaaaataaag
aattcaaaacacatgaatgggaagaaatcgcccaaaaaccagatgaacaattctgtagtg
aataataacaacatgaatcttaaaaggccacctcttggcaacactgtcgtcaatcggcag
actgtaatcaatattcccaacaacaagaaacaaaagattacaatcagcatcaataaatac
catcagcaaggactctccctgcccactgtacataagactgagagcttacacaagcccgcc
ccttcatccaccattactaagcactctaataagcctacctcaaatacctctacaccgcta
gtaaggaaacactcgccaagcaagccgtatccaggaccactagtcaatggcacgtgcaag
gctggctccagtttgctggtaccttatggcgctgattcttcagaaaactctgaagaggag
tataagggattggacagcagcgactggaatggaaaatctataaatggggagatgtgtaaa
aatggactgagcttgcatgaggacaagtctccttgtaactcgttcaaaactagttctgaa
aaggaagagccacttaaagctgctgttgaatcgctgtctaggaatagtatggccggctct
gacaccaacgatagtgtaaatgtacctgaaatcagtcattctagtaatgtgggagatcct
acagaagccagttctctgaaaaaaacagaattaacccaagatgttgacactattttaccg
ctaaacaaggagaagaaacccttaattttatgcaacaacacatctgagggtaaatccaca
gaaaaaactgcaccatatttatcgaatggaacaagtagtttgcacaacactgctctgtgg
agaaatgggatggacccgcctgctaaacaacaagcggaggaaggccaaagtgctagtgtg
aatccggcagcttgtgggaagcaggagaaccgcatggcagacactcgcattaataaaaat
gcacacacttcatcagaagacaacggcattaataacacacttgttaactctttatcagca
gacgaccgtgacgaggaaacatttaatgtgccgtcgatcaataaatatgacggtggtcta
cctgctttactcaccggttctgatacaaaccaatctatggtcaaggttgttgcccaaccc
gatcattcagatgagaatgtgaatagaatttcagcccagcctcatgaaaactctgacacc
gaaaagaaagtcccgacggaaaatggggcagaaaagagctactctgtgtttgccgacacc
aagaaagtgaaaagggatcacttccgcaatgagcgatgccgttctgacagcagtgaagag
agacgtcccaccagtaaccgagagagacagtcccgcagcagagagagaactaaatggaag
cactatagaccgtctcattgtgatgaatacaggcacagggatcattatagaaggagcagc
ccgtacaactacaaggactgtaacaaacacagccagaacaggggcagatccagaagtcgg
ggccgctatgaaacctctaaaagctggtatagcaattccaaaagggatcgttcacgcagt
cgagaaaggaactaccaagataaaagcagacgttacgatagctacaggcattataatgac
cattatacatcgcatggttaccgggactatcgagatagaaagccttcgtatgaggacaga
gactatccaagtaaatcctataactcgtacagaagcagctgctcttactaccccagagat
aaagtacgggaatatcccaatagccccaaacacaatatctattattcgtcctcttttcaa
aggcactcggaaaagtatcatcatgaaaaatacaacggtgtcctggattaccaccaagcc
gataaacatagtaaggaaagaaaaagcaaacaaagatactctagagacagcgaccacgag
agcgaaaccaagcgcagacagaatggcgacctgagggacatgagaaaacgtagatggagc
agctcatctgaaagcagcgactatgaaatagatgtcaaacggaaaaggatcggtacaaat
ggagcagcgactaaagaccgtttcagggttcatggaaacgcagacttcgcttcttttgaa
gaaagacccctgaaaatgacagtttttcagaattcgtaa
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integrated database retrieval system
