Xenopus laevis (African clawed frog): 108701593
Help
Entry
108701593 CDS
T01010
Symbol
pms2.L
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03430
Mismatch repair
xla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108701593 (pms2.L)
03460 Fanconi anemia pathway
108701593 (pms2.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xla03400
]
108701593 (pms2.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108701593 (pms2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108701593
NCBI-ProteinID:
XP_018091930
Xenbase:
XB-GENE-6489146
UniProt:
A0A8J0TX93
LinkDB
All DBs
Position
9_10L:complement(111159163..111226610)
Genome browser
AA seq
849 aa
AA seq
DB search
MTDSPSSELAKAIKPIDRKSVHQICSGQVVLSLATAVKELLENSIDAGATSIDIKLKEHG
AESIEVSDNGCGVEEHNFEGLTLKHHTSKIQDFSDLISVETFGFRGEALSSLCALSDLSI
VTCHKTAKVGTRLVYDHNGKIIQKTLMSRQQGTTVSLQQLFYTLPVRHKEFQRNLKKEFT
KMAQVLQAYCIISAGVRINCTNQVGQGKRNPVVCSSGSMSSVKENIGAVFGQKQLQSLIP
FVQLPPSETVCEEYGLNHEATPHGFYNVSGYISRCDHGVGRSSTDRQYFFINQRPCDPAK
VSKVVNEVYHLYNRHQYPFVVLNICVNSECVDINVTPDKRQILLQEEKLLLALLKTSLNA
MFSSSVNKFDMNQTLLDAAGTSRKLNLQVLASPSDHADAPARSSLAVFKLKEAFSHHQAA
HASSPFPKPVKAQQSSPNQRKLLSFFSNNPKECVTNRPSDCIHPEREIKNERGHHQTLGA
DIKVEGDCDSGKGTSSIPDSETGCSTPEMSSHQSGESESGSPEAMGVAESKCVVEHSKAI
LDLEYEHYPEQSDQTDTSIKQSYHIEPVPNCKRAKVEEETLSTAWTVQPDTVDAAMDIQR
RTVPLHFSMNNLTKGMECMKQQQRMKEETERYRRFRAKISPGENQAAEDELRKEISKETF
AKMEIIGQFNLGFIITKLDSDLFMIDQHATDEKYNFEVLQQETVLQGQRLIAPQTLHLTA
VNETVLIDNLEIFKKNGFDFIIDEEAPITERVKLISLPTSKNWTFGQQDIEELIFMLSDS
PGVMCRPSRVRQMFASRACRKSVMIGTALNAHEMKKLVTHMGEIEHPWNCPHGRPTMRHI
ANLDMISQD
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgactgacagtcccagctctgagcttgccaaagcaatcaagcctattgaccgcaagtcc
gtccatcagatttgttctggacaggtggtcctgagtcttgccactgcggtgaaagaactc
ctggagaacagtattgatgctggtgccacaagcattgatataaaacttaaggagcatggc
gcagagtctattgaggtgtcagataatggctgcggtgttgaagaacacaattttgaaggt
ttaaccctaaagcatcatacatccaagatacaggatttctctgatcttattagtgtggaa
acatttggattccgtggagaggctctgagctccctgtgtgcattaagcgacctttccatt
gtcacctgccacaagaccgctaaagttggaactcgtttggtttatgaccacaatggcaaa
attattcagaaaactctgatgtctcgacagcaaggaacaacagtctccctgcagcagctc
ttttacacacttccagtgcgacataaagaatttcagcgaaaccttaaaaaggagtttacc
aaaatggcgcaagttcttcaggcctattgtatcatttcagcgggggttcgcataaattgt
acgaatcaagttggtcagggtaaaaggaacccagtggtatgttccagcggcagcatgagc
agcgtaaaggaaaatataggagctgtgtttggacagaagcagttgcaaagtctgattccc
tttgttcagctgcctcccagtgaaacagtttgtgaagagtatggactaaatcatgaagct
acacctcacggcttttacaatgtttctggatacatctcccgatgtgaccatggtgttgga
cgcagctctacagacagacagtatttctttattaaccaaaggccttgtgatccagcaaag
gtttcaaaggttgtaaatgaagtgtatcatttatacaaccgacaccagtacccgtttgtg
gttctcaacatttgtgtcaattccgagtgcgtagatataaacgtaacccctgacaagagg
cagattttattacaggaggagaagcttttgctggcacttttaaagacctctctgaacgca
atgtttagcagcagcgtgaacaaattcgacatgaatcagacactgttggacgctgcaggt
acttccagaaagcttaatttacaagtgttggcctctccttcggatcacgctgatgcacct
gccagaagctctcttgctgtcttcaaactgaaggaggcattttcccaccatcaagcagct
catgctagctcaccgtttcctaagcctgtcaaggcccagcagtcgtccccaaatcaaagg
aaacttctatcattttttagcaataacccaaaagagtgtgtcacaaatagaccatctgac
tgcattcacccagaaagggagattaagaacgaacgtggccatcatcaaactcttggtgca
gatattaaagtggagggtgactgtgattctggaaagggaaccagctctataccagacagt
gagacgggctgcagtacacctgagatgtctagtcaccagagtggtgaaagtgaatcgggt
tccccagaggcaatgggtgtggctgaaagtaagtgtgttgttgagcattccaaagcaatt
ctggatctagaatatgagcattatcctgaacaatcagatcaaacagatacatcaataaaa
cagtcttatcacattgagccagttccaaattgcaaacgtgcaaaagtagaggaagaaacc
ctttccacagcttggacggtgcagcctgacacagtggatgcagccatggatatccagagg
aggacagtgccattacatttctccatgaataatctaactaagggaatggaatgtatgaag
cagcagcaacgaatgaaagaggaaacagaaaggtatcgcaggttcagagccaaaattagc
cccggtgaaaatcaagctgcagaggatgaactcaggaaagagatcagtaaagaaaccttt
gcaaaaatggaaattatcgggcagttcaacctgggcttcataataacgaaactggattct
gacctgttcatgatcgatcagcatgcgaccgatgagaaatacaactttgaggttttacaa
caggaaacagttttgcaagggcaaagactaattgcgccccagacactacacctaacggct
gtaaatgagactgtgctaattgacaatctggagatttttaagaagaacggattcgatttt
atcattgatgaggaagcccccattacagaacgtgtcaagttaatctctttgccaacaagc
aaaaactggacttttgggcaacaggacatagaggaactcatattcatgttaagcgactcc
ccgggtgtcatgtgtagaccatccagagtgaggcagatgtttgcctccagagcctgcagg
aagtctgtgatgattggaacggcattgaatgcccatgaaatgaagaagcttgtcactcat
atgggagaaattgaacatccatggaattgcccccacggacgacccacaatgaggcacatt
gccaacctagacatgatctcccaagactga
DBGET
integrated database retrieval system
