Xenopus laevis (African clawed frog): 108701644
Help
Entry
108701644 CDS
T01010
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108701644
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108701644
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
U-box type E3
108701644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-CCHC
zf-RING_6
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
108701644
NCBI-ProteinID:
XP_018092045
UniProt:
A0A1L8EYE3
A0A974H4N7
LinkDB
All DBs
Position
9_10L:complement(117341519..117382931)
Genome browser
AA seq
2027 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMSRERLKANDCDLQITNAQTQEEYTDE
SVLIPKNSSVIVRRIPIGGVKTTSKSYVISRTEPQSGPPKSIDDASSSISLAQLTKTANL
VEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCLKPGHYIKNCPTNGDK
NFESVPRIKKSTGIPRSFMVEVEDPNMKGAMLTNTGKYAIPTIDAVAYAMGKKEKPPFLP
EEPASSSEDEDPIPDELLCLICKDMMSDAVVIPCCGNSYCDECIRSALLESEDHTCPTCH
QPDVSPDALIANKFLRQAVNNFKNETGYTKRIRKPQSASSQRQPQPSASSSKAPPPSRPL
TSRQQDPLIAPAASSPPANPTPASTAQSQPTATAAPQANPAAPPPPAAATSLPPRTASPT
DPPIVLPLPVPKEREKPEPLFHSREKVTARSNSSSSAPVNTASCLPLSNTSHVGEKGFHV
PVLGQLPSLLHSHPALPPLLRTNIHRLSAPRPLMGWDSLNRGRHPHNDRPPRNQNPSLGS
SGPAYVHTPPPPLFPPPPPHGLSLPPGVPPPQFPPQFPPGQPPTAGYSVPPPGFPSAPAT
LSAPWVAPAVQSAHTGAHQTPSLAPPLSKEEFYREQRRLKEEEKKKSKLDEFTNDFAKEL
LEYKKIQKERRRSYSRSKSPFSGSSYSKSSYSYSKSRSCSSRSRSYSRSFSRSRSRSFSR
SPSYQRKPHSKGRPRSRSRSHGCPRSRSRSPSYRRYHSRSKSPVYRLPSPAKRVIPQGEA
ERGYLNRYRDIPPYDVKAMYARQPNLRENYEKEQYREWEKYRDLCEKYYKDCAVNAMPRQ
RSPMNRDHFSPSRYVIPPQGRRDNSPYSRGRREEYPPFTHRGRPLGANYPEKLLPRDAHI
VKDVRRSKEKESANVIGDSKGNKHKKHRKRRKGEENEGSSKVEALSSRKTRDLHGDDNKR
AEPVFVPSSKDDATPVRDEPMDAESIALKPLLEKDKREKPKVKQEKTKRKPDTNQSKKES
FSKVVKVEKGGGDGDKDTPAVNEPPAKRVKEESHKGDGTKNPMPQKDDKAALLPRKVHLK
MIKENQDGKPAKEDNPKKEHTKQDKPPSKDEKPKKPTEKPKPTEPKSEKRKRKPDDKLSD
KEQEKTTLKTSKPDTIENAKPSTSKIKSEVEVQKPEKIPEKEKEKEKAVSTTVKKIKLNR
ETGKKIASSEASGPVEVQDKAEPAPAVKSKVERVKGKIRKKVPAPDGSGSTLVDYTSTSS
TGGSPVRKGAEKVDSKRTVIKTMEEYNNDNSTPTEDVIIMIQVPQSKWDKDDYESEEDDK
KDSQDTSSTGKPMSVVTNVSAKPLSITAPGDKDAVPTEKPKSSRDQATESHPQDTKTSKE
LPGTSSSRSKAKEKDSPAASEKDTSEKRKVEGSSECSSRQSSKERLSEKQESSRSSSSKD
FTPNREKKLEPSDSKDRKLEHETRERERKSEHDSRAKKPEHDNRDKKQEQDSRDKKTEHD
NRDKKTEHDSRDRKPEHDSRDRKPEHDSRDRKPEHDSRDKKPEHDSRDKKPEHDSRDKKS
EHDGRDKKSEHDGRDKKPEHDGRDKKPEHDGRDKKPEHDSRDKKPEHDSRDKKPEHDSRD
KKPEHDSRDKKPEHDSRDKKPEHDSRDKKPEHDSRDKKPEHDSRDKKPEHDSRDKKPEHD
KKDKKPEHDSREKDKKQEHDGRDRKIENEAKEKDKKPEHESRDREKKAEHESKDRDSRED
YDSRDYSSSKRREEKKRESSPKGKDSSSSSSQKAKAKDTQIETSRKRPADARLNSSPPRE
RKPRVEQKPSDTKRSPSEQKPNEKSREKSKEKIMKVKSTEESSESKASHSKCTSPEPKTD
KDTSDRDTKGKVPQSRSSRVSSDLTRETDEASFVPDYNESDSEGSVKQEDATASQNKVND
KPALESTEPVDSSITATAHSSPSGSRSPAESLTHSRSSSPSSGGSPDRKRRKKEKKKHKK
HKKHKKHKKHTGNESETEKSQKHKHKKKKSKKNKDKEAEKEESKPPV
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtgcattataagttttcctccaagctcaactacgacacggtcacctttgat
gggctgcacatctccctgtgtgacctgaagaagcagatcatgagtcgagagcggctgaag
gccaacgactgcgacctgcagatcaccaacgcccagacgcaagaagaatacacagacgag
tctgtactaattcccaagaactcgtctgttattgttcgaagaattcccatcggaggtgtg
aagactacaagcaaaagttatgtcataagtcgaacagagccacagagtggaccgccgaaa
tcaattgatgacgcatcttcatctatttctctggcccagctaactaagacagccaatctg
gttgaagccaatgcttctgaagaggataaaatcaaagcaatgatgtcccagtctggtcat
gaatatgatcccatcaactatatgaagaagcctctaggaccaccccctccgtcctacacg
tgttttcgatgtttgaagcctggacattacattaagaactgtcctacaaatggggacaaa
aattttgaatctgttcctcgaatcaaaaagagcactggaattcctcgtagctttatggtt
gaggtggaagaccctaatatgaagggagccatgcttacaaacactggaaaatacgctata
ccaaccatagatgctgtggcttatgctatgggcaagaaagaaaaaccacctttccttccg
gaggaacctgcttcttcttccgaagatgaagaccccattcccgatgaattgctgtgtctc
atctgtaaagatatgatgagcgatgctgttgttatcccttgctgtgggaatagctactgt
gatgaatgtatacgctctgcactgctggaatctgaggatcacacctgccctacgtgtcac
cagcccgatgtttctccagatgctttaattgccaacaaattcttacgccaggctgtgaac
aactttaaaaatgaaacgggatacacaaaaagaattcgtaaaccgcagtctgcttcatct
cagcgtcagccacagccttctgcgtcttcaagcaaagcaccgcctccttcacgtccactg
acctctcgtcagcaggaccctctcatagctccggctgcatcctcacccccagccaatcca
actccagctagtactgctcaaagccagccaacagcaactgctgcaccacaagccaatcct
gctgctcctcctcctcctgctgctgctacttccttgcctcctcggactgcatctccaaca
gacccacctatagtactgccattacctgtccccaaagagagagagaaaccagagccatta
ttccacagtcgggaaaaggttaccgctcggtccaactcttcctcttctgcccctgtcaat
acagcaagttgcttgcccttatcaaacacctcacatgtaggagagaagggcttccatgtt
cctgtacttggccagttaccatccctattgcactctcacccagcactgccaccccttttg
agaaccaatattcacagactttctgcaccaagaccacttatgggatgggatagtctcaac
cggggccggcatccacacaatgatcgtccacctagaaaccagaatccctcccttggatct
tccggacctgcctacgttcatacgcccccacctcctttgtttccaccaccgccccctcat
gggctgtcattgccgcctggagtgccgccaccacaatttccaccgcagttccctcctggt
cagcctcccactgctggctatagtgttccccctccaggcttcccttctgctcctgctact
ctgtctgctccatgggttgctccagcagtgcaaagcgcacacactggagcccaccagacg
ccttcgttggcacccccgttatcaaaagaagagttctacagagagcagcgcaggctaaaa
gaagaagaaaaaaagaaatcaaaacttgacgagtttacaaatgattttgcaaaggagctt
ctagaatataaaaagattcagaaagagcgcagacgatcctattccagatccaaatctcct
ttctctggatcatcatattctaaaagttcctactcttattcaaaatcaagatcatgttct
tcacgttcacgctcctactcgcgatccttcagccgttctcgctcccgttctttctctcgg
tccccttcgtaccagaggaaacctcactcaaaaggtcgcccccgttctagatctaggtct
cacggatgccctcgctccagatccagatctccctcatacagacgttaccactctcgctca
aagtccccagtatacagacttccttcccctgccaagagggtgataccccagggggaggct
gagcgtggctacttaaacagatatcgtgacatacctccctatgatgtcaaagctatgtat
gctcggcagcctaaccttcgagaaaattatgaaaaagagcagtatagagagtgggaaaaa
tatagggacttgtgtgaaaaatattataaagactgtgcagttaatgctatgccgagacag
agatctcctatgaacagagatcatttctctcctagccgatatgtcattcctcctcaaggt
cgtagggacaattctccatacagtagagggcgcagagaagaatatcctccatttacacac
agaggtcgtccattaggtgccaattatccagaaaaactattaccccgtgacgcacacatt
gtaaaggatgttagaagatcaaaagaaaaagagagtgctaatgttattggagactccaaa
ggaaataaacacaaaaaacatcgaaagagaagaaagggggaagaaaatgaagggtcttca
aaagtcgaggcgctctcgtccagaaagacacgagatctacatggagacgataacaaaaga
gctgaacctgtcttcgtaccctcaagcaaagacgatgccacaccagtgagagatgaacca
atggatgcagagtccattgctctaaaacccctgttggaaaaagataaacgagagaaacca
aaagtaaagcaagaaaagaccaagcgcaagcctgatacaaaccagtctaaaaaggaaagc
ttctctaaagtagtcaaggttgagaagggtggtggggatggtgataaggatacgcctgca
gttaatgagccaccagccaagagggtcaaagaggagtcccataaaggtgacggcacaaag
aacccaatgccacagaaggacgataaagctgctttgctaccacggaaggtgcatctcaag
atgatcaaggaaaaccaggatggcaaaccagcaaaagaagacaatcccaagaaagagcat
acaaaacaagacaaacctcctagcaaggatgagaaacccaaaaaacctacagagaaaccc
aagcccacagagcccaaatcagaaaaacgcaagaggaaaccagatgataaactctcagat
aaggagcaagaaaagaccactttgaaaacctctaaacccgacaccatcgagaatgcaaag
ccttcaacctccaaaattaagtctgaggtagaagtacagaaaccagaaaaaatcccagaa
aaggaaaaagagaaggagaaagcagtatccacgactgtcaaaaaaattaaactgaaccga
gaaactggaaaaaagatagccagctctgaagccagtggcccagtagaagttcaagacaaa
gcagaacctgcaccagcagtgaagtccaaagtagagcgtgttaaggggaagattagaaag
aaagtcccagctccagatggttctggctccactttagttgattataccagtacaagttcc
actggagggagccctgtgcgaaaaggggctgaaaaagtggacagtaagagaacagtgata
aagacaatggaggaatacaataatgacaattctactccaactgaagatgtcatcattatg
attcaggttccccagtccaagtgggataaggatgactatgagtctgaagaggatgacaaa
aaggattcccaagacacatctagcactgggaagcctatgagtgtagtgacaaatgttagt
gctaaacctttatccattactgcccccggcgacaaagatgctgtgcctactgaaaagccc
aagtcatcccgtgaccaggctactgaaagtcatcctcaagataccaaaacttcaaaggaa
cttccaggaacatccagcagcaggagtaaagccaaggaaaaggatagtcctgctgcttcc
gagaaggacacatctgaaaaaaggaaagtagagggcagttccgaatgcagtagtcgccag
tcttcaaaagagaggctgtcggaaaagcaagaatcaagtcgtagcagctccagcaaagac
ttcacccccaaccgggagaagaaattagagccttctgacagcaaggacagaaagctggag
catgaaacgagagaaagggaaagaaaatcagagcacgatagcagagctaagaagccagag
catgacaacagagataagaagcaagagcaggacagcagagacaaaaagacagagcacgac
aacagagacaaaaagacagagcatgacagcagagacaggaagccagagcatgacagcaga
gacaggaagccagagcatgacagcagagacaggaagccagagcatgacagcagagacaag
aagccagagcatgacagcagagacaaaaagccagagcatgacagcagagacaagaagtca
gagcatgacggcagagacaagaagtcagagcatgacggcagagacaaaaagccagagcat
gacggcagagacaagaagccagagcatgacggcagagacaagaagccagagcatgacagc
agagacaagaagccagagcatgacagcagagacaagaagccagagcatgacagcagagac
aagaagccagagcatgacagcagagacaagaagccagagcatgacagcagagacaagaag
ccagagcatgacagcagagacaagaagccagagcatgacagcagagacaagaagccagag
catgacagcagagacaagaagccagagcatgacagcagagacaagaagccagagcatgat
aaaaaagacaagaagccagagcatgacagcagagaaaaggacaaaaagcaagaacatgat
ggcagggatagaaaaattgagaatgaagcaaaggaaaaggacaagaagccagagcatgaa
agcagagatagggaaaagaaagcagagcatgagagcaaggatagggatagtagagaggat
tatgacagtcgcgattacagcagctctaagaggcgggaagagaagaaaagggagtcttca
ccaaaaggcaaagattcatcatcttctagctctcaaaaggctaaagccaaagacactcag
attgaaacctcaaggaaacgtcctgcagatgcccgacttaactccagcccacctcgagag
cgcaagccacgtgtggagcaaaagccctctgacaccaaacgctctcccagtgagcagaaa
ccaaatgagaaaagcagagagaaaagtaaagagaaaataatgaaggtaaaaagtacagaa
gaatcaagcgagagtaaagcttctcactctaagtgcacatcgccagagcccaagacagac
aaggacacgagtgacagggacactaaaggaaaggtccctcaaagccggtcctcccgagtc
tcttctgacctgaccagagagaccgatgaggcctcctttgtaccagattacaatgagagt
gatagtgaggggtcagtaaagcaggaagatgccactgcctcccaaaacaaagttaatgac
aaacctgcattggaaagtacagaaccagtagactccagtataactgcaactgcccatagc
agcccaagtggcagtcgcagcccagcagagtcgctgactcatagccgcagcagcagcccc
agttctggaggcagcccagataggaaacggcggaaaaaggagaagaaaaaacacaagaag
cataagaaacacaagaagcataagaagcacacgggcaacgaatccgagactgaaaagagc
cagaaacacaaacacaaaaagaaaaagtccaaaaagaacaaagacaaggaggcagagaaa
gaggaatccaaaccacctgtgtaa
DBGET
integrated database retrieval system
