Xenopus laevis (African clawed frog): 108701684
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Entry
108701684 CDS
T01010
Symbol
rai1.L
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108701684 (rai1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108701684 (rai1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
zf-ANAPC11
Vps8_C_schizo
Motif
Other DBs
NCBI-GeneID:
108701684
NCBI-ProteinID:
XP_018092114
Xenbase:
XB-GENE-17337232
UniProt:
A0A1L8EYP3
A0A974H4D6
LinkDB
All DBs
Position
9_10L:122442556..122557548
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AA seq
1816 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQPTSQESSRLENYRHQSQPALNCERHREVTKNYYAHTSYQGYE
NSVGEKYPRDDKHIIVQQLQGRVSFASFSEGNVYPGHYTGEDGLQNWAQSQTLGGTKYEE
NLIKKTPGEGRGYQDPAGQNPFRSHSLHHPQQQALPYAKIPRQKVQNNVPSSPLSFSQAS
HFNQSFPTSTYSTVTGGSQVSHTYKSCTAPSNPQHDHNMAAAGQLVQAMHGYQSTRMTSY
EQPQLHHAQETLHYQNMAKYQHYSQQNQTYCQSETPSRTPEQYYQPFSPSASHSPARSVG
RSPSYSSTPSPLMPNLDSFQYNQQQQQHNTGTFPLSMTDHSHYMPLINPSPTGTSSPESQ
SKSLQNDKLPETLLSDLSLQSLTALTSQVENISNTVQQLLLSKSGVPQKKVIKASPRTPE
QVKGQHCSPENSTYSSEQIGTPLSEALGTPQSVHTEIPDTDYLSGSEDQLERNYLYCGSA
QSPARANNSKMKPESISTCSVTSPDNMSTKSDDSFQSIRASLPLETFAKLVSSERECPHL
LVNALSQEELSTEIIALQDAIDNEKAEKAWVDSPVLSNDSPKSPLNLENSSACVESAMQT
WSGQENVETFPEDLKKSITEEAKSRNQDMCYSDKSIEREELPPETTEVTKILVNSGSLCS
DKNITATASSASYTSSSDTSASTTCSKTMDPFGWTDKNITESCLRWKDLELSLHESDLEK
DLFQVKDNKIDCQLDVPDVETPLENDSSEEFNKEGAGDLAYTDIGKTDNEKWLEDTRDCY
TEEDFQDIPDIPSQKESNLEPEDYSSLCDFSDRKSFIYDNSPSKPLKDMETVSSINTPES
VENPSLEEKENSAPSQLSGHSIILLGPAVATESKVESWFESTITHIKTVGDIKEKNEEDA
EACALEPLTLPDREIKDLKVQDYQLDVKAEEPLERKPRCRKKNPCRAVEVVQSDKVAQNP
VGETAKADNEKAQEEAPNTMAIVPVAKTPAVEVMLARMCTRSSTAKADLQVNGGAVGPPP
LHQDKTNRKGAFNVKETASFKSGRRGGKAAVVSHCDRKNFMLQSKSPSKLSSQKAKGNNI
ELLKDEKSMILRSRSKKQELFQTKRRKGKRGMSMVIKKRASLKKILANNCTVPDTYKLIP
KVKQRMKLSNSGVPSNAKVSDRRLHSLKRKPNFISPVPAKKKNLILRSKNVTEEKSEPTP
HLFKKIRAMKKEKVKVTIAAKKTCKVILKTPSVHVTPEVCIKVSSRSSYAGAVKTKVLPP
RKGRGLKLEAIVQKMTSPNQKKQGILGACLYNVVTVGGNNLNALTPGKELRELSSVSADN
ETRMVSQNNALSAPDLHSLSCRGSNSRSLKGTQLHRKKQASSSLHCTSTHRGTEQEGNYI
KAKRLSTVPKRRIRRGRSKGALNSSKNVSKRQIGASPSVLLTSKDKTLSESVHQTNKCKK
PMLKETSSVPSRVEESSSQVQARKKTKYASFNGYTKRQRKCAPQNKPAKQTTGSKRTGRR
KSVPVISPKEPEIKLKYVSAKPVRSESRVRPFSPYVQVEEKNEYTTTCTVINTVVEESRL
LKERSIMHSVPHSSFASSRTLPLSSRMQLGPLVCKAVPSGCLVCCLCRNPANFKDLGDLC
GPYYPMDCLPNKKLRPKDKFRIGELPVEKTPKMSDSVCTVGSGRAPSLDSGELDLSNHTN
LRTSARALLRKLPSCYCCSKKVEITETEKPRRYPCSKTLEPPFPELETQEHWVHEACAVW
TSGVYLVAGKLYGIHEAIQMAANGLCPKCQRPGATVGCSHKACEQSYHFTCAVEAGCLLS
EENFSLRCPKHKKHLV
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgggaaaggtgtggtttccatggcaaccaacagaactaccaaccaaca
tcacaagagtcatcacgcctggagaattaccgacatcaaagtcagccggcactcaactgt
gagcggcacagggaggtgaccaaaaactactatgctcacacatcctaccaaggctatgaa
aacagtgtgggggagaagtaccccagggacgacaagcacatcattgttcagcagctgcaa
ggaagagtgtcttttgccagtttctcagagggtaatgtgtaccccggacattatacaggg
gaagatggactacagaattgggctcaatctcagactttgggtgggaccaaatacgaggaa
aacctaataaaaaagacacccggggaaggaaggggttaccaggatccagctgggcagaac
ccgttccgctcacattcactgcatcacccacagcaacaggccctgccctatgccaagatt
cccaggcagaaagttcagaacaatgttccatcctctcctctatccttttcccaagcctcc
cacttcaaccagagtttcccaacgtcaacctattccacagtcacagggggaagccaagtc
tcccacacttacaagagctgcacagccccctccaaccctcagcatgaccacaacatggct
gcggcaggtcagctggttcaagcaatgcatggctaccagtcaactcgaatgacttcttac
gaacagccacagctccaccatgctcaggagacactgcactaccaaaatatggccaaatat
caacactacagtcaacagaatcaaacttactgccaatcagagactcccagtcgaactcca
gaacagtattatcagccgttcagtcccagtgccagccactcaccagcacggtcagtgggc
aggtccccatcttacagctctactccctctcctctcatgccaaaccttgatagctttcaa
tataaccaacagcagcagcagcataacactggtacatttccattaagcatgaccgaccac
agtcattacatgcctcttataaatccatcacccacaggaacgtccagtccagagtctcag
agtaaaagtctgcaaaatgacaaattaccagaaaccttgctgtctgatcttagcctgcaa
agcctcacggctctgacatcccaagtggaaaacatctccaacaccgtgcagcagctgctt
ctttctaaaagtggagttcctcagaagaaagtgatcaaggcgtctccaaggactcctgag
caagtaaaggggcaacactgcagcccagaaaacagcacatattcttctgagcagattgga
actcctttatctgaggcacttggtacccctcagtctgtgcacactgagattccagataca
gactatctcagtggctcagaggaccaacttgaaaggaactatttgtactgtggttcagcc
caaagcccggcaagggccaacaattctaaaatgaaaccagaatctatttctacttgttct
gtaacttcaccagataatatgtctacaaagtcagatgattcttttcaaagtatccgggcc
agccttcctctggagacctttgctaaactggtaagcagtgagagggaatgcccacattta
ttggtcaatgccctttcccaggaggagctatcaactgaaattatagcccttcaagatgct
attgataacgagaaagcagagaaggcctgggtggattcccctgtcctcagtaacgattcc
ccaaaatctcctttaaatctggaaaacagctcagcttgtgtggagtctgcaatgcaaacc
tggtcaggccaagagaatgtagagacatttcctgaagatttaaagaaaagcattacagaa
gaagccaaatcaaggaaccaagacatgtgttacagcgacaagtctattgaaagggaggaa
ttacccccagaaactactgaagtgactaaaatccttgtcaattctggcagtttatgttct
gataagaatattacagccacagcatcgagtgccagttacaccagctcctctgatacatct
gcaagtaccacttgttcaaagacaatggatccctttggctggacagataaaaacataact
gaatcatgcctaaggtggaaagacttagagcttagcctgcacgaatcagatcttgaaaaa
gatttattccaggtcaaggataataaaattgactgtcagctcgatgttcctgatgttgaa
actcctcttgaaaatgactccagtgaggagtttaacaaggagggagcaggagacttggcc
tacacggacattggtaagactgacaatgagaagtggcttgaagatactagagactgttat
actgaagaagactttcaagacattcctgatatcccatcgcaaaaagaatccaacctggag
ccagaagattattcttcattgtgtgatttttcagatagaaaatctttcatttatgacaat
tccccttcaaaaccactaaaggacatggaaactgtatcttccataaataccccggagtct
gtagaaaacccaagccttgaggagaaagaaaattcagctccatctcagctttctggtcac
tccatcatcctacttggtccagctgtggccacagagtctaaagtggaaagttggtttgaa
tccactataacacacattaaaactgtgggggacataaaagaaaagaatgaagaggatgct
gaagcctgtgcacttgaacctctaaccctcccagacagagaaataaaagaccttaaagtg
caggattatcagctggatgtgaaagctgaagagccactcgagaggaagcctcgttgccgt
aaaaagaatccatgcagagcagtagaagtggttcagtctgacaaagtggctcagaatcct
gtcggtgaaacagctaaggcagataatgagaaagcacaagaggaggctccaaatacaatg
gccattgttccagtggccaagactccagcggtagaagtaatgctggcaagaatgtgtacc
cggtcttcaactgcaaaggcagatctccaggtgaacgggggagcagtggggcctccacca
ctccatcaagacaaaacaaatagaaagggagcgttcaatgtaaaggaaacagcctctttc
aaaagcggtagaagaggtggaaaagctgcagtggtatctcattgtgacagaaaaaacttt
atgcttcaaagcaagtcaccaagcaagctcagcagtcagaaagctaaaggaaacaacatt
gagcttctcaaggatgaaaagtctatgattctgaggtctcgcagcaagaagcaggaactc
ttccaaaccaaaaggaggaaaggaaagagaggaatgagcatggttattaaaaagcgagca
tccttaaagaaaatcttggctaacaactgcacagttccagacacgtacaagttgattcca
aaagtcaaacaacgcatgaagctttcaaactcaggtgttccgagcaatgccaaggtgtct
gaccgacgtctgcattctctgaaacggaaaccgaactttatatccccagtacctgccaaa
aaaaagaacctgatcttacgcagcaaaaatgtcacagaggaaaaatcagagccgactcct
cacttatttaaaaagattcgggcaatgaagaaagaaaaggtcaaggtgaccattgcggca
aaaaagacatgcaaggtcatcttaaaaacaccttctgttcatgtgacaccggaggtgtgc
ataaaggtgtcctcccgttcatcatatgcaggggcagtaaaaacaaaagttctgcctccc
agaaagggcagaggcctgaaactggaggctattgtacaaaagatgacctccccaaatcag
aagaagcagggtattctcggtgcttgcttatacaatgttgtgacagttggtggcaataac
ctgaatgcacttacaccaggaaaagagctgagagagcttagttcagtctctgcagacaat
gaaactaggatggtaagtcaaaacaatgcactgtcagcacctgatctacattctctgagt
tgcagaggctccaacagtaggtccttaaaaggaacacaattgcacagaaagaaacaggcc
tcatcttccctccactgcactagcacacatagagggacagagcaagagggcaattacatt
aaggcaaaaagactcagtacagttccaaaaaggagaatcagaagagggaggtccaagggt
gccctgaatagctccaaaaatgtatcaaaaaggcagattggggcttctccttctgtccta
ctgacatctaaagacaagaccctttcagaaagtgttcatcaaaccaacaagtgcaaaaag
cctatgcttaaggagacctccagtgttccgagtagagtggaagaatcctcttctcaagta
caagccaggaaaaaaacaaagtatgctagcttcaatggttacactaaaaggcagcgcaaa
tgtgcgccccaaaataagcccgcaaagcaaactacagggagcaaacgtacaggtaggaga
aagagtgtccctgtcataagcccgaaggaacccgaaatcaagctgaaatatgtctccgct
aaaccagtgcggtcagaaagtcgggtccgaccattctcaccttacgttcaagtggaggag
aagaatgaatatactacaacctgtacggtaataaatactgttgtggaagagagcaggctg
ctcaaggagagaagcatcatgcattcagttcctcactcctcatttgcaagttctcgaact
ttgcctctctcctcaagaatgcaactagggccactagtatgtaaggcggtgccctctggt
tgccttgtctgctgcctctgtcggaaccctgccaatttcaaagacttgggggacctttgt
gggccttattaccctatggactgcctacctaacaaaaaattaaggccaaaggataagttc
agaataggagagttgccagttgagaaaactcccaaaatgtcagacagtgtctgtacagtg
ggtagtgggagagcaccttccttggacagtggggaacttgacttaagtaatcacaccaac
ctacgaaccagtgctcgagctttgttgaggaaattgcccagctgttactgctgcagcaaa
aaggtggaaataacagagactgagaaaccaaggagatatccgtgcagcaagacccttgag
ccaccttttccggaactggaaacccaggaacactgggttcatgaggcgtgtgctgtatgg
accagcggagtttacctggtggcaggaaagctgtacggcatccatgaggcaattcagatg
gcggccaatgggctgtgtcccaagtgtcagaggccaggagccaccgtgggttgcagccac
aaggcatgcgagcagagctaccacttcacgtgcgccgtggaagcagggtgcttactaagc
gaagaaaatttctccttgcgatgccccaaacacaagaaacacctggtgtaa
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integrated database retrieval system
