Xenopus laevis (African clawed frog): 108702186
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Entry
108702186 CDS
T01010
Name
(RefSeq) interferon a3
KO
K05414
interferon alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04060
Cytokine-cytokine receptor interaction
xla04217
Necroptosis
xla04620
Toll-like receptor signaling pathway
xla04621
NOD-like receptor signaling pathway
xla04622
RIG-I-like receptor signaling pathway
xla04623
Cytosolic DNA-sensing pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108702186
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108702186
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108702186
04621 NOD-like receptor signaling pathway
108702186
04622 RIG-I-like receptor signaling pathway
108702186
04623 Cytosolic DNA-sensing pathway
108702186
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108702186
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xla04052
]
108702186
Cytokines and neuropeptides [BR:
xla04052
]
Cytokines
Interferons
108702186
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Rdx
DUF6809
DUF4637
Motif
Other DBs
NCBI-GeneID:
108702186
NCBI-ProteinID:
XP_018093182
UniProt:
A0A8J0U158
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Position
9_10S:8146909..8150141
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AA seq
185 aa
AA seq
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MNHMMSRPLLLLLSLISIVHCRNCKWLHPKQEYLNIQILQTFSQLTPPKEFDIVCHDYPT
AQPNLERLYNITQVEAAALAVREVLNETIRFYRKHHESMGCKQQAWERFQQLLYYQIHQL
EGCVPETGENDLLKNKISEQFQQWEKNVAEQDKASCAWDFIQDEIRRNLHLALQLSSRLR
RQHLL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatatgatgtctcgaccattattgctgttgctcagtcttatctccattgtccat
tgccgaaactgcaaatggcttcaccccaaacaggaatatctcaacatccaaattctccaa
accttcagccaattgactcctcctaaagaatttgacatagtctgccatgattatcccacc
gcacaacctaatttagagagactctacaatatcacacaggtagaagccgcggctctcgct
gttagagaagttctcaatgaaaccatcaggttctacaggaaacaccatgagagtatgggg
tgcaagcaacaagcctgggaaaggtttcagcagcttctctactatcagattcaccaactg
gagggctgtgtcccagagacaggagaaaacgatctactgaaaaataaaatatcagaacaa
tttcaacagtgggaaaaaaatgtagcggaacaggacaaagcatcgtgtgcctgggatttt
atccaagatgaaatcagaaggaatttacatctcgctctacagctctcctcccgcctgaga
aggcaacacttgctctag
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