Xenopus laevis (African clawed frog): 108702319
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Entry
108702319 CDS
T01010
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108702319
04020 Calcium signaling pathway
108702319
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108702319
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108702319
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108702319
NCBI-ProteinID:
XP_041433828
UniProt:
A0A8J1LWG0
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Position
9_10S:complement(103676809..103841232)
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AA seq
2306 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDTNCMSERCNILEAFDGFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNWLDFFIVMVGMLEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFMDTNFVMSYNLSSLRPYYQVDEAED
NPYICSSNRDNGMSKCQDLPPKMDCSHVYYSDFGSGNSCVNINQYYNVCRPGEFNPHKGA
INFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVI
ATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRL
YSNWQNKRRKKVQPNSNMNGQERHRKCKRRITSIHHLIHHHHHHHHHHYHISNGSPRGPR
PSPEICDVEMKIMKPNNQLRLPTASPTQSISPNSESVHSIYHADCHLEAPQRKSSKSSNA
SSNIRLNVGLNHSNYPTIMPSQANKTSPSTLPKGKRNVSNVVSLLSSPVSMKVDSFGKTN
HLVGEHGLCRSSSKLSGLSVSCSLPSPQPSSLLCEIQNCPYCANILENPDLEFSDSESCE
SDSNGVYEFTQDLRHGDQRDQVQKGKKLKKKPKEANKVYKLWEEFTVRLKRIVDSKYFNR
GIMIAILINTLSMGIEYHEQPEELTNALEISNIVFTSMFALEMLLKLLAFGIFQYIKNPY
NIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLVKTMDNVAT
FCMLLMLFIFIFSILGMHLFGCKFTWTADTGETVKDRKNFDSLLWAIVTVFQILTQEDWN
MVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRSDTEEDKASGN
FDEDLEKLKELRAAELKMYSLAVTPNGHLDPRSSMPPPIIMRTAATPMPTPKSSPCMDSS
HPFGDSRRESNVSMDPSICDQKSLTSLRSTPCTPWGTYSNWGSRRSSWNSLGRAPSIKKK
SQSGERESLLSGEGKGSTDDDSDDCKSSPVTRVSLHRRAGSLDTRGSLDIPDFLQVPTLR
HSLSVSPLAMVPSDYQDCNGKMMHVPSDLFVRVEKHREDPLDYEDDIEDSYCFRIRKILE
PYKPTWCKTHEDWSLYMFSPQNQFRMMCQKVIAHKMFDHVVLVFIFLNCITIALERPDID
SNSLERIFLSVSNYIFTAIFVLEMTIKVVALGFVSGENTYLQSSWNVLDGVLVFVSIIDI
IVSLASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCA
FFIIFGILGVQLFKGKFYYCEGLETRNITNRSECTRARYKWVRRKYNFDNLGQALMSLFV
LSSKDGWVNIMYDGLDAVATDVQPVKNHNPWMLLFFISFLLIVSFFVLNMFVGVVVENFH
KCRQHQEAEEARLREEKRLRRLEKKRRSKALYMSEAQRRPYYAEYSPARLYIHTMCTSHY
LDLFITCIICINVITMSMEHYNQPKSLDEVLKYCNYVFTIIFVFEALFKLVAFGFRRFFK
DRWNQLDLAIVLLSIMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRAL
LDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNEENPCEGLSRHATFENFGMAF
LTLFRVSTGDNWNGIMKDTLRECNSDDKHCLSYLPLISPVYFVTFVLIAQFVLVNVVVAV
LMKHLEESNKEAKEDAEMDAEIEMEMSRMLTPVTGGCTPASDGKGTEGGQDPAKMELPVL
LKQARDRDFHKRDGLGSLNLLAVKKISVSRMLSLPNDSYMFRPVLPAKSSYTLREVETAE
DNSRHGSIASLHSQPRENNSLLKVPVESQPQPSVSNHQDSDMPKIPPPRASSRSPSLNRS
LRRQEAIHMDSVDQGGDSKDKDLDVESTESLQLGTPLVTTLVPNLLCSLNVSLQGTPQSS
PKLSSQLRHSSVLTHNHVYSQHSIPSRPSSVSSGNSNPEESMFESSDLADEEVNHINSSA
KGCRGLSNNRTHSVSPFISQSSSPPPLPPSLKNCNSTVSLAGSSSKDKDLKKFYSVDTQG
LLAKPCWGEDQRRHSIEICPSIDDGDSCFDLSMEDKHCSSVLIRSDPEYINGVRRKKKMS
PPCISIDPPMEDEGGTASRTKASQNSMRLRRRTPSCESAAYRDSLDLSDNQLGDQISKTD
RRTPVPCRNEHLIIPSYSYDQVDGNGFSDRLSNSGGSTPSPVFNESVSLEMKQKDHKDLS
GVSKGSLKTALEHISNPTEDIIDNPL
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcattttgctgaactgcgtcaccctggggatgttccagccttgcgaggataca
aactgtatgtcagagagatgcaacattcttgaggcattcgatggcttcatctttgcattc
tttgcagtggagatggttattaagatggtagcgcttggcatctttgggcagaagtgttac
ctaggagacacgtggaattggctggatttcttcatcgtcatggtggggatgttggaatat
tctctcgacggacacaatgtcagcctgtccgctatccgcactgtacgtgttttaaggcct
ttaagagccattaacagggttcccagtatgaggatactggtgaccctgctgctagatact
ctgcctatgttaggcaacgtccttctcttgtgtttctttgtgtttttcatctttggaatc
gtcggcgttcagctttgggctgggctactgcgcaacaggtgttttatggatacaaatttt
gtaatgagttacaatctctcctctctgaggccgtattaccaggtggatgaggcagaggac
aacccttatatctgctcttctaaccgagacaatgggatgtcaaaatgccaggacctccct
cccaaaatggactgctcccatgtgtactactcagattttggcagcgggaatagctgcgtt
aatattaatcaatactacaacgtatgcaggccgggagagttcaatccacataaaggggcc
attaattttgataacattggctacgcctggatagctatttttcaggttataaccctagaa
ggatgggttgatatcatgtactatgtcatggacgcacattctttttacaattttatatat
tttatactacttataatagtggggtctttcttcatgataaacttgtgcctggttgtgata
gcaacacagttttctgaaacaaagcagcgagagaaccagctaatgcaggagcaacgagct
cgttacctctccaatgacagcacaatcgccagcttttcggagccagggagctgctatgag
gagcttctcaaatacatctgccacatcttcaggaaggttaagagaaggacgttaagactt
tatagtaattggcagaacaagcggaggaaaaaggttcagcccaacagcaacatgaatggc
caagagcgtcaccgcaaatgcaagcggcgtatcacctccattcatcacttgatacaccac
caccatcatcaccaccaccatcattaccacattagcaatgggagtccacggggtcccagg
cctagtccggagatctgtgatgtagagatgaaaatcatgaagccaaataatcaacttagg
cttcctacagcatcccccacccaaagcatttcacccaacagtgaatctgtccacagtatc
taccatgctgactgccatttagaggctcctcagcggaaatcaagcaagtcttccaatgcc
tcctcaaacataagactgaatgttgggttaaaccacagcaactatcccaccatcatgccc
tcccaagccaacaaaaccagcccttccacattacccaaaggaaaaagaaatgtcagcaat
gtagttagtttgctaagcagcccagtcagtatgaaggtggattcttttgggaagaccaac
cacctagtaggagagcatggcctgtgcaggagttccagtaagctttctggattgagtgtg
tcatgttccttgccaagccctcaaccaagctctcttctgtgtgaaatccaaaactgccca
tactgtgcaaacatcttggagaaccctgatttggagtttagcgactctgagagttgtgaa
tcagattctaatggggtctatgaatttacccaggacttgaggcatggagaccaaagagac
caggtgcagaaaggaaaaaagctcaagaagaaaccaaaggaggccaacaaggtgtataaa
ctctgggaagagttcaccgtccgactgaaaaggattgtagacagcaaatatttcaaccgc
gggattatgattgccatcttgatcaacacgctgagcatggggattgaatatcatgagcag
ccagaagaactgactaacgccttggaaatcagcaatattgtgttcaccagcatgtttgcg
ctggagatgctgctgaagctcttggcctttggtatctttcaatacatcaagaatccgtac
aacatctttgacgggatcattgtcgtcatcagtgtgtgggaaatcatcggtcaatcagac
gggggtctgtctgtgcttagaacgttccggctccttcgcgtactgaagctggtgcgattt
atgccagcgctgcgtcgtcagttggtggttctggtgaagactatggacaacgttgccacc
ttctgcatgcttcttatgctcttcatttttatcttcagcatccttggcatgcatctgttt
gggtgtaagtttacttggactgcagacaccggagagacagtcaaagacagaaagaacttt
gattccttgctttgggcgattgtcaccgtcttccagattctcacccaagaagactggaat
atggtcctgtacaatggcatggcttccacctcctcctgggcagcgctctactttgtggcc
ctcatgacatttggaaattatgtgcttttcaacttgttagtagccatcttagttgaaggc
ttccaagcagagggggatgcaacaaggtcggatacagaggaggacaaggcatcgggcaac
tttgatgaagacctggagaaactaaaggagcttcgtgctgcagaactaaagatgtactcc
ctcgcagtaacaccaaacgggcatctcgaccctcgaagttccatgccccctcctataatc
atgcgcacagccgccaccccaatgcccacaccaaagagctccccttgcatggattcatct
catccatttggtgattcaaggagggaaagtaacgtctcgatggacccatcaatctgcgat
cagaagtctttgaccagtctacgcagcacaccttgtaccccttggggcacttacagcaac
tgggggagccgtcgctcaagctggaacagtctgggaagagctccaagcatcaaaaaaaag
agccagtcaggggaaagggagtccttactctctggtgaaggaaagggaagcacagatgat
gactccgatgactgcaagtcaagcccagtgacaagggtatctctccatcgcagggcaggt
tctctggacacgagaggttctttggatatccccgatttcctgcaggtgcccacattacgt
cattccctaagtgtcagccctttggccatggttccctcggattatcaagactgcaatggg
aaaatgatgcacgtgcccagtgatctgtttgtgcgggtggagaaacatagggaggacccg
ttggattatgaagacgacatagaagacagttactgtttccggattcgaaagatattggag
ccatacaaacctacatggtgtaagacgcatgaagactggtccctctacatgttctcgcct
caaaaccagttccgaatgatgtgccaaaaagtcattgcccacaagatgtttgaccacgtg
gttcttgtctttatcttcttaaattgcatcaccattgcacttgaacgacctgacattgac
tccaatagcctggaacggatattcttaagtgtctccaactacatctttactgcaatcttt
gttttagaaatgacaatcaaggtggtggccctgggcttcgtctccggggagaacacttac
ctgcaaagcagttggaacgtgcttgatggggttctcgtctttgtttccatcatcgatatc
atcgtgtctcttgcctctgccgggggggcaaagattcttggaatcttgcgggtactgagg
ctgttgcggactctgcgcccacttagggttatcagccgagccccaggcctgaagctggtg
gttgagactctcatcacctcactgaggcccattggcaacatcgtccttatctgctgcgct
ttcttcatcatctttggcattcttggagtacagcttttcaaaggcaagttctactactgt
gaaggactagaaacacggaacatcaccaacaggtcagagtgcacccgggcccgttacaag
tgggtgcggcgcaagtacaattttgataacctgggccaggcactgatgtcgctctttgtc
ctctcctccaaagatggttgggtgaatatcatgtacgacggcctggatgctgttgccaca
gatgttcagccagtcaaaaaccacaacccatggatgcttctgttcttcatctccttcctc
ctcatcgtcagcttcttcgtgctcaacatgttcgtaggggtggtggtagagaacttccac
aagtgccgtcaacaccaagaggcagaagaggcccggctcagggaggagaaacgcctccgc
cgcctggagaaaaagcgcaggagtaaggcgttgtatatgtctgaggcccagcggagaccg
tattatgcagagtactcgccggcgcgcctctacatccacaccatgtgcaccagccactac
ctggatctctttatcacctgtattatttgcatcaacgtcatcacaatgtccatggaacac
tacaaccagccaaagtccttggatgaagttttaaaatactgcaactatgtgttcaccatc
atcttcgtgtttgaggccctgttcaagcttgtggcatttgggttccggagattttttaaa
gacaggtggaaccaactggacttagccattgttttgctctccatcatgggaatcacacta
gaggagattgagattaacgcctcccttcccatcaatccaactatcatacgcatcatgagg
gtgctgaggattgctcgagtgttaaagctcctgaaaatggccaccgggatgcgagctttg
ttggatactgttgtgcaagccttacctcaggtaggcaacctcggcctgctcttcatgctc
ctgttcttcatctacgcggccttgggagtggaactgtttggaaaactcgtgtgcaacgag
gagaatccctgcgagggactgagccggcacgcaacatttgagaactttgggatggctttt
ctgaccctcttccgcgtctccacaggggataactggaatggcatcatgaaggatactcta
cgggagtgcaacagcgatgacaagcactgtcttagctacctgcccctgatctctcctgtc
tattttgtaaccttcgtgctcattgcccagtttgtcttggtcaatgtggttgtggctgtg
ctcatgaaacatctggaggagagcaataaagaggccaaagaagatgctgagatggatgca
gagattgagatggagatgtccaggatgctgacaccagtgaccggtggctgcactccagcc
tcagatggcaagggaactgaaggaggacaagatccagcaaagatggaactacctgtgctg
ctgaaacaagccagggatagggatttccacaagagggatggattaggttccctaaaccta
ctggctgtcaaaaagatctcagtatccaggatgctctccttacctaatgacagctacatg
tttcggccagttctaccggcaaagtcatcttatactttgcgagaagtggaaaccgctgaa
gataattcacgacatgggtctattgcctctctacactcccagcctagggaaaacaactcc
ttgctgaaagtaccagtggagtcccagccacagccctctgttagcaaccaccaggactct
gacatgcctaaaattccaccacctcgtgcgtcctcaagatctccaagtctaaacagatcc
ctgagaagacaggaggctatacacatggactcagtggatcagggcggtgattctaaggac
aaggaccttgatgtggaatctactgagagtttgcagctggggactccattggttactact
ttagttccaaatctgctgtgctccttaaatgtgtctctgcagggaacccctcagtcctca
cccaagctatcttcccagctcagacattccagtgtcctcacacacaatcatgtgtacagc
caacacagtattccaagtcggccttcaagtgtcagtagtggcaacagcaatccagaggaa
tctatgtttgagtcctcagacctggctgatgaagaagtcaaccacataaacagttcagca
aaggggtgtagaggattgtctaataatagaactcactctgtgtctccgttcatctcccaa
tcttcatctcctcctcctcttcctccatcactaaagaactgcaatagcacagtcagcctg
gcagggtccagcagcaaagataaagacttaaagaagttctatagtgttgatactcaagga
ttattagctaagccctgctggggggaagaccaaaggaggcactcaattgaaatctgccct
tccattgatgatggagattcctgctttgacctgtccatggaggacaaacattgctcttct
gttctcattcggtctgaccctgaatacatcaatggagttcgtcgaaagaagaagatgagc
cccccttgcatttctatagaccctcctatggaggatgaaggtggcacagcttcacgtacc
aaagcatcacaaaacagcatgaggttacgaagaaggaccccatcttgtgaatctgctgca
tacagggactctttagatctaagtgacaaccagcttggggatcaaatatctaaaactgat
agacgaaccccagtgccctgtcgcaatgaacacttgatcatacccagctactcatatgac
caggtggacgggaatggtttctcagaccgtctgtctaacagtggaggttctactccgtca
cctgttttcaatgaatctgtgtctttagagatgaaacaaaaagatcataaagatttaagc
ggtgtctctaaaggttctttgaaaactgcactagaacacatatccaacccaacagaggac
ataatcgataacccattatag
DBGET
integrated database retrieval system
