Xenopus laevis (African clawed frog): 108702539
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Entry
108702539 CDS
T01010
Symbol
atxn7l3.S
Name
(RefSeq) ataxin-7-like protein 3 isoform X1
KO
K11363
SAGA-associated factor 11
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
108702539 (atxn7l3.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108702539 (atxn7l3.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108702539 (atxn7l3.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
108702539 (atxn7l3.S)
SLIK complex
108702539 (atxn7l3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
SCA7
zf-C2HC_2
TIP41
Motif
Other DBs
NCBI-GeneID:
108702539
NCBI-ProteinID:
XP_018093554
Xenbase:
XB-GENE-17331200
UniProt:
A0A1L8EL43
A0A974H098
LinkDB
All DBs
Position
9_10S:4876749..4889768
Genome browser
AA seq
344 aa
AA seq
DB search
MKMEDMSLCGLDNSKLEAIAHEIYTDLIEDTCLGLSFEVHRAAKCGYFLLDETDPDSVKD
FEIIDQPGVDIFGQVYNQWKSKECVCPNCNRSIAASRFAPHLEKCLGMGRNSSRIANRRI
ASSNNMNKSESDQEDNDDVNDNDWSYGSEKKGAFNASGAKKRKAEKNPNSPRRSKSLKHK
NGDLSVNSDPFKYNSSSGISYENLGPDELQTLLTTQCGVISEHTKKMCTRSHRCPQHTDD
QRRSVRVYLLGSSASLPEADGSTDNDSFDVVEGQVLMSRLQWDGSSDISPSDSASSKAST
NNSDTRKPKKKKPSHVSLASGGGTSKKKKPKPPAPLTPGLYDLN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaagacatgtctctgtgtggcctggataacagcaaactggaggccattgct
catgaaatatacacagacctgatagaggacacatgtctggggctcagctttgaggtccat
cgtgctgctaaatgtggatatttcttgctggacgaaacggacccggacagtgtaaaggat
tttgaaataatagaccagccgggggtggatatcttcggtcaggtttacaaccagtggaaa
agcaaagaatgcgtgtgtcctaactgtaaccgtagtatcgctgcatccaggtttgcccct
cacctcgagaagtgtctgggtatgggccggaacagcagccgcatcgctaaccgcagaatc
gcaagcagtaacaacatgaacaagtcggagagtgaccaggaagataacgacgatgttaat
gataacgattggtcctatggatcggagaagaaaggtgcgtttaatgcgtctggagcaaag
aagagaaaagcagagaagaacccaaattctcctcgcagatcaaagtccctaaaacacaaa
aacggagatctctctgttaactctgacccgtttaagtataatagcagttcagggattagt
tatgagaaccttggcccagatgagcttcaaacacttctaaccacgcaatgtggggttata
tcggagcacactaagaagatgtgtaccagatcacatcgttgcccccagcacaccgatgac
cagcgccgatcagtgagggtctatttgctgggctcctctgcctctcttcccgaggctgac
ggcagtacggacaacgacagcttcgatgtggtggagggacaggtgctgatgagtcggctt
caatgggacggatcctcggacatttctccttctgattctgcgtcctccaaagccagtaca
aataactcggacactcgcaaacctaagaaaaagaagccaagtcacgtcagcctggcgagt
ggaggcggcacaagcaagaagaagaaaccgaaacctcctgcccctctgaccccggggttg
tacgacctcaattga
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