Xenopus laevis (African clawed frog): 108702540
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Entry
108702540 CDS
T01010
Symbol
hdac5.S
Name
(RefSeq) histone deacetylase 5 isoform X2
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108702540 (hdac5.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108702540 (hdac5.S)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108702540 (hdac5.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108702540 (hdac5.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
MAM33
Motif
Other DBs
NCBI-GeneID:
108702540
NCBI-ProteinID:
XP_018093559
Xenbase:
XB-GENE-17345861
UniProt:
A0A8J0TYW5
LinkDB
All DBs
Position
9_10S:4923643..4953327
Genome browser
AA seq
1016 aa
AA seq
DB search
MSLPTQTMEASPLLSAAVPTPSSLSPTSGEQRVEPRSGSGPGGIVDPMSREQQLQQQLLL
LKQQQQLQKQLLFAEFQKQHESLTRQHEVQLQKHLKQQQEIMAAKRQQELEQQRKRERQR
QEEAEKQRLEQQLLILRNKEKSKESAIASTEVKLKLQEFLLSKSKEVPGNVNHSILQHPK
CWGTHHTSLDHSSPPQAGSPATLSSYKVSLLATCDGRDDFPLRKTASEPNLKVRSRLKQK
VAERRSSPLLRRKDGTVISAFKKRAIEIQVSSVCNSAPGSGPSSPNSSNSAICENGMTGS
VPNIASEMLPQQRVLTLEGVGGPLGLYTSPSLPNICLHGSTSSLTGQFTPQEGTEHQSLR
PGGPFINTSPLPALDGGEIGNLTAPSLLQHVLLLEQARQQSALITVPLHGQSPLVGGERV
SGSLRSLTKVTRHRPLSRTQSSPLPQSPQALQQLVLQHQHYLDQQHLNKASEAIHQPPTH
PEETEEELTEQDGGEKCSVIFTLDGGTESEETQEEDDGEEEDKDIEDRRTNGVEHALKKL
FPDALPLYQGSLSHTALSRTQSSPAAPLSTCSSEPHHRVISTTGLVYDTLMLKHQCTCGD
TNNHPEHAGRIQSVWSRLQETGLLGKCQRVRGRKATLDEIQTVHTEHHTLLYGTSPQSRH
KLDSKNILGTLSQKLYAVLPCGGIGVDSDTVWNELHSPPAVRTAVGCLLELVYKVASEEL
KNGFAVIRPPGHHAEESVAMGFCFFNSVAIAAKLLRQKMNMGRILIVDWDIHHGNGTQQA
FYNDPNVLYISLHRYDDGNFFPGSGSPDEVGADHGIGFNVNIAWTGGVDPPVGDAEYLAA
FRMVVMPIAQEFSPDFVLVSAGFDAVEGHQSPLGGYSVTAKCFGHLTKQLMTLAGGQVVL
ALEGGHDLTAICDASEACVSALLGLELAPFDNSVLQQRPSDNAVATLERVINIHSKHWSC
LKSSTIGCSILEVQRVEMEEAEAVSALASLSVDTDQCNSNSNPRPLEEPMEDEPVA
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcccacccagaccatggaggcctctcctctcctttctgcagccgtacccact
cccagcagcctatcgcctacttcaggagagcagagggtggagccgaggtcaggcagtggc
cctggggggatcgtggaccccatgagtcgagaacaacagctccagcagcagcttcttctc
ttaaaacaacaacagcaactccaaaagcagcttctatttgccgagttccagaagcagcac
gaaagcctgaccaggcagcatgaggtccaattacagaaacaccttaagcaacaacaggag
attatggcggccaagagacagcaagagttggaacagcagagaaagcgcgaacgacagagg
caggaggaggctgagaaacagaggctggagcagcagcttctgatcctgaggaacaaggag
aagagcaaagaaagtgctattgccagcacagaggtgaagctaaagttacaggaattcttg
ctcagtaaatccaaggaggtacctggaaatgtgaaccattccatcctgcaacaccccaag
tgctggggcacgcaccatacctcactggatcatagttcccctcctcaggctgggtcacca
gcaactctctcatcttataaggtgtccctcctcgcaacctgcgatgggcgtgatgacttt
cctctccgcaaaactgcctctgaacctaatcttaaagtccgttcccgattaaagcagaaa
gttgcagagcgtcgcagtagtcctcttctccgaaggaaggatgggactgttatcagtgct
ttcaagaaaagagccattgaaatccaggtgtcttcagtgtgcaatagtgccccaggatct
gggccgagctccccaaacagctccaacagtgccatatgtgagaacggaatgactggcagc
gtgcctaatattgccagcgagatgcttcctcagcagagagttctgactcttgaaggagtg
ggtggacctcttgggctgtatacttctccatcactgcccaacatctgcctgcatggaagc
accagcagcctcactggtcagttcactcctcaggaagggacagagcatcagagtttgcgc
ccaggtggtcccttcatcaacacctctccactgcctgctctggatgggggtgagataggc
aacctgacggcaccttcactcctgcagcatgtactcttactagagcaggccagacagcag
agtgctctcataacagtccccctgcatggtcagtccccattagtagggggagaaagagtc
tctggttccctacgttctctcaccaaagtcacaaggcatcgtcccctgagtcgtacacag
tcctctcctctcccacaaagtcctcaggcccttcagcaactggttctgcaacaccagcac
tacttggaccagcaacacctcaacaaggccagtgaggccattcaccagccacctacccac
ccagaagagacagaagaggagctaacagagcaggacgggggtgaaaagtgttctgtgatt
ttcactcttgatgggggcacagaaagtgaagaaacacaggaggaagatgatggagaggaa
gaggataaagacatagaagacagaaggaccaatggcgttgagcatgcactgaaaaagctc
ttcccagatgcccttcctctttaccagggttcactctctcacacggctctgagtcgcact
cagtcctccccagcggctcctctatcaacctgcagttcagaaccgcaccacagagtgatc
agcacaactggtttagtctatgataccctcatgctgaaacaccagtgcacgtgtggagat
accaacaaccacccagagcatgctgggagaatccaaagtgtctggtcccgtctgcaggag
actggcctgttgggaaaatgtcagcgtgtccgaggcaggaaggccacattggatgagatc
cagaccgttcacacggagcatcacaccttgctttatgggaccagccctcagagtcgccac
aaattggacagcaagaacattctagggactctatcccagaagctgtatgctgtcctgcct
tgtggagggattggggtggacagtgacactgtgtggaatgagctgcactcacctccagct
gtgagaacggcagtgggatgtctgcttgagttagtctataaagtagcctctgaagagctg
aagaatggttttgcagtaataagaccgcctggacaccatgctgaggaatcggttgccatg
ggcttctgtttttttaactctgtagctatagcagccaagttgctccgtcagaagatgaac
atgggccgaatcctcatagtggactgggacattcaccatggcaatggcacacaacaggcc
ttctacaatgacccaaatgtcctctatatttctctccaccgttatgatgatggcaacttt
tttcctggtagcggctctccggatgaggtgggtgctgaccatggtattgggttcaacgtt
aacatagcatggacgggtggcgtggatcccccagtgggggatgctgagtaccttgctgca
ttcaggatggtggtcatgcctatagcccaggagttctctccggattttgttcttgtttct
gctggctttgatgcagttgagggtcaccagtctccactagggggatactcagtaacagcc
aaatgctttggacaccttaccaagcagttaatgactctggctggcggccaagtggtcctg
gcattggagggaggtcatgatctgacagccatttgtgatgcctcagaggcttgtgtttct
gcccttctgggtttggagcttgcaccttttgataacagtgtcctacaacagagacccagt
gacaatgcagtagcaaccttggagagagtcatcaacatccatagcaaacactggagctgc
ctaaagagctcgactataggctgctccatcctggaggtgcagcgtgtggaaatggaggaa
gcagaagccgtcagtgcacttgcatcattatcagtggatacagaccagtgcaactccaac
tctaatcccagaccattagaagagcccatggaagatgaaccagtggcctga
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