Xenopus laevis (African clawed frog): 108702623
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Entry
108702623 CDS
T01010
Symbol
taf4.S
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108702623 (taf4.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
108702623 (taf4.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108702623 (taf4.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108702623 (taf4.S)
Coactivators
SAGA/TFTC/STAGA complex
108702623 (taf4.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108702623 (taf4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
108702623
NCBI-ProteinID:
XP_018093707
Xenbase:
XB-GENE-17340162
UniProt:
A0A8J0TZ78
LinkDB
All DBs
Position
9_10S:13691432..13723810
Genome browser
AA seq
1009 aa
AA seq
DB search
MAAGSDLLDEVFFNTDVDDKVVSELVGSLESQLAAAAHQHHHHHHQHQPPAEARSQALAN
HVTSPGAGVASAGGQPEAKIGLSPELPKTGAAVPGVQGGVINSRSQTTAQPDGTQSAIPE
APGALTQAKAGVLGNMASALPNHSSGNGKNATLQTMNGSNVVINSHGPGVHGTPYQGNSN
PAVNIVNNGPAPVTKGGVNPGANTVIQTSFLGTTNVASSVISSSSTSTAGAAGQQVGMAG
VPTSVALVRPLVHQATQNGSNTVINSPLSTPAGVSLQMNSQPSPAIKSESPKTIIQPPQQ
SQPNPGNMVLAQTMQAGGAVSAPATPTVMGKTTVSAVPPNLPRTPTAPAGGIRATITPPM
LAPRLPQPQQNPASVQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAQAQAQAQAQAQ
AQAQAQAQSQSQNTMVPRPATPTSAPPVQISAVQSPGAPLLTRQVTPTIIKQVTQTPTTV
QPTTTLQRPPVVQTGTPQRPVQGAATPAAATTETMENVKKCKNFLSTLIKLASSGKQSTE
TAANVKELVHNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDAAAFI
QQSQQQQPHTQPTTALTAVMLSSPVQRTAGKTTATVTNTLQQPVISLTQTAQSKPGQPTP
LVIQQAHKAGAVVRPPHVTLTQTPMVALRQPPNRIMLTTQQLQLNPLQTGAVQTVPVAKQ
ALLHGAKTMSVISAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATN
SELVGTLTRSCKDETFLLPALLQRRILEIGKKHGITEIHQDVVSYVSHATQQRLQNIVEK
ISETAQQKNISHKDDDRYEQTSDVRTQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQ
EDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVESPGPGSGSESSSTST
ATASSSAGGSSRQFTRQRITRVNLRDLILCLESERETSHSLLLYKAFLK
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggttcggatctgctggatgaggttttcttcaacacggacgtggacgataaa
gtggtcagcgaactggtgggatccctcgagtctcagctggccgctgcggcccaccagcac
catcatcatcaccaccagcatcagccccccgccgaggcccgcagccaggccctggctaac
catgtcaccagcccgggggcaggggtagccagtgcggggggccagcctgaggccaagata
gggctctccccggagctgcctaaaacgggagccgctgtacctggagttcaaggaggtgtc
attaacagccgatcacaaaccacagcacagcctgacgggactcagtctgctatacctgaa
gcaccaggagctcttacccaggctaaagctggggttctgggcaacatggcatccgctctt
cccaatcacagttcaggaaatggtaaaaatgccaccctacagaccatgaatgggagtaat
gttgtgattaattcgcacggacctggggttcatggaaccccgtaccaggggaacagcaat
cctgctgtcaacatagtgaacaatgggccggctcctgtcactaagggtggagtgaaccca
ggagccaacaccgttatccagacttcttttcttgggactactaatgtggcgtcctctgtc
atctcttcctcatccacgtcgactgcaggagcagctgggcaacaagttggcatggcaggt
gtacccacgagcgtagcattggtgaggcctctggtgcaccaggccacacagaacgggagc
aatactgtgatcaattcccctctgtctaccccagctggggtatcgctgcaaatgaacagt
cagcccagtcccgcaatcaagtcggaatcccctaaaactattatccagccccctcagcag
agccagcctaaccctggcaatatggtgttagcacagactatgcaagctggaggagctgtg
tctgcccctgctacacctacagtaatgggcaaaactacagtcagtgccgtgcctcccaac
ttgccaaggactcctacagcaccggctggtggcatcagggctacaatcactccccctatg
cttgccccgcgcttgccacagcctcagcagaacccagcgagcgttcagaatttccagctt
ccgcccggaatggtccttgtaaggagcgagaatggccagcttttaatgatcccccagcaa
gccttggcccagatgcaagcccaagctcaagcccaagcccaagctcaagcccaagctcaa
gctcaagcccaagcacaagcccagtcgcaatctcagaacaccatggttccccgtcctgcc
actccaaccagtgcccctcctgtacagatttctgcagtgcagtctcctggagccccgctc
ttaaccagacaggtcacaccaaccatcatcaagcaagtaactcaaacgccaacaactgtg
cagcccaccacaacactacagcgccctcctgttgtacagactgggacacctcagagacct
gtgcaaggagctgctacccctgctgcagccaccacggaaaccatggaaaatgtgaagaaa
tgcaagaattttttatccacgctaattaagttggcttcatcgggtaaacagtccactgag
accgcagctaatgtgaaagaactagtgcacaacctcctggatgggaaaattgaagcagag
gatttcacgagtagactgtacagagaactgaattcttcacctcaaccttaccttgtgcct
ttcctgaagaggagcctccctgccttgcgccagttaacgccagatgctgcagccttcatc
cagcagagtcagcagcagcagccccacacgcagcccacgactgccctcactgcagtgatg
ctgagtagtcctgtgcagcgaaccgctggcaagactaccgctactgtcactaatacattg
caacagccagtcataagcctcacacaaaccgcacagtccaagccggggcagcccacccca
ctggtcattcagcaggcacataaggcgggagcagtggtacgtcccccacatgtgacatta
actcagacgcccatggtagcacttaggcagcctccaaatcggatcatgctcaccacacag
cagctgcagttaaacccactacaaacaggtgcggtacaaacagttccagtggcgaagcaa
gccttgttacacggagcaaaaacaatgtctgtaatatccgcacaggctgcggcagcacag
aaaaataaattaaaagagccggggggaggatcgttcagagatgacgatgatattaatgat
gtagcttccatggccggggtgaacctctctgaagaaagtgcaaggatattggcgacgaat
tcggagttagtgggaacgttaacgcggtcctgcaaagacgagacgtttctgctgcctgca
ctgctacagaggagaatattggaaataggtaaaaagcacggaatcacagaaatccatcag
gacgttgtcagttatgtttcccacgcaacacaacagcggctacaaaacattgtagaaaaa
atctcggaaacagcgcagcaaaagaatatttcgcacaaggacgatgataggtatgaacaa
acaagcgacgtacggacgcagctcaaattcttcgagcagcttgatcagattgaaaagcag
aggaaagatgagcaggagcgagagattctcatgcgggcagctaagtctcggtcaaggcaa
gaggatccggaacaattacggctaaaacagaaggcaaaagagatgcaacagcaggaactg
gcacaaatgaggcagagggacgccaacttaacagcgctagcagctatcggccctcgaaag
aagaggaaagttgagtcaccgggccctggttctggttcagagtcatccagcacaagtaca
gccacggccagcagttctgcgggagggagcagccgacagtttacaagacaaaggataacg
cgagtcaatctcagggacctcatattatgtttggagagtgagcgagagacaagccattca
ctattgctatacaaagcattccttaagtga
DBGET
integrated database retrieval system
