Xenopus laevis (African clawed frog): 108702726
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Entry
108702726 CDS
T01010
Symbol
nbr1.S
Name
(RefSeq) next to BRCA1 gene 1 protein isoform X1
KO
K17987
next to BRCA1 gene 1 protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04137
Mitophagy - animal
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108702726 (nbr1.S)
04137 Mitophagy - animal
108702726 (nbr1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108702726 (nbr1.S)
03029 Mitochondrial biogenesis [BR:
xla03029
]
108702726 (nbr1.S)
Membrane trafficking [BR:
xla04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
108702726 (nbr1.S)
Pexophagy
Other pexophagy associated proteins
108702726 (nbr1.S)
Aggrephagy
Cargo receptors
108702726 (nbr1.S)
Xenophagy
108702726 (nbr1.S)
Other autophagy associated proteins
Midbophagy
108702726 (nbr1.S)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
108702726 (nbr1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_BRCA1_IG
PB1
UBA_NBR1_C
ZZ
Motif
Other DBs
NCBI-GeneID:
108702726
NCBI-ProteinID:
XP_018093852
Xenbase:
XB-GENE-17337756
UniProt:
A0A8J0U0Q4
LinkDB
All DBs
Position
9_10S:30944462..30979195
Genome browser
AA seq
979 aa
AA seq
DB search
MESQVNLFVSCNGESQNFLVSNSENTTWADVETMVLVSYDLNYIQIKYIDEDNEEVSVNS
QGEYEEALKSAVKQGGLLRINVYDKQQPSKSEEPAHFAELNKPLETKSCPAVRTGKRPLE
HYSLLAGTVEQDIKRAHLSSNIMSAVNPGGLLKMNAYDKQQPNKSEEPASFEELNKPLEP
KSSPAVANGKRPLGHYSILARTVGQDMQRAQTSSSAAEQLAPAETKESTVIPPDWFASYM
EKFKEQIILETVERVTLSLRENSMTNASCYSLPVKDPVRPAFLENLFDWHLLCSNCKQKI
IGIRYQCSTCVSFNICEQCEGEGCDHDHSHLYLKMRRPVEAPKEQFRIPMQPCPQIIPTV
SAIFVDENLPDGTHLKPGTKFIKHWRMKNTGNVKWSLDTKLKFMWGNLTLASTSCKEAPV
PSLLPNEVGVLSIEFIAPALEETYTSHWRLSHKGKHFGPRVWCSIIVDTIACNDILDHTE
KGLSSRGINQQEDATTGSTQNGDSLVQDLARPPTPETIRNTNGDRKLNFPSVDLLTAQVK
HCPCLVQLGAKDLLSFELLDINIVQELERVPHNTPVDMTPCISPLTHDGPLIENAGLGRT
LEESEMALQKTHNGLSKSPENRENAAAQDEEDISGTQFVCETVIRSLTLDAAPDYNLPQR
KTSPHSSLPSMPHTSCDYSVKHEKSLGQNSSALNFSEPVEHKNVDVGNQQKILPTDLCPA
DLYEDDQNMKEDANDETGSQGSCDSMEDYIIILPECFDTSRPLEESMYNSALSETGCDTE
TKTEAKGDEANSHQSQSHSINDILTISQTLDTVPLIPEVMRPSPQTRAPQEIPGAAVSRT
TEAEPASIRQSIPEQRNQDSSYENAPKLETTACTPASSEQTDHTRQFTSVSIAGGLVKGA
LSVAASACKALFSGQQETTLQQPRNSEEQERAMMAILLEMGFCDQQLNQRLLCKHSYNLM
DVVTELVQINDNDWYSARY
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaggtgaatttgtttgtgagctgtaatggagaatcccaaaactttctggta
tctaactctgaaaatacaacttgggctgatgtagagacaatggtgttagtctcttatgat
ctgaactacatccagataaagtacatagatgaggataacgaagaggtgtctgtgaacagt
caaggggaatatgaagaagcgttaaagagtgcagtgaagcagggaggacttctgcgaatt
aatgtctatgacaagcaacagcctagcaagagtgaagagcctgcacattttgcagaattg
aataaaccattggagaccaaaagctgtcctgctgtcagaactggaaagagaccactggag
cattattccttgctggcagggacagtggagcaagatattaagagggcacacctttccagc
aatataatgagtgcagttaatccaggaggacttctgaaaatgaatgcctatgacaagcaa
cagcctaacaagagcgaagagcctgcaagttttgaagaacttaataaacccctggagcca
aaaagctctcctgctgtcgcaaatggaaagagaccattggggcattattccattcttgca
aggacagtggggcaagacatgcaaagggcacaaacttccagtagtgcagcggagcagctc
gcaccagctgagaccaaggaatcaactgtaatcccaccagactggtttgccagctatatg
gaaaaatttaaggaacaaatcatacttgaaacagtggaaagggtgaccctgtctctaaga
gagaactcgatgaccaacgccagctgctattcattgccagttaaagatccagtaaggcct
gcttttcttgagaacttgtttgactggcatcttctctgcagcaattgtaaacaaaagata
attggaatacgctatcagtgcagcacctgtgtatcctttaacatctgtgagcaatgtgaa
ggtgaaggctgcgaccatgaccacagccacctatacttaaaaatgcggagaccagtagag
gcccctaaagaacaattcagaattcctatgcaaccatgcccacagatcattcccactgtc
agtgccatctttgtggatgaaaacttacctgatggaacgcatcttaagcctggtactaag
tttatcaaacactggaggatgaagaacactgggaatgttaagtggagtttagatactaag
ctaaagttcatgtggggaaacctgacgttagcatccacttcatgcaaagaagctccagtc
ccttccctgctaccaaatgaggtgggagttttgtctatagaatttattgcccctgcgttg
gaggagacctacacctcccactggcgcctgtcacataaaggaaaacattttggacctcga
gtttggtgtagcatcattgtggataccattgcgtgtaatgacatcctagaccatacagag
aaaggcctatcttccagggggattaaccaacaagaggatgctacaactggatctactcag
aatggagactctctggtccaagatttggccaggccccccactcctgagacaataaggaat
acaaacggtgacagaaagctgaactttccatctgtggatcttcttactgctcaggtgaaa
cactgtccctgtttggtgcagttgggggcaaaggacttgctctcatttgagttgctggat
ataaacattgtccaagaactggaacgtgtccctcataatactcctgttgatatgactccc
tgcatatcacctctgactcacgatggaccattaattgaaaatgcaggtttggggcgaaca
ttggaagaaagtgaaatggctttgcaaaagacacataatggactaagtaagtctcctgaa
aacagagagaatgcagcagcacaggatgaagaagacatcagcggaacacagtttgtgtgt
gaaacagtgataaggagtctgacgttagatgcagccccagattacaatctgcctcaaagg
aagacctcaccccacagttcactaccgtctatgccacacacaagttgtgactacagtgta
aagcatgaaaaaagtttgggacagaattcttctgcactcaatttctcagaacctgtagaa
cacaagaatgtggatgttgggaaccaacagaagatacttcctacagatctatgtccagct
gatttatatgaagatgatcaaaacatgaaggaagatgctaacgatgaaacaggcagccag
ggatcatgtgattctatggaggattatatcattatccttcctgagtgttttgacacatcg
cgcccattagaagaatccatgtacaattcagcactttctgagacgggatgcgacacggaa
acaaagacagaggcaaagggagatgaagccaatagtcatcagtcccagagtcacagcatc
aacgacattctcacaatatcacagaccttagatactgtcccgcttatcccagaagtgatg
agaccctcacctcaaacaagggcaccacaggagataccaggagctgctgtatctaggaca
acagaagctgagcctgcaagcatccggcaatctattccagagcaaaggaaccaagattct
tcatatgaaaatgccccaaagttagaaactacagcttgtactccagcatccagtgaacag
actgatcacacaagacagttcaccagtgtcagcattgcaggaggtcttgtgaaaggggct
ctatctgttgctgcttctgcttgtaaggctttattctctggacaacaggagacaactctg
cagcagccaagaaattcagaagaacaagaaagagccatgatggctatcctcttggagatg
ggattctgtgaccagcagctcaaccaacgcctgctatgtaaacacagctacaacctcatg
gacgtagtgaccgaattggtccagatcaatgacaacgattggtactctgctcgttactga
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integrated database retrieval system
