Xenopus laevis (African clawed frog): 108702771
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Entry
108702771 CDS
T01010
Symbol
rbl1.S
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04110
Cell cycle
xla04218
Cellular senescence
xla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108702771 (rbl1.S)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108702771 (rbl1.S)
04218 Cellular senescence
108702771 (rbl1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108702771 (rbl1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
108702771 (rbl1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
108702771
NCBI-ProteinID:
XP_018093927
Xenbase:
XB-GENE-17332001
UniProt:
A0A8J0TZQ0
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Position
9_10S:complement(37012585..37044189)
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AA seq
1082 aa
AA seq
DB search
MSLKTTSPKMQRGDYSLPGIMCTPAGALDDRIALPAPRINYEGSPCTQGPGLDPLNAGRD
RIEKPTWKWRKDTQGEVKHWLACALYAACRKGVIPTVGKGIMEGNGVSLTRILRSAKLSL
IQFFNKMKKWIDMSNLPQEFRQRVEHLERNFEVATVIFKKFEPIFREIFQNPHEEPPRLP
RSRKQRRLQCCVKDLFSFCWTLFVYSKGTGGSEGQCNVVVKDQAEGNFCLIGDDLVNSYH
LLLCCLDLIYAHVLQCPNKEDLLNPSFTAKLPPIDSSSEDTPCIIGALCELYDGISVEAK
GIKEHYFKPYIAKLYDKKILKGSCLLDVSCFTDNNKSLNKEYEEYVLTKGDFDERVFQGV
DAEEEIGSPRKFVVEFPTGNCTPRKQMECNLQQHFEKKSSFAPSTPLTGRGYLKEEPTVI
TPVSSATQCVSRLQSMVTGLRNAPSEQLIDVFKSCVRNPLENVLNIVRDIGRLFCLHYTT
STEDQPGSHIDFAINRWKLAEILYFKVLETIVVQESRRLYGKDLTALLEQGIFHQSLIAC
CLEIVLFAYTSPKTFPWTIEVIKLSSFYFYKVIEVFIRSEDGLSRDMVKHLNTIEEQILE
SRAWTSDSVLWVHLDAVDDVPSCEEVIIPSNFESENEAGLGHLPMMPASPIVHRRLKEVR
TGLCGSYRQDCQPLSPISVHDRYSSPAAGSAKRRLFGDDCPREPAADKITTPDITSIRIA
ISQSSDRTAQPIGQTIAIPVQGVANETGKSLCVTMKTYPSQSENSFPVPLTAQALISPLT
KRPLGRSQESCPTSACKPKKTGSLALFFRKVYHLASVRLRDLCLKLDVSNDLRRKIWTLF
VYSVVHCTDLMKDRHLDQLLLCAVYIMAKISKEERLFHDIMKCYRNQPQANSHVYRSVLL
KRLPQAIGDETSQDVEMTASNSNDSHPTPSGFTGSPCGQAERGDLITFYNNVYVGRVRLF
ALKFAGCTQDHLVDAPPLSPFPSIKQQAISPRRVSQQHSIYVSPHKNSGNLTPHAALLYK
FSGSPSKSLQDINSMLKQEQRGRKRIIAIDSDTESPAKRLCQENDDALLKRLQDVVSERA
NH
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgaaaactacaagccccaaaatgcaacgcggagactattcgcttcccgggata
atgtgtacacccgccggggctctcgatgaccgaatcgctttacccgccccacgaattaat
tatgagggttctccgtgtacacagggtcccggtttggaccctctcaatgcgggaagagac
aggattgaaaagccgacatggaaatggcggaaggatacacagggagaagtgaagcattgg
ttagcatgtgccttgtatgcagcatgtcgaaaaggcgtcattccaactgttgggaaagga
atcatggagggtaatggcgtgtcgctgacgcggatactgcgctctgcaaaactaagcttg
attcagttcttcaataaaatgaagaagtggatagatatgtctaaccttccgcaggagttc
cgacagcgagtggagcacttggaaaggaactttgaagtggccaccgttatatttaagaaa
tttgaaccgatctttcgggagatatttcaaaacccccacgaggagccaccaagattacca
aggagcagaaagcaaaggaggctgcagtgctgtgttaaagatctcttcagtttctgctgg
accttatttgtttactccaagggtacagggggatctgaaggccaatgtaatgtggtggta
aaagaccaggcagagggtaatttctgcttgattggagatgatttggttaattcttatcac
ttgcttttatgctgcttggaccttatttatgcgcacgtgctacagtgccctaataaagaa
gatctgctaaatccttcctttacagcaaagcttcctcctattgactccagctcagaggat
accccatgcatcattggtgcactgtgtgagctatacgatggaatatctgtggaagccaag
gggataaaagaacattattttaagccatatatagcaaaactttatgataaaaagatttta
aaaggatcctgtctattggatgtctcttgtttcacagataacaataaatccttgaataaa
gagtatgaagagtatgtccttacgaagggagactttgatgagcgggtttttcagggtgtc
gatgcagaagaggagattggaagtcccagaaaatttgttgtggaatttcccacgggaaac
tgcactccacggaagcaaatggagtgcaacctgcagcaacattttgaaaagaaaagttct
tttgctccatctactcctctgactggtaggggttacctgaaggaggagccaactgtaatc
acacctgtttcatccgcaacacagtgtgtcagcaggttacagagcatggtgacaggactc
agaaatgctccaagtgagcagctgattgacgttttcaagtcatgtgttcgaaacccatta
gagaatgtattgaatattgtccgagatattggacgtctattttgccttcactatacaacg
tccacagaagaccagcctgggtctcatattgattttgcaatcaatcggtggaaactggct
gaaattttgtactttaaagtactagagaccatcgttgtacaggaaagcaggagactttat
gggaaagatttgacggctctgctagagcaaggcatctttcaccagtcactgattgcctgc
tgtctggaaattgtcctatttgcttacacttctcccaagaccttcccgtggaccattgaa
gtaattaaactgagttctttctacttctacaaggtaatagaagtgtttattcgctctgaa
gatgggctatcacgcgatatggtaaaacacctcaataccattgaagaacaaattttggag
agccgtgcctggaccagtgattctgttctctgggttcatcttgacgctgttgatgatgtg
ccaagctgtgaagaggtcatcatacccagcaactttgaatctgagaatgaggctgggctt
ggccacttgcccatgatgcctgcatctcccattgttcatcgtcgtttgaaagaagttcga
actggcctatgtggatcatataggcaagactgccagccactctccccgatttctgttcat
gaccgatacagttcaccagctgctggtagtgccaagaggaggctctttggtgatgactgt
ccaagggagccagctgctgacaaaataaccacacctgatatcaccagcataaggattgca
ataagccagtcttctgatagaactgcccagcctattggacaaaccattgctatacctgtt
caaggtgtggcgaatgaaactggcaaaagcctttgcgttacaatgaaaacgtatccatca
caaagtgaaaattcttttccagtgcctttaactgcacaagccctgatcagtccacttaca
aagcgtccgttgggcagatctcaggaaagctgtcccacttcagcatgcaagcccaagaaa
acgggctctctggctttgttcttcagaaaggtctatcacttggccagcgtccgtctccgt
gacttgtgcctaaagctggatgtgtccaatgatttgcggcgaaagatctggaccttgttt
gtgtattcggttgtccattgcacagacctgatgaaagacagacacttggatcagctcctc
ctctgtgctgtgtacattatggccaaaatcagtaaagaagagaggttgtttcacgacatc
atgaaatgttatcgcaaccagccccaggcaaacagccacgtttatagaagtgtattattg
aagaggttacctcaagcaattggagatgaaacaagtcaggatgtagagatgacggcaagc
aattccaatgactctcatccaacccccagcggttttactggcagcccctgtggccaagca
gagcgaggagatctcattacgttttacaacaatgtctatgtaggacgcgtgagattattt
gcactaaagtttgccggctgcactcaagaccatctggtggatgctcctcctctttcccca
tttcccagcatcaagcaacaagctatttctccccgccgagtatcccagcaacattctatt
tatgtctctccccataagaacagcggcaacctgactccccacgcagccctcctgtacaag
tttagtggaagtccttcaaaaagcttgcaggacataaacagcatgctgaaacaggagcag
aggggtcggaagcgaatcattgctatagacagcgacacagagtctccagcaaagcggctt
tgccaggaaaatgacgacgctctgctgaaacgcctgcaggatgttgtgagcgagagggcc
aaccattag
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