Xenopus laevis (African clawed frog): 108702772
Help
Entry
108702772 CDS
T01010
Symbol
chd6.S
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108702772 (chd6.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108702772 (chd6.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
CHDCT2
Chromo_MIT1
MUN
Motif
Other DBs
NCBI-GeneID:
108702772
NCBI-ProteinID:
XP_018093933
Xenbase:
XB-GENE-6488559
UniProt:
A0A1L8EMP1
A0A974BTP4
LinkDB
All DBs
Position
9_10S:complement(37054335..37132146)
Genome browser
AA seq
2682 aa
AA seq
DB search
MIMKIQKQDQQQLPSLKALSYSPMSSASIPCEHPILPSFSESTPQDFHTVTLLDTTCPLL
DDNDLYPDSGQEDSLPVQVTSINGMENSGGLGTGVKKKRKKKEPGEEKETKPKKKKEPKK
VKEPKKVKEPSEAKDPKDQKQPKAPKEPKKPRKPREPKPPKEKKANQDSAAKTKPKKASK
EQGPTPVEKKKKGKRKTEFSEESLDGESSLPNPASQSTEESVESLDSQKRRSGRQVKRRK
YNEDLDFKVVDDDGETIAVLGAGRASALSASTLAWQAEEPPEDDANIIERILSSRISQKE
FMHGGMPVEVEEFYVKYRNFSYLHCKWATMEELEKDPRIQQKIKRFRNKQAQMKHIFTEP
DEDMFNPDYVEVDRVLEVAHTKDSDTEEEVTHFLVKWCSLSYEESTWELEEDVDPVKVKE
FEALQKIPDLTPMERPASETWQKLVNSRTYKNNNQLREYQLEGMNWLLFNWYNRKNCILA
DEMGLGKTIQSITFLSEIFFMGIRGPFLIIAPLSTITNWEREFRTWTEINTVVYHGSQIS
RQMIHQYEMHYRDEQGTPIPGIYKFHVVITTFEMILADCPELKKIRWSCVIIDEAHRLKN
RNCKLLEGLKLMALEHKVLLTGTPLQNSVEELYSLLNFLEPVQFPSESTFLEEFGDLKTE
EQVKKLQSILKPMMLRRLKDDVEKDLAPKQETIIEVELTNIQKKYYRAILEKNFTFLTKG
ANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKRHSPDALDFQLQAMIQAAGKL
VLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRF
CKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY
RLITRNSYEREMFDKASLKLGLDKAVLQDINRKGNTNGVQPLSKIEVEDLLRKGAYGALM
DEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSSGNRTDISLDDPNFWQK
WAKIAELDTDARNEKESLVIDRPRVRKQTKHYNSFEDDELMEFSELESDTEERPTRSRRL
NDKTRRYLRAECFRVEKNLLIFGWGRWKDILNLGRFKWHLNEKDMEMICRALLVYCVKHY
KGDEKIKSFIWDLITPMKDGYNQALQNHSGLSAPVPRGRKGKKLKNQMLLPEIKNADWLA
SCNPEIVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGDAASKILEGENARDLEVLLP
DIDYVEIPVDWWDADADKSLLLGVYKHGYERYFAMRADPALCFLEKVGMPDETSLTVDGV
NDVTPESGDRSALKEETKEEIVNTQQEQDTNDSTGKEEKRDEESNIAENLQAQDSPEPDK
LCWPAASILTARLRRLITVYQRCNRRDLARPEVLVPTNHSYWLQEEMARRAEMDPIMKEM
QKRWTRREQADFYRTVSSFGVIYDPEKKCFDWSQFRALSRLDKKTDESLEKYFHSFVAMC
RNVCRLPLRKDDGSADPSLFLDPITEERAARTLYRIELLRKVREQVLRHPQLHERLKLCR
PSLYLPVWWECGKHDKDLLIGTAKHGLSRTDYYIMNDTQLSFLDAYRNYAQQKSNGGENM
CYHFQMNSKAHEPPSCHLERTCESAKLKPDKEIKIEAEEATITNQTCSPPDLSCENFISQ
VGDMISNNHDECSMSDSLMCMICDEKTCNSALLDTNNSEQRSLTQESFLGLGSKNEPTDY
SLSKTKVDDILPVEESVSRDCFLGSSEKDEPIEGIDRINEPFGDSGCHLGLAAEDCEKAQ
VEAIGQQVLDDDNFCSSLSQTAEQSLGLDLEFLDKTFDDHSALSPSINEDKDCGIAGEHS
ESTHINPLPVQEKEEWGADLQELKEDPIVKWQNELNDMNNPPLDDTLKDQEVEDLSIEKD
SLTSKSSYCVPSLEVNDCAEMKQKNSLMLSGLLKQNAEDLKERIAGENVVEEFKVPLEGN
EKIKLEEGEVKKEVKKENVEEECNCKEDSTNCGRMWMWRSETTDYLDKYTEEDVKACSLS
VPEESHQDFQDGRAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAVLKGKWPSSSQQ
FEAQCMVPSSVLGTCTRSSSYPASEAQNMVYSNGSPVPHAQKEPLSATTFPIEERKQRRP
FEFDSERPDGKHRGMEHLSPTHGRTNSALNGWRDAALELCREQAAGGGSSYSMNTSTPKM
TGISGLQSSLGMDLSGILQAGLIHPVTGQIVNGSIRRDESSLRRRRGRRKNVEGIDLGFL
KDRGMHAGILGLREVPNQQGSGHTESSIPASTRSTVHGAKLHPEKVISNKSLLEWLRQQS
DCTIDMPTYGGSFSEKPKQRRQRCKEPSKPDFNLMAGDDRVPAVNKDTGQQGFLPESKFG
RTLSEPLMHDTMPRRRGRRPRSELLKSVVPDSPSGMGPLFMNGLIAGMDIVGLQNMRNMQ
GIPLTGLVGFPAGFTTVSTNEEVKNTLSMLPMMLPGMAAMPQMFGVGGIINPSISSSVPT
SLGSTIKSGISLPEKATEDKDACPETKQDAAPSEKSVGSFQEKSEPAVTTSSPLAFNPFL
IPGMSPSLLYPSMFLSPGIGMALPGVQTNRLSESGGIDPQRRRRKKTKGDSQTSEQETVP
VTESTENEQLSPRAQNCDTNNEPASEKDQEDSGLKDTLDDTN
NT seq
8049 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagcaagaccagcaacagctgcccagtctgaaagcacttagt
tactcaccaatgtccagtgcctcgataccttgcgaacaccccatcctgccatcattttca
gaatctaccccccaagattttcacacagtgacgcttctagataccacctgtcccctctta
gatgataatgatctatacccggactctgggcaggaagattccttgcccgttcaagtgacc
agcatcaatgggatggagaatagcggaggattggggactggggtaaagaaaaaacgtaaa
aaaaaggagccaggggaggagaaggagactaaaccaaagaaaaagaaggagcccaagaaa
gtcaaagagcccaaaaaggtcaaggagccatctgaggccaaggacccgaaagatcaaaag
cagccgaaggctcccaaggagccgaagaagcctaggaaacctcgggaacctaaaccacct
aaagagaaaaaagccaatcaggactccgctgctaagaccaaacccaagaaagcaagcaaa
gagcagggaccaacaccagtggagaaaaagaaaaagggtaagcggaaaacagagttttct
gaggagagcttggatggagaatcgtctttgccgaacccagcatctcaaagcacagaggag
tcagtggaatctctggacagccagaagcgcagatcagggcgccaggtgaagaggcgaaag
tataatgaagacttggatttcaaagtggtggatgatgatggagaaaccattgctgttttg
ggagctggaagagcttcagcattgtcggcttccactttggcatggcaagcagaggaaccc
cctgaggatgatgccaatataatagaaaggatcctgtcttctagaatctcccaaaaggag
tttatgcacggtggaatgcctgtggaagtggaggaattttatgtaaagtacagaaatttt
tcttacctgcattgtaagtgggcaaccatggaagagctggaaaaggatcctaggatccag
cagaagatcaagcgctttcggaacaaacaggcgcaaatgaagcacatctttactgagcca
gatgaagatatgtttaacccagattatgtggaagtggaccgagtgctggaggtggctcat
acaaaggactctgatacagaagaggaggtaacacatttcctggttaaatggtgttcactg
tcgtatgaagagtccacatgggagctggaggaagatgtcgatccagttaaagtaaaagag
tttgaagcactccaaaagattcctgatctcaccccaatggaacggccggcttctgaaacc
tggcagaaacttgtgaattctcgcacttataaaaacaacaaccagctgagggagtaccag
ctagagggaatgaactggctgctcttcaactggtacaacagaaaaaattgcatcttggct
gatgagatgggtctgggcaaaacaatccagtccatcacctttctctcggaaatcttcttt
atgggcatcaggggtccctttcttattatcgctcctctctccactattaccaactgggag
cgggaattcagaacatggacagagataaacaccgttgtctaccatggtagccagatcagc
cgccagatgatccatcagtatgagatgcactatagggatgaacagggaacacccattcca
ggaatctacaagttccatgttgtgatcaccacatttgagatgattctggcagactgccca
gagctaaagaagattcggtggagctgtgtgatcatagatgaagcacatcgtttgaagaat
agaaattgtaagcttctggagggattaaaactgatggctctggagcacaaggtcctcctc
actggcactccccttcagaattctgtagaggaattgtatagcctgctaaatttcttggag
ccggtgcagttcccatcagaaagcacctttctggaagaatttggagatctcaaaacagag
gaacaggtgaagaagctgcagtctatccttaaaccaatgatgcttcggaggctaaaagat
gatgtagaaaaagacttagctcccaagcaggagactatcattgaggtggaactgaccaac
atccagaagaagtattaccgggccatccttgagaaaaacttcacattcctgaccaaaggg
gccaaccagcacaacatgcccaaccttatcaacaccatgatggagctgcgtaaatgctgc
aaccatccatatctaataaatggtgcagaggagaagattctggaggatttccgcaagcgg
cacagcccagacgcacttgatttccaactccaggccatgatccaagctgctggaaaactg
gtgctcatagataaacttcttcccaaactcatcgctggtgggcataaagttctaattttc
tcccaaatggtgcgctgccttgacatcctggaagactatcttattcagaggagatataca
tatgagcgaattgatggcagagtccggggtaatctccgccaggcagctatcgatcgattc
tgcaagccagattcagaccgctttgtgttcctgctgtgcacaagagctggaggtttggga
attaacttgactgctgctgacacctgcattatctttgactctgactggaacccacagaac
gacctgcaggcacaagctcgctgccatcgcattggccagagcaaagctgtgaaagtgtat
cgtctcataaccagaaattcatatgagcgggagatgttcgacaaagcaagcttaaagctg
ggcctggacaaagctgtactgcaggacatcaacaggaagggcaacactaatggggtgcag
cccctctcaaaaattgaggtggaagaccttctgagaaaaggtgcctatggggctctgatg
gatgaagaggatgaaggttctaaattctgcgaggaagacatagatcagatcctacagcgc
agaacacagaccatcactattcagtctgaagggaagggctctacatttgccaaggccagc
tttgtgtcttcaggcaacagaacagacatctctttggatgaccccaacttctggcaaaaa
tgggcaaaaattgcagagctggacacagatgctaggaatgagaaggaaagccttgtgatt
gatcgaccccgtgtcaggaagcaaaccaagcactacaactcctttgaggatgatgaactg
atggaattttcagaactggaaagtgatacagaggagagaccaacaagatcccggaggctg
aatgacaaaacaaggcgctacctccgggctgagtgcttcagagtggagaaaaatctccta
atttttggctggggacgctggaaagatatcctgaacctcggccgcttcaaatggcactta
aacgagaaagacatggagatgatctgcagggcactcttggtctactgtgtgaaacattac
aaaggagatgagaaaatcaaaagcttcatatgggatctaatcacccccatgaaggatggg
tataaccaagcacttcagaatcattcaggtttatctgcacctgttccccgtggaaggaaa
ggaaagaagttgaagaaccaaatgctgttgcctgagataaagaatgcagactggctagcc
agctgtaacccagagattgttctgcatgacgacagctacaagaagcatctcaagcagcac
tgcaacaaagttctcctgagagtgcgtatgttgtattacctcaaggctgaggtattggga
gatgctgcaagcaaaattttggaaggagaaaatgccagagacctggaagtactgttacca
gatatagattatgtggagatacctgtggactggtgggatgcagatgctgataaatctctc
ctgcttggtgtttacaaacatggatatgagaggtactttgccatgcgggcagatcctgca
ctttgtttcctggagaaggtaggaatgccagacgagacctcgctcactgtagatggagta
aatgatgtgactccagaaagtggagatcggagtgcattgaaggaagaaactaaggaagaa
atagtgaatacacaacaagagcaggatacaaatgacagcactgggaaagaagaaaaaaga
gatgaggagagcaatatagctgagaatctgcaagcccaggatagccctgaaccagacaaa
ctttgttggcctgcagcatcaattcttaccgcacgacttcgccggttgatcactgtatac
cagcgatgcaaccgtagggaccttgcgaggccagaggttttggttcctaccaaccatagt
tactggttacaggaggagatggccagaagagcagaaatggaccccattatgaaggaaatg
cagaaaagatggaccagaagagagcaggcagacttctacaggacagtatcctcctttggt
gtaatatatgatcctgagaagaagtgctttgactggagccagtttcgtgctttgtcccgt
cttgataagaagactgatgaaagcctagagaaatatttccacagctttgtcgctatgtgc
aggaatgtctgccgccttccactcaggaaagacgatggttcagccgatccctctcttttc
ttggaccccataacggaagaacgagcagcaagaacgctgtatcgtattgaactactgagg
aaggtcagagaacaagtgctaaggcacccacaactccatgagcgtctgaaactctgccga
ccaagcctttatcttccagtatggtgggagtgcggcaaacatgataaagatctactgatt
ggcactgccaagcatgggcttagccgtacagattattatataatgaatgacacacagctg
tcctttttagatgcatataggaattatgcccaacaaaaaagtaatggtggggagaacatg
tgttaccatttccagatgaattccaaggcacatgagccaccatcttgtcatttggaacgg
acatgtgaatcagcaaagctcaaacctgataaagaaattaaaatagaagctgaagaggct
actattacaaatcaaacctgtagtcctcctgacctttcatgtgaaaattttatttctcaa
gtcggagatatgatttcaaacaaccatgatgagtgctctatgtctgattccctgatgtgc
atgatctgcgatgagaagacttgcaatagtgcactgttagataccaacaatagtgagcaa
cgctctctcacccaggagagtttcttggggttgggctctaagaatgagccaactgattat
tcactgagcaagaccaaagtggatgatatattgcctgttgaggagtctgtatctagagac
tgtttcttgggaagtagtgaaaaggatgagccaatagaaggcatagatagaataaatgaa
ccatttggtgattcagggtgccatcttggtttggcagcagaggactgtgagaaagcacag
gtggaagccattggacagcaagtcttagacgatgataacttttgttcatctcttagccag
actgctgaacaatctttaggtctagatcttgagtttctagataaaacatttgatgaccat
tcagcactaagtcccagtatcaatgaggacaaagactgtgggatagctggtgaacattct
gaaagcacacatataaatccattacctgtgcaagagaaagaagaatggggggccgatctt
caggaactaaaagaggatcctattgtaaaatggcaaaatgagctaaatgacatgaacaat
cctccactggatgacaccctaaaagaccaggaggtagaggatctcagtatagaaaaggat
agcttaacatcaaagagtagttactgcgtcccttctttggaagtgaacgattgtgcagag
atgaaacaaaaaaacagccttatgctttctgggctcttaaaacaaaatgctgaagacttg
aaagagagaatagcaggagaaaatgttgtggaagaattcaaggttccattggagggaaac
gaaaaaatcaagcttgaagaaggtgaggttaagaaagaagtgaagaaagagaatgtggag
gaagagtgcaactgcaaagaagacagcacaaattgcggcaggatgtggatgtggagatca
gaaaccacagattatctcgataaatacacagaggaagatgtaaaagcttgttccctgtct
gttcctgaagaatcacatcaggatttccaagatggccgtgctccaaccattgctcagctt
ttgcaggagaaaacactctattccttctctgaatggcccaaggatcgagttatcataaac
cgaatagataacatctgtcatgcagtgttgaagggaaaatggccctcctccagccaacag
tttgaagcccagtgcatggtgccatcctcagtgctgggtacatgtacaagaagcagtagc
tatccagcttcagaagcacaaaatatggtctacagcaatggttctcctgtgcctcatgcc
cagaaagagccattatcagcaacaacgtttccaatcgaagaaaggaagcaaagaaggcca
tttgagtttgacagcgagaggcccgatggcaaacatagaggaatggagcacctcagccct
acccatggtcggactaattccgcactaaatggctggagagatgctgccttagagctgtgc
agggagcaggctgctggcggaggctcttcctactccatgaacaccagcacccccaagatg
actggcatcagtgggctacagagttccttgggaatggacttgtcggggattctgcaagcc
gggctgatccatcccgtgactgggcaaattgtgaatggtagcattcggagggacgagtcc
tctttgcgtaggagaagagggaggagaaaaaatgtggagggcattgatctgggtttccta
aaggacaggggcatgcatgctggaattctgggactccgagaagtgccaaaccaacaaggc
tctgggcacacagaaagctccatccctgcctctacgcgttctactgttcatggagctaaa
cttcatccagaaaaagtaatctccaacaaaagcctcttggagtggcttcggcagcaatct
gattgtaccattgatatgccaacttatgggggtagcttttctgagaagcccaagcagagg
agacagcgctgcaaggagcccagcaaaccagattttaacttgatggcaggggatgaccga
gtgccagcagttaacaaggacacagggcagcagggattcctcccagaaagcaagtttggc
agaacgctgtcagagccacttatgcatgataccatgcccaggaggcgaggcaggcggcct
cgaagcgaactgctcaaatctgtggtgcctgattctccttcgggcatgggaccacttttt
atgaacggtctaattgctgggatggatatagtgggattacagaacatgaggaacatgcaa
gggatcccgttaactgggctggttgggttccctgctggatttactacagtctccaccaat
gaggaagttaaaaacaccttaagcatgttacccatgatgctccctggcatggccgctatg
cctcagatgtttggcgttggagggattatcaacccttctatctcatcatctgtgccaacg
tctttaggaagcacaattaaaagtggtatctcactccctgaaaaggccactgaggacaaa
gacgcatgcccagaaactaaacaagatgctgcaccttctgaaaagtctgttggatccttt
caggagaaatccgaacctgcagtgactaccagcagccctttagcttttaacccattcctt
atccctggcatgtccccaagtctactgtacccttccatgtttttgtcgcctggaattggc
atggccttaccaggggttcaaaccaaccggctgtcagagtcaggtggcattgatcctcag
cggcgaaggaggaagaagacaaaaggggattcccagacttccgaacaggagactgtgccc
gtcacagaaagcacagaaaatgagcaactctcccccagagctcagaactgtgacacaaat
aatgagccggcgtctgagaaagaccaggaggattctggtttaaaagatactctagatgac
accaattag
DBGET
integrated database retrieval system
