Xenopus laevis (African clawed frog): 108702868
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Entry
108702868 CDS
T01010
Symbol
trim25.S
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108702868 (trim25.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108702868 (trim25.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108702868 (trim25.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108702868 (trim25.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
108702868
NCBI-ProteinID:
XP_018094111
Xenbase:
XB-GENE-17341988
UniProt:
A0A1L8END8
A0A974BUB0
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Position
9_10S:47162288..47190920
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AA seq
622 aa
AA seq
DB search
MAQSLESLAEELTCSICLGLFNIPVTIPCGHNFCGECLELAWETSMLSQYRCPQCMCTFS
AKPDLRKNTLLSNLVSQLKSVHIEPPQHNVMVEEVVEEPCDTDVVLCDSCMKLPAARTCL
TCLASFCEEHLQPHLESPAFIHHLLKQPLRDLHVRKCQDHDKLLDQYCKEHSCCICCYCL
TSHKQCNTCTLQEGKTEKEKDFRMLLQSLNQKIEKASNTADEVKREQIQVVDIANKKKNL
LEGEFEEIIALIEQEKKKSMRKIEEEEKKVNTKFSYTLNIIGKKKQEFGKMKSSIESLLR
EEDDLQFLKQAPKLHGTISKEPYKPKTEFDEKLLNQIFRNTVSLKEIIKVKLQQPDDTPE
WRESLASTEKMPTGSGHPKQEDTPEWSASSTSSEKIPPVVKQPKQKKSRAKVPSSPSVPS
PDVKTNPQGNTKKGPAIPDSREDVLKYAVKLTVDPNTAHKRVLLSERHTKLMISDKVQDY
QDNPERFTHCSQVLCSQGFSQGIHYWEVDIQGGHFSGFGIAYRSIPRKGVESRLGRNSVS
WCLEYFNGKLQAWHNEKETSLTSPNTNRIGVLLNYDEGFLSFFSVSKKFSQIYRFRARFT
EAVYPAFWVFSANAVLSFNTFS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatcactggagagcttggcggaagaactaacctgctccatctgtttgggactg
ttcaacatcccagtgacaataccctgtgggcacaatttctgtggcgagtgcttggaactt
gcctgggaaacatctatgctgagtcagtacagatgcccccagtgtatgtgcaccttttcc
gctaagcctgacctgaggaagaacaccctattgagcaacctggtcagccaactaaaaagc
gttcacattgaacctccgcagcacaacgtgatggtggaggaggtagtagaagaaccctgt
gacacagatgtggtgctctgtgacagctgcatgaagttgccagctgctaggacctgtctg
acctgcctggcatccttttgtgaagaacacctgcagccacatcttgagagtccagccttt
atacaccacttgctaaagcagcccctgagggacctgcatgtaaggaaatgccaggatcat
gataaactacttgatcaatactgcaaggaacactcctgctgcatctgctgctactgtctg
accagccacaagcagtgcaacacctgcaccctccaagagggcaaaacggagaaggagaaa
gattttagaatgctcttgcagtcattgaatcagaaaatagaaaaagcctcaaatacagct
gatgaagtaaagagagagcaaatacaagtggtggatattgcaaataagaagaagaatcta
ttggaaggggagtttgaagaaattatagctttaattgagcaagagaaaaagaaatccatg
aggaaaattgaggaagaggagaagaaggtgaacactaaatttagctatacattgaacatc
attgggaaaaagaaacaggagtttgggaaaatgaaatcaagcattgaatctctcttacgg
gaagaagatgatctgcagtttttgaagcaggcacccaagctgcatggcactatctctaag
gagccttataagccaaagacagagtttgatgagaaactactgaaccagatttttcgcaac
actgtttcccttaaagagatcatcaaagtcaaactgcagcaacccgatgatacaccagaa
tggagagagtcacttgccagtacagagaaaatgccaacaggatctggacaccctaaacaa
gaagatacaccagaatggagtgcatcatctaccagctcagagaaaattcccccagtagtc
aagcaacctaaacaaaaaaaatcgagagccaaagttccttccagcccatcagtaccctca
ccagatgtcaaaaccaaccctcaaggtaacaccaagaagggacctgctattccagactct
cgggaagatgttctgaaatatgctgttaaactgacagtggatcccaatacagctcacaaa
agagttttgctttctgaaagacacaccaaattaatgatcagtgataaagtccaggattac
caagacaatcctgagaggttcacacactgctcccaggtcctatgctcccagggattcagc
caaggcatccattactgggaagtggacatacaagggggacatttcagtggctttggaatt
gcctacaggagtattcctcggaaaggagtggagagccgccttgggcgcaacagtgtgtcc
tggtgcctggagtatttcaatgggaaactgcaggcctggcacaatgagaaggagaccagc
cttacctctcccaacacaaacagaattggggttctgctcaattatgatgaaggatttctg
tcctttttctctgtttcaaaaaagttcagccagatttacagattcagggcccgatttact
gaagcagtttatccagctttctgggtattttctgccaatgctgttctgtcctttaacaca
ttcagttaa
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