Xenopus laevis (African clawed frog): 108702890 Help Entry 108702890         CDS       T01010                                  Symbol itgb5.S Name (RefSeq) integrin beta-5 isoform X1   KO K06588   integrin beta 5 Organism xla  Xenopus laevis (African clawed frog) Pathway xla04145   Phagosome xla04148   Efferocytosis xla04510   Focal adhesion xla04512   ECM-receptor interaction xla04810   Regulation of actin cytoskeleton xla04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:xla00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108702890 (itgb5.S)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     108702890 (itgb5.S)    04148 Efferocytosis     108702890 (itgb5.S)   09144 Cellular community - eukaryotes    04510 Focal adhesion     108702890 (itgb5.S)   09142 Cell motility    04820 Cytoskeleton in muscle cells     108702890 (itgb5.S)    04810 Regulation of actin cytoskeleton     108702890 (itgb5.S)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:xla04131]     108702890 (itgb5.S)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:xla04515]     108702890 (itgb5.S) Membrane trafficking [BR:xla04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     108702890 (itgb5.S) Cell adhesion molecules [BR:xla04515]  Integrins   Integrin beta subunits    108702890 (itgb5.S) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_beta Integrin_B_tail Integrin_b_cyt I-EGF_1 EGF_integrin EGF_2 EGF_TEN EGF_Teneurin vWA_SIBA-E DUF2975 Motif Other DBs NCBI-GeneID:  108702890 NCBI-ProteinID:  XP_018094146 Xenbase:  XB-GENE-17346765 UniProt:  A0A8J0U031 LinkDB All DBs Position 9_10S:48221684..48262026 Genome browser AA seq 809 aa AA seqDB search MNCGQAEVKAGRGVGGAEAAGSGEGGSGQVPDREDRESRCQSWGCHRKKHYGNLRSGSPE LGTRYSHSQHYGTQRGNGQKRTEPGSTGGIATLLPGTESGRSKCVYDTECNFSILQRVPS YTPSVCLVLPGGAAASFKVHVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAAEMK KLTSNFRLGFGTFVDKNMSPFSYTAPKYQNNPCTGYKYFPVCVPSFGFRHLLSLTDKANS FNAEVQKQRVSRNRDAPEGAFDAILQASVCGDRIGWRKEASHLLVITTDDVPHVALDGKL AGVVQPHDGQCHLNENNEYSASDKLDYPSLALLGDKLSENNINLIFAVTKSHYVLYKNFT SLIPGTTAEILDQDSQNIIQLIVSAYNNIRSKVELMVSESPEDLSLSFTATCQDGVSYPG VKKCGDLKIGDTVSFEVSVEARNCHPPGTEHTFTIKPVGFRDTLEVTVTYNCSCSCSQQV ETASSKCSSNGTYTCGVCDCDPGFLGARCECGEEEISSDVSQNTCREAEGKTVCNGRGRC LCGLCVCYESEFGIISGSFCQCDDFSCARYKGVLCSGHGECDCGECKCHAGYIGDNCNCT IETRSCLSDDGQMCSGKGNCVCGKCQCIEPGAFGKTCEKCPTCPDACGTKRDCIECRLYQ TGRLADNQTCQKLCKDEIITVEELSTDNPEVAVCIYKTESDCVMRFTYSEESGRSVLRVL KEPECASAPDTLTVLLAVVGSILLIGLVLLAVWKLLVTIHDRREFSRFQSERSRARYEMA SNPLYRPAVSTHNVEEMYSMLSKSYNGTT NT seq 2430 nt NT seq  +upstreamnt  +downstreamnt atgaattgcggccaggcagaggttaaggctgggagaggagtaggaggagctgaggccgct gggagtggggaaggagggtccgggcaggtcccagaccgggaggatcgggagtcccggtgc cagagttggggctgccatagaaaaaaacattatgggaacctgagatcggggagcccggag ttggggacgcgctactcacactcgcaacactatgggacacagcgggggaatggacagaag cgcacggagccgggttctactggcgggatcgctactttgctgcctggtaccgagtctggg aggtccaaatgtgtgtacgacacagagtgcaacttcagcatcttgcaaagagtgccttct tacacaccatcagtgtgcctggtgctcccaggaggggctgcagcttcatttaaggtccat gtgcggcaggtagaagactaccctgtggatctctattacctgatggatttatctctttcc atgaaagatgacctggacactatccgaaatctgggaaccaaactagctgcagaaatgaag aaactgaccagtaactttcgcttgggctttggaacctttgtggataagaacatgtcccct ttctcttacactgcccctaaatatcagaacaacccttgcactggatacaaatactttcct gtttgtgttccctcatttggatttcgtcaccttctctcactcactgacaaggcaaacagc tttaacgccgaggtacagaagcagcgagtatcacggaacagggatgccccagaaggggct tttgacgccatcctgcaggcatccgtgtgcggggatcggattggctggaggaaagaggcc tctcacctacttgtaatcaccactgacgacgttccacatgttgcgctggatggaaaactg gctggtgtggtgcagcctcatgatgggcaatgccaccttaatgaaaataatgagtacagc gcttctgataaactggattatccatcgcttgctctgcttggagacaaactgtctgagaac aacattaaccttatatttgctgtcaccaaaagccattatgtgctgtacaagaacttcact tcactgattcctggtaccacagcggagatcctggaccaggattcccagaacatcattcag ctaattgtcagtgcctataataacatccgctctaaggtggaactgatggtgtcggagagc cctgaggatctcagcctgagttttactgccacgtgtcaagacggtgtatcgtacccaggg gtcaagaagtgcggagacctaaaaattggtgacactgtgtcatttgaggtgtcagttgag gccagaaactgccacccccctggcacagagcacacattcacaatcaagcccgtgggattc cgtgacacgctggaggtgactgtcacctataactgcagttgcagctgctcccaacaggtg gagacagcgagcagcaaatgcagcagcaatgggacctacacttgtggtgtctgtgactgt gaccctggcttcctgggggcccggtgtgagtgcggagaggaagagatcagcagtgacgtg tcccagaatacctgcagggaggccgaggggaagacagtgtgcaatggccgtggcaggtgc ctgtgtggcttgtgtgtgtgctacgagagtgaatttggcatcattagcggctccttctgt caatgtgacgacttctcttgcgccaggtacaagggcgtcctgtgctcaggtcacggagaa tgcgactgtggagagtgcaagtgccatgctggctacattggcgacaactgtaactgcacc atagagaccagaagttgcctctctgatgatggccagatgtgcagcggaaaaggcaactgc gtctgtgggaagtgtcagtgcattgagccgggggcttttggaaaaacttgtgagaagtgt cccacgtgccctgatgcctgcggaaccaaaagggactgcattgaatgccgactttaccaa acggggcgactcgctgataaccagacatgtcagaagctctgcaaagacgagatcatcaca gtggaggagctcagcactgacaatccagaggtggctgtgtgtatttacaagacagaaagt gactgtgtcatgcgattcacttactctgaggagagtggcagatctgtcctgagggtcctg aaggagcctgaatgtgccagtgcccctgataccctcactgtactgctggcagttgtgggc agcatactgctaataggcctcgtccttctggcagtctggaagctgcttgttaccattcat gaccgacgcgaattctccagatttcaaagcgaacgttcgagggcccgatatgagatggca tcaaaccctctgtaccggccagctgtctccacacacaacgtagaggagatgtacagcatg ctgagcaagtcctataatggtaccacatag

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