Xenopus laevis (African clawed frog): 108702924
Help
Entry
108702924 CDS
T01010
Symbol
tuba4b.S
Name
(RefSeq) tubulin alpha chain isoform X1
KO
K07374
tubulin alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04145
Phagosome
xla04210
Apoptosis
xla04530
Tight junction
xla04540
Gap junction
xla04814
Motor proteins
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108702924 (tuba4b.S)
09142 Cell motility
04814 Motor proteins
108702924 (tuba4b.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108702924 (tuba4b.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108702924 (tuba4b.S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108702924 (tuba4b.S)
04147 Exosome [BR:
xla04147
]
108702924 (tuba4b.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108702924 (tuba4b.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108702924 (tuba4b.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108702924 (tuba4b.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108702924 (tuba4b.S)
Exosomal proteins of other body fluids (saliva and urine)
108702924 (tuba4b.S)
Exosomal proteins of colorectal cancer cells
108702924 (tuba4b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
108702924
NCBI-ProteinID:
XP_018094215
Xenbase:
XB-GENE-17341026
UniProt:
A0A8J0TSW8
LinkDB
All DBs
Position
9_10S:complement(53326054..53339757)
Genome browser
AA seq
452 aa
AA seq
DB search
MGRNRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG
AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDP
VLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQV
STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEYPTYTNLNRLISQIVSS
ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFE
PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIGAIKTKRTIQFVDWCPTGFKVGINY
QPPTAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE
FSEAREDMAALEKDYEEVGIDSYEEEDEGEEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggccggaatagggagtgcatctcagtccatgtggggcaggcaggagtccagatgggc
aatgcatgctgggagctgtactgcctggaacatgggatccaaccagacggtcagatgccc
agtgacaaaaccattggtggaggggacgattccttcaacaccttcttcagtgagacagga
gctggaaagcatgtcccccgcgctgtgtttgtggacctggagcccacagtgattgatgag
gtgcgcacaggaacgtaccggcagctatttcatccagagcaactcatcacaggcaaagaa
gatgccgccaataactatgcccgagggcattacaccattggcaaggaaatcattgaccca
gttctggacagaattcgtaaattggctgatcagtgcacaggactgcagggatttttagtc
ttccacagctttgggggtggcactggctctggattcacctccctgctgatggaacgtctc
tctgttgactatggcaagaagtccaagctggaattctccatctatcctgctcctcaggtt
tcaacagctgtggtggaaccctacaactccatacttaccactcacacaaccctggaacat
tctgactgtgccttcatggtggataatgaagccatttatgacatctgcagaaggaacctg
gacattgaatatccaacctacaccaatcttaatcgtcttataagccagattgtgtcctct
atcactgcctctctcagatttgatggggcacttaatgtggacctaactgagttccaaaca
aacttggtaccctacccccgtatccatttccctctggccacatatgcccctgttatctct
gcagagaaagcttatcatgagcagctctctgtatctgagatcacaaatgcatgctttgag
ccagccaatcagatggtgaaatgtgacccccgtcacggtaaatacatggcctgttgcctg
ctgtaccgtggtgatgttgtgccaaaagatgtcaatgctgctattggtgccatcaagaca
aaacgcaccatccaatttgttgactggtgcccaactggtttcaaggttggtatcaactat
cagcccccaacagcagttcctggtggggatctggccaaagtgcagcgtgctgtgtgcatg
ttgagcaacaccaccgccattgccgaggcctgggctcgcctggatcacaagtttgacctt
atgtatgccaagcgtgcctttgtgcactggtatgtaggggagggcatggaggaaggggag
ttctctgaggcccgtgaagatatggctgccctggagaaggattatgaagaggttggaatt
gattcctatgaagaggaagatgaaggagaggagtattaa
DBGET
integrated database retrieval system
