KEGG   Xenopus laevis (African clawed frog): 108702925
Entry
108702925         CDS       T01010                                 
Symbol
tuba1cl.2.S
Name
(RefSeq) tubulin alpha-1A chain
  KO
K07374  tubulin alpha
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04145  Phagosome
xla04210  Apoptosis
xla04530  Tight junction
xla04540  Gap junction
xla04814  Motor proteins
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108702925 (tuba1cl.2.S)
  09142 Cell motility
   04814 Motor proteins
    108702925 (tuba1cl.2.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108702925 (tuba1cl.2.S)
   03036 Chromosome and associated proteins [BR:xla03036]
    108702925 (tuba1cl.2.S)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    108702925 (tuba1cl.2.S)
   04147 Exosome [BR:xla04147]
    108702925 (tuba1cl.2.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108702925 (tuba1cl.2.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108702925 (tuba1cl.2.S)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108702925 (tuba1cl.2.S)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108702925 (tuba1cl.2.S)
  Exosomal proteins of other body fluids (saliva and urine)
   108702925 (tuba1cl.2.S)
  Exosomal proteins of colorectal cancer cells
   108702925 (tuba1cl.2.S)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 108702925
NCBI-ProteinID: XP_018094218
Xenbase: XB-GENE-22063602
UniProt: A0A8J1LRK4
LinkDB
Position
9_10S:53355026..53358350
AA seq 451 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQISTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagggagtgcatctcagtccatgttgggcaggcaggagtgcagattggcaatgcatgc
tgggagctgtattgcctggaacatgggatccaaccagatggtcagatgcccagcgacaaa
accattggtggaggggatgattccttcaacaccttcttcagcgagacaggagctggaaag
catgtcccccgcgctgtgtttgtggacctggagccaactgtgatcgatgaggttcgcaca
ggtacctaccgtcagcttttccaccctgagcaactcatcacaggcaaagaagatgcagcc
aataactacgcccgaggacattacaccatcggcaaggagataattgacctggtgctggac
agaatccgcaagctggctgaccagtgcactggacttcagggcttccttatcttccacagc
tttgggggtggcactggctctggattcacctcactgctgatggaacgtctctctgttgac
tatggcaagaagtccaagctggaattctccatctatccagcacctcaaatctccacagct
gtggtggaaccctacaacgctatcctcaccacccacacaaccctggaacattctgactgt
gccttcatggtggataatgaagccatttatgatatctgcagaaggaacctggacattgaa
cgtccaacctacacaaatttgaaccgtctgattggccagattgtgtcttctatcacagct
tccctcagatttgatggagctctgaatgtggacctgactgagtttcaaaccaacttggtt
ccctacccccgtatccatttccctctggccacctatgcccctgttatctctgcagagaaa
gcttatcatgagcagctctctgtttctgagatcacaaatgcttgctttgagccagccaat
cagatggtgaaatgtgacccccgtcatggtaaatacatggcttgttgcctgctataccgt
ggtgatgttgtgcccaaagatgtcaatgctgctattgccacaattaagaccaagcgcacc
atccagtttgtggactggtgcccaactggtttcaaggttggtatcaactaccagccacca
actgtggttcctggtggggatctggccaaggtacagcgtgctgtgtgcatgttgagcaac
accaccgccattgctgaggcctgggctcgtctggatcacaagtttgaccttatgtatgcc
aagcgtgcctttgtgcattggtatgtaggggaagggatggaggaaggggagttctccgag
gcccgtgaagatatggctgctctggagaaggattatgaagaggttggcactgacagtgtg
gagggagagggagaagaagagggagaagaatattaa

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