Xenopus laevis (African clawed frog): 108703087
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Entry
108703087 CDS
T01010
Symbol
smurf1.S
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04120
Ubiquitin mediated proteolysis
xla04137
Mitophagy - animal
xla04144
Endocytosis
xla04340
Hedgehog signaling pathway
xla04350
TGF-beta signaling pathway
xla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108703087 (smurf1.S)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108703087 (smurf1.S)
04350 TGF-beta signaling pathway
108703087 (smurf1.S)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108703087 (smurf1.S)
04137 Mitophagy - animal
108703087 (smurf1.S)
09144 Cellular community - eukaryotes
04520 Adherens junction
108703087 (smurf1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108703087 (smurf1.S)
04121 Ubiquitin system [BR:
xla04121
]
108703087 (smurf1.S)
03029 Mitochondrial biogenesis [BR:
xla03029
]
108703087 (smurf1.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108703087 (smurf1.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108703087 (smurf1.S)
Autophagy
Mitophagy
Other mitophagy associated proteins
108703087 (smurf1.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
HECT type E3
108703087 (smurf1.S)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108703087 (smurf1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
108703087
NCBI-ProteinID:
XP_018094540
Xenbase:
XB-GENE-17332942
UniProt:
A0A974H1K4
A0A1L8EPZ7
LinkDB
All DBs
Position
9_10S:complement(83102776..83131518)
Genome browser
AA seq
729 aa
AA seq
DB search
MSNAVTRRGGSSIRVRLTVLCAKNLVKRDFFRLPDPFAKLVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKMDSITISIWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDSDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTLYEDAGPGRPLSCFMDEPA
PYTDGPGAAGGGSCRLVESPGQEQRLQAQRLRGPEVREQTPQNRSHGYQSQDLPEGYEQR
TTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDDLGSLPTGWEVRTTVSGRIYFVDHNN
RTTQFTDPRLHHIINHQSQLKEPNHSIQMQSDGSIEDGDEFPAQRYERDLVQKLKVLRHE
LSLLQPQAGHCRVEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWL
YLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYING
GFTVPFYKQLLGKPIQLSDLEFVDPELHKSLVWILENDITSVLDHTFCVEHNAFGRLLQH
ELKPNGKNLQVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFEQKEL
ELIIGGLDKIDIGDWKANTRLKHCLANSDIVQWFWQAVESFDEERRARLLQFVTGSTRVP
LQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPHYESYEKLYEKLLTAV
EETSGFAVE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgctgtgactcggagaggtggatcgagtatcagggttcgtctgacagtttta
tgtgccaagaacttagtaaagagggattttttcaggttacctgatccatttgctaaacta
gttgtagatggatctggtcagtgccactcaacagacactgtaaagaacacattggaccca
aagtggaatcagcattatgacctgtatgttggtaaaatggattcaatcacaatcagcatc
tggaatcataagaaaattcacaagaaacagggagctggcttcctggggtgtgttagacta
ttatccaatgccattagcagattgaaagacacaggctaccagcgcttggatctatgcaaa
ttaaatcccacagacagtgatgctgtgcgtggccaaattgtagtcagtttacagacacga
gatagaattggtacgggtggttctgttgttgattgcagaggactgctagaaaatgaaggg
acactttatgaagatgctggccctggcaggccccttagttgtttcatggatgaaccagct
ccttatactgatggaccaggtgcagctggaggaggatcctgcaggctagtagaatctcca
ggtcaagaacagagactccaggcacagaggcttcgtggaccagaagtccgagagcagaca
cctcaaaatcgatcccatgggtaccagtcacaggacttgcctgaaggttatgaacaaaga
actacagttcaggggcaggtgtatttcttgcacacgcaaacaggtgtcagcacatggcat
gatccccgaataccaagagaccttaacagcgtgaattgtgatgaccttggctctctgcct
actggatgggaggttagaaccactgtgtctggaagaatatactttgtagaccacaataat
cgcacaacacagttcacagatccaagactacatcacatcataaaccatcagtcccagcta
aaagagccaaatcattctattcaaatgcagagtgatggatctatagaagatggggatgaa
tttcctgctcagagatatgagagagacttggtacaaaaacttaaagtcctgaggcatgag
ttatcgttgctgcagcctcaggcagggcactgccgtgttgaagtgtcaagagaagaaata
tttgaggagtcatatagacaaataatgaagatgagacccaaagatctgaagaaaaggttg
atggtgaaattccgtggagaagaaggacttgattatggtggagttgcaagggagtggctg
tatttactatgccatgaaatgctgaatccatattatggacttttccagtattctacagac
aatatttatactctgcaaattaatcctgattcatctattaatccagatcatttatcttat
ttccattttgttggtcgaatcatgggattggctgtgtttcatggacactacattaatggg
gggtttacagttcctttctacaaacaacttttggggaagcccattcagctgtctgacctg
gaatttgtggatccagagctgcataaaagcctggtttggattttagagaatgacattact
tcagtgttagaccacacattctgtgttgagcacaatgcatttggccgacttcttcaacat
gaattaaaaccaaatggcaagaacctacaagtaacagaagaaaacaagaaagagtatgtg
aggttgtatgttaattggaggttcatgagagggatagaggctcagttcttagctctgcag
aaaggttttaatgagctaataccacaacatctgttgaagccatttgagcaaaaagaacta
gagcttattatcggtggcttggataaaattgacatcggtgactggaaggcgaacactaga
ctaaaacactgcttagctaatagcgatattgtacaatggttctggcaagcagtggagtcg
tttgatgaggagagaagggccaggctacttcagttcgtcaccggctctacgcgtgttcct
ctgcagggctttaaagctcttcaaggttctacaggtgctgctggacccagactttttact
attcatctgattgatgctaacacagataaccttccaaaagctcacacctgctttaaccga
attgacattcctcattatgaatcatatgaaaagctctatgagaaattactaacagccgta
gaagagactagtggttttgctgtggaataa
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