Xenopus laevis (African clawed frog): 108703105
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Entry
108703105 CDS
T01010
Symbol
ciita.S
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xla01001
]
108703105 (ciita.S)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xla04054
]
108703105 (ciita.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108703105 (ciita.S)
Protein kinases [BR:
xla01001
]
Serine/threonine kinases: Other
TAF1 family
108703105 (ciita.S)
Pattern recognition receptors [BR:
xla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108703105 (ciita.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NPHP3_N
NLRC4_HD2
NB-ARC
LRR_14
LRR_8
RsgA_GTPase
AAA_16
LRR_9
Roc
ABC_tran
AAA_22
AAA
HisK_N
nSTAND3
DUF87
TsaE
AAA_14
Motif
Other DBs
NCBI-GeneID:
108703105
NCBI-ProteinID:
XP_018094567
Xenbase:
XB-GENE-6488252
UniProt:
A0A1L8EQ46
A0A974BVD7
LinkDB
All DBs
Position
9_10S:86221453..86275010
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AA seq
1047 aa
AA seq
DB search
MSTMDLSTIDMSALNWSLESELDLETLLTLDLSDIEQHLNDDPLDFELEDNNCNNIIDYD
EEYDKIERICNYICDEDHLMESFLEGDVSSGNPLEAPTNGTEHSSKESKRKRKVKPVTSK
RKRIKKTPTVLQCMDATGVQHSPDGQLVSQSLSAPGGSILSSVPLIKVGNCVNMEPGTIL
GKLLPGFTPQHIISLPPGTNIIFYTAPTALSPPLQAQPVTPVSTVTISEIPTVPTSIPCS
PDKNCSFSPFTPAATDLPNSPEATVMSQYPLKEYVDMFRTALTEKYKNCLALEKDLLYTD
IALVKTKIGPKVGKGTCKTVEKELVIYDFDEREKETVDPSSLFADKERKEMETNIIALIG
QSGMGKSVLVKKICQDWSNGKYSQFSLVFFFEWSVLASCKKQCSLKDLLFELSSCPQARN
VEIYQYVLRNPEKVLLIFDSVDEFQDSEGLLQASFTASPTKTYKIKELFTGLFQKKLLRG
CTMLITARPRDKFNQYLTKVDQIVEMAGFSQQQVEWYIKEYFKSLPDFTNMLIWIKEHEY
LFRYCYIPFLCRIMCLFAEANFKVEKVECHSSLAEFMLTILQKNQETAGSGSSGFSSSEH
SNIKDEINLANRVNCKHELQVKKQHINNGNSLVQHFQTAECLMEHITDKHFVRYASLEPK
KKRNHENCSDMARRCLVGLLFRKDTRTDLLKVILKKQTKMTDYFKTIRPETLCPQRLLEL
CHCVYETRDISLSQHTAEKFSDELSFAGTRLTPPDVYVLKCILKHAHRKISLDLRRTGID
QQGLKELVKLKNIKSFRASLSDTVRLWKTLQTENNLSLLNVSVMKFRIDPFTAESMKDIV
DLTAVVNIQNEICSCLQESADGVTEIPAIKTLKKIIFRLGKNQGQNGFMKLVDILPQLPS
LQHLDLHSLIENHIGDKAVAKLAEKFPEMLSLETLDLSQNKITDVGAAQLAAALPSLSSL
RTFSLFNNFIQDEGAKKFAEILPEMSSLEKLHLAYNKISDVGARNLTASLRKCPKMKSLM
IYSSAIPHNILHHLQQQDPRISCQSFG
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgatggatctgagcactatagacatgagtgcgctgaactggagtttagagtcg
gaattggacttagaaacactgttaactttggatttatcagatattgaacaacatttgaat
gatgaccctttggattttgaacttgaagataataactgcaacaatattattgattatgat
gaagaatacgacaagattgaaagaatatgcaattatatttgtgatgaagatcatttgatg
gaaagttttttggaaggagatgtgtcctcagggaatcctctcgaagctccaaccaatgga
actgaacattcatcaaaggaatcaaaaagaaaaagaaaagtcaagccagtgacatcaaag
cgaaaaaggataaaaaaaacaccaacagtccttcagtgtatggatgcaacaggagtacag
cacagcccagatggtcagctagtatctcaaagtctcagtgcacccggaggatcaatatta
tcttcagtacctctaatcaaggttggaaactgtgtgaacatggaacctggtacaatcctc
ggtaaattactacctggattcacaccccagcacatcatcagtttgcctcctggaacaaat
atcattttctacacagcacctacagcactgtccccaccattgcaagcacaacctgtaact
ccagtatcaacagttaccatttcagaaatcccaacagttcctacaagcatcccatgctcc
cctgacaaaaactgttcctttagtccatttactcctgcagcaactgatttaccaaattcg
cctgaagcaactgtcatgagtcagtaccctctgaaagaatatgtggacatgtttagaact
gctttgacagagaagtacaagaactgcttggccttggaaaaagatttactctacactgac
attgcacttgtaaaaaccaaaattggccccaaagttgggaaaggtacctgtaaaacagta
gagaaggaacttgtgatttatgatttcgatgagcgggaaaaagaaacagtggacccttcc
agtctttttgccgataaagaaaggaaagagatggagacaaatataattgcactgatagga
caatcaggaatggggaaaagtgtccttgttaaaaaaatttgccaagactggtccaatggg
aaatattcacagttcagtttagtgttcttttttgagtggagtgtgcttgcttcttgtaaa
aagcagtgcagcttgaaagacttgctttttgaattgtcttcctgcccacaagcgaggaat
gttgaaatctatcagtatgttctgagaaacccggagaaagtcctgcttatctttgatagt
gttgatgagtttcaagactcagaaggtctgctgcaggcttcttttactgcatcccctaca
aaaacctataaaataaaggaattattcactggccttttccaaaagaagctgctgcgaggg
tgcaccatgctaatcactgcaagaccaagagataaatttaaccagtacttaacaaaggtg
gatcagattgtagaaatggctggattttctcagcaacaggtggaatggtacatcaaggaa
tattttaagagtcttccagattttactaatatgctaatatggataaaagaacatgaatat
ctattcagatattgttatatcccctttttgtgtaggataatgtgtctttttgctgaagct
aattttaaggttgagaaagtggaatgtcactcttctttagcagaatttatgttgactata
ctgcagaaaaaccaagagactgcaggctcaggttcctccggcttttcatctagtgagcac
tccaacataaaagatgaaatcaatttggctaacagagttaattgcaaacatgaacttcaa
gtaaaaaaacaacatataaacaatggaaactcactggttcagcactttcaaacagccgag
tgtctcatggaacatataacagataagcattttgtcaggtatgcgtcactggagcccaaa
aagaaacgaaatcacgaaaattgcagtgatatggcacgaaggtgcttggttggcctttta
tttcgcaaagatacaagaacagatttgctgaaagtcattctaaaaaaacaaacgaaaatg
actgactacttcaagactatacggcctgaaacactttgtccacaaagactacttgaactt
tgtcactgtgtctatgagacacgtgacattagtctcagtcaacacacggctgaaaaattt
agcgatgaactttcatttgcgggtaccagacttacacccccagatgtatatgtgttaaaa
tgcatcttgaaacatgcacacagaaaaatatccctggatctgaggagaacaggaattgat
caacaaggattgaaggagttggtgaaactgaaaaacatcaagtcattcagggcatctctc
agtgacacagtcagactctggaagaccttacaaaccgaaaataacctcagcctcttaaac
gtgtctgttatgaagttcagaattgatccattcacagcagaaagcatgaaagatatagtc
gatctcactgccgttgtcaacatccagaatgaaatttgcagttgccttcaagaatcagca
gatggggtcactgaaattccagccatcaaaacacttaagaagatcatatttagacttggg
aagaatcaaggacaaaatgggttcatgaagcttgttgacattcttccacagcttccatct
ctccaacacttagatttgcattctcttattgagaatcatatcggtgataaagcggttgca
aagctggctgagaaatttcccgaaatgctgtctcttgaaacactggacttatcacaaaac
aagataactgacgtaggagcagcacaactagccgcagctctcccttccttgagctctcta
cgcacatttagtttattcaacaacttcatccaggatgaaggtgccaagaaatttgctgag
atacttcctgaaatgtcttccctggaaaagttacatttagcatacaacaagattagtgat
gttggggctcgcaatcttacagcgagccttaggaaatgtcccaaaatgaagagtttgatg
atatacagttcagcgattcctcataatattttgcatcatctgcaacagcaggacccaagg
atcagttgccagtcgtttggctga
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integrated database retrieval system
