Xenopus laevis (African clawed frog): 108703213
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Entry
108703213 CDS
T01010
Symbol
tsc2.S
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04115
p53 signaling pathway
xla04140
Autophagy - animal
xla04150
mTOR signaling pathway
xla04218
Cellular senescence
xla04910
Insulin signaling pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108703213 (tsc2.S)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108703213 (tsc2.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
108703213 (tsc2.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108703213 (tsc2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
108703213
NCBI-ProteinID:
XP_041433937
Xenbase:
XB-GENE-17345101
UniProt:
A0A8J1LWQ0
LinkDB
All DBs
Position
9_10S:complement(102922548..102989521)
Genome browser
AA seq
1757 aa
AA seq
DB search
MAKQTGRDPGLKEKVKMLLGLGPTRGKAKPSEWKHPECVITAELMKELSAESALHVRLRA
INQVCELAKTKKLEEHAVEAICQAVCDLLQPEQPAEGRFHVLHLLKAIILGQGEKLGVLR
AYFFQIIKDYPSNEDVAERLEVFKALTDNGREIAYLEEELAAFVLRWMDIGLTPDFLHVL
VNLVKFNSCYLEHFIAPTVQMICLLCNRTTSPYDIEVSLKVLDAVVCYNCLPSESIPIFV
ITLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYTMSRIMEDRVHMEDAPVLRGAVFFVG
MGLWGAHRLFCLKNSPISVLPSFLKAMNCNDAVVSYEIVLSVTRLIKKYGKDVQAATWDV
LLDIIERLFQQLQVLRSQELKAAVHKLLTTIEELYKLNEFHGDEERFFELLEKGADERPT
ASVVNLITYRAQSIHPGKEGWVMNLQKLMDRYFRNESRSVVRMKVLDVLSVALSINRQFY
EDELIEKVVTCQLAHIPEDKDHQVRKLATQLLVDLAECCHSCQFSSLMDIIEKVVNRSLS
TPESGHDSSSLEDVKTSVLGLMVILQTKLYILPASHAMRVYEMLINHIQLHYKYKYNSPI
ATSIRLQVFDFLLHLRADSLWRVGLPNKDGAFRFSPYCLCESINEQEKRTAERKPAGTLS
PPSGSPSLPSQTVALRMGFLPFSLAFGVILQCLKQETDWKVMKLVLNKLPQCLRYKLLNL
SSPCDIDQLAASLCAMLTDKTASDRLYITPDSFSRTDLQLAVVPVLTALTSYHQHLELSK
QRDMVRCLETGLIFRCAKQCVVALSMCMIEMPSILIKSLPVLIVRLTHISATVTMAIPML
EFLSTLVRLPHLYANFAAEQYASVFAISLPYTNPSKFNQYIVFLAHHVIAMWFIRCRLSL
RRDFVPYITKGLRSNVLLSFDDTPEKDSFRARSTSLNERPKSRVQNSVTSSSLSSADESS
MAQADDSLKNLHLELTEICLDMMARYAFANFTAVPKRSPVGEFLLDGGRTKTWLVGNKLI
TITTSVGMRTRSLLGLDTGENQGDPENSSPVQTEQVKEFPSMLDLQQRKPGMQTPRHRVR
SMSGGTTLRAGSLEGTPLSISMGQPGAEKPSRRTQVKNEKTTLADFVPVLTQGWAEVLVR
RPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERLKEHRETALYKSLSVPASTL
SPSTAKTTLLQRANTVASVYLVTQSSGQGKLLRSISWAESCAVPEEGAQADGEPEEGTTP
GGFQELEDFEAVVGEDTTSEEKTAKKMECISRSSSTSSQEESAATQTEESDAGGIPIEGS
TREVPFQTLSKSSSSPELQALQELPKELSSTEDMKKPTADFKTLPHIETPSSHRTKSDEE
RSTGLLVKSEGRMRLEPELPVLSPQSPTGHRPRGHTISDSEPSRRGRRIQVDPFKNSTKA
EKVPGIDPSFVFLQLYHSPFFGDESNKPILVPNTQTFERTMSLLDRIPPYDTHKIGVLYV
GEGQVGNERAILSNEHGSYRYTLFLTGLGKLIELKDTQPDKIFLGGMDGCGDDGQFTYCW
HDDIMQVIFQITTLMPNKEIDPNFCNKKRHVGNNFVNIIYNDSGEFYKLGTLKGQFNFVD
VNIQPLECESNLVTLQCRKDMEGLVDTSVAKIVSDKNLPFLARQMALHSNMASQVHHSRS
NPTDIYPSKWIARLRHIKKMRPKIQEELQELSSSMPYQVTTISNKPPSQNPQTPPGAFET
GQRTRLISAVDDFTEFA
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagacgggtagagatcctggactgaaggaaaaagttaaaatgttattggga
ctgggacctacacgagggaaagccaagccttcagagtggaagcatccggaatgtgtcatt
actgcagaattaatgaaggaactgagcgctgagtctgctctccacgttcgcctgcgtgca
attaatcaggtctgtgagctcgcaaagacaaaaaaattagaagagcatgcagtagaagca
atatgccaagcagtttgcgacttgctacagcctgaacagcctgcagaaggtcgatttcac
gttctgcacttattgaaggccattattttggggcagggtgaaaaacttggtgtccttcgt
gcctattttttccaaatcataaaagattatccttcaaatgaggacgttgcagagcggcta
gaagtttttaaagctctgacggacaatgggagagaaattgcatatctagaggaagagctt
gctgcctttgtcctccggtggatggatattggtttgactccggatttcttgcatgttttg
gttaacctggttaagttcaatagctgttatttggaacactttattgctcctacggtgcag
atgatatgcctcctctgtaatcgtactacatctccttatgacattgaggtatccttgaag
gttctggatgcagtggtctgctataactgccttccgtcggagagtatacccatatttgtt
ataaccctgtgccgcacaataaatgttaaggagctgtgtgaaccatgctggaagctgatg
cgtaacctgctgggcacccatctaggtcacagcgccatttatactatgagccgtataatg
gaggatagagtccatatggaagatgcccctgtgctgagaggagctgtgttctttgtcgga
atgggtctctggggagctcacaggctgttctgtctgaagaactcgccaatatctgttctc
ccttctttcctgaaggctatgaactgtaacgatgctgtggtctcctacgagattgttttg
tctgtgacgcggctaatcaaaaagtacggcaaggatgtgcaggctgccacgtgggatgtc
ctcctggatataatcgagcgcttattccagcagcttcaggtcctgcgaagtcaagaatta
aaggctgcggtgcacaaactgctgaccaccatagaggaactttataaactgaacgaattc
catggagatgaagagagatttttcgagctgcttgaaaaaggggcagatgaaagacccacg
gcatcagttgtgaaccttatcacctacagagctcagtccattcaccctggtaaagaaggg
tgggttatgaacctacagaagctaatggacagatatttcaggaatgaatctcgcagtgtt
gtacgcatgaaggtcttagatgttctgtctgttgcactgagcatcaatcgacagttttac
gaggacgagttgatcgagaaggtagtaacgtgccagttagcccatatacctgaggataag
gaccatcaggtgcgaaaactcgcaacacagctacttgtggacttggctgaatgctgtcac
tcctgccaattcagcagtctgatggatatcattgagaaggtggttaaccgttctttgtct
acaccagaatcaggtcatgattcttcttctttagaagatgtgaaaacatctgttctgggg
ctgatggttattctacagaccaagctatacattctgccagctagtcatgccatgcgtgtg
tatgagatgctgatcaatcatatccagcttcactacaaatacaagtacaactcgcccatt
gctaccagtatacgcctccaggtttttgacttcctcctccacctccgagctgattccttg
tggcgtgttgggctacctaacaaagatggtgccttcagattcagcccctattgtctctgt
gaatccataaatgaacaagagaagagaacagctgaacgtaagccagcaggcaccttatca
ccaccctctggcagtccaagtctcccatcacaaactgttgctctgcgcatgggatttctg
ccattctctctagcatttggggttatcctgcagtgcctaaaacaggaaactgactggaaa
gtcatgaaactagtgctgaacaaactgccacagtgtctgcgttacaaactcctcaacctt
tcatccccctgcgatatagatcaacttgctgcctcactctgcgctatgcttacagataag
actgcaagtgatcgcctttacattactcccgatagcttctctcgtactgatctgcaactg
gcagtggttcctgtgctgactgccttaacctcataccaccaacacctagagctctctaaa
cagagggatatggtgaggtgtctagaaacaggcttgatctttcgctgtgccaagcagtgt
gtagtggcactttccatgtgcatgatcgagatgccaagcattcttataaaatctctgcca
gtcctcatcgtgaggctaacccatatatccgccacagtcaccatggccattccgatgctg
gagtttctatcaaccttggtccgcctgccccacttgtatgcaaactttgctgcagagcag
tatgccagtgtatttgccatctcccttccatacaccaacccatcaaaatttaaccaatac
attgtatttctggcacaccatgtaattgctatgtggttcatccggtgcagactatccctg
cggagagactttgtgccgtatataacaaagggtttgcgatccaatgtcctgctgagcttc
gatgacactccagaaaaggacagcttcagagctcgcagtaccagcttaaacgaaagaccc
aaaagccgcgtgcagaactctgtcaccagctccagcttgagttccgctgatgagagttct
atggcccaggctgatgacagcctgaaaaaccttcacctggaattgacggaaatctgcctg
gatatgatggcccgatacgcctttgccaacttcacggctgtgcccaaaaggtcgcctgtt
ggtgagttcctgctggatggcggaagaacaaagacctggctggttgggaacaagctgata
acaattacaacaagcgtgggcatgaggacacgttctcttcttggcttggatacaggggag
aaccagggtgacccagaaaacagctctcctgtgcaaacagagcaagtcaaggaatttccg
tccatgctggatcttcagcagagaaaaccgggtatgcaaacgccccgtcacagagtccgc
tccatgtctggagggactacactgagagctggatcattggaggggacccctctttcaatc
agtatggggcagccgggagcagagaaaccttcccgtaggacccaggtgaagaatgaaaag
accaccctggctgactttgttcctgtactgacacaaggctgggcagaagtgttggttcgc
agacccacaggtaacacaagctggttgatgagcctggaaaaccctctgagtcccttctct
tccgacattaacaacatgccgctgcaggagctttctaacgcattaatggcagccgaaagg
ctcaaagagcaccgggagacggcgctctacaaatctctctctgtgccagcctccacttta
tctccctccacagccaagactactcttctacagcgcgcaaacacagtggcctctgtgtat
ctcgttacccagtccagtggtcaaggaaagctgcttaggagcatttcctgggcagaatct
tgcgctgtgccagaagaaggagcacaagctgacggggaaccagaggaagggactactcct
gggggctttcaagagcttgaagattttgaggctgtggttggtgaagacactaccagtgag
gagaagactgctaagaagatggagtgcattagcaggtcttcatccacatccagtcaagaa
gagtctgctgctacccagacagaagaatctgatgctggtgggatacctattgagggctcc
actcgtgaggtcccgtttcagactttgagtaagtccagctcatctcccgaacttcaggcc
ttgcaagagcttcctaaagagttgagctctacagaagatatgaagaagccaactgccgac
ttcaaaacactgccccacatagaaactccttcaagccatagaactaaatctgatgaggaa
cgcagcactgggttattagtcaagtcagaaggcaggatgagactggaaccagagttgcct
gttttgtctccgcaatctccaactggccaccgcccaaggggtcacactatctctgattct
gagccatcccgcagagggaggaggattcaggttgatcctttcaagaacagcaccaaagct
gagaaagtgcctggaatagacccaagctttgtatttttgcagttgtaccattcgccgttc
tttggtgatgagtcaaataagcccatactggtccctaacacacaaacgtttgaaagaaca
atgagccttctagatcgaatcccaccatatgacacccacaaaattggagttctttatgtt
ggagaagggcaggttggcaatgagcgtgctatcctatccaatgagcatggctcgtaccgc
tacaccctgttccttactgggcttgggaaactgattgagctgaaagacactcaacctgac
aagatctttctgggagggatggacggttgtggagatgacgggcagttcacctactgctgg
cacgatgatattatgcaagttatttttcagatcaccaccctgatgccaaacaaagagatc
gatccaaacttctgcaataagaaacggcacgtgggcaacaactttgtcaatatcatctat
aatgactcgggcgagttctacaagttgggtaccctgaagggtcagttcaacttcgtagat
gtcaacattcagcctttggaatgcgaaagtaacctggtgacgctgcagtgccgaaaagat
atggaaggccttgtagataccagtgtggcaaaaattgtgtcggacaaaaacctgcccttc
ctggcccgtcagatggctttacattcaaatatggcttcccaagtccatcacagtaggtcc
aaccctacggacatttacccttctaaatggattgccaggctccgacacataaagaagatg
agaccaaagatacaagaggagttgcaggagctgagttccagcatgccctaccaggtcact
actatctccaacaagcccccttcacagaacccacagactccccctggtgcttttgaaact
ggccagaggacacggctcatttctgctgtggacgatttcactgaatttgcttaa
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integrated database retrieval system