Xenopus laevis (African clawed frog): 108703213
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Entry
108703213 CDS
T01010
Symbol
tsc2.S
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04115
p53 signaling pathway
xla04140
Autophagy - animal
xla04150
mTOR signaling pathway
xla04218
Cellular senescence
xla04910
Insulin signaling pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108703213 (tsc2.S)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108703213 (tsc2.S)
09143 Cell growth and death
04115 p53 signaling pathway
108703213 (tsc2.S)
04218 Cellular senescence
108703213 (tsc2.S)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108703213 (tsc2.S)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108703213 (tsc2.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
108703213 (tsc2.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108703213 (tsc2.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
108703213
NCBI-ProteinID:
XP_041433937
Xenbase:
XB-GENE-17345101
UniProt:
A0A8J1LWQ0
LinkDB
All DBs
Position
9_10S:complement(102922548..102989521)
Genome browser
AA seq
1757 aa
AA seq
DB search
MAKQTGRDPGLKEKVKMLLGLGPTRGKAKPSEWKHPECVITAELMKELSAESALHVRLRA
INQVCELAKTKKLEEHAVEAICQAVCDLLQPEQPAEGRFHVLHLLKAIILGQGEKLGVLR
AYFFQIIKDYPSNEDVAERLEVFKALTDNGREIAYLEEELAAFVLRWMDIGLTPDFLHVL
VNLVKFNSCYLEHFIAPTVQMICLLCNRTTSPYDIEVSLKVLDAVVCYNCLPSESIPIFV
ITLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYTMSRIMEDRVHMEDAPVLRGAVFFVG
MGLWGAHRLFCLKNSPISVLPSFLKAMNCNDAVVSYEIVLSVTRLIKKYGKDVQAATWDV
LLDIIERLFQQLQVLRSQELKAAVHKLLTTIEELYKLNEFHGDEERFFELLEKGADERPT
ASVVNLITYRAQSIHPGKEGWVMNLQKLMDRYFRNESRSVVRMKVLDVLSVALSINRQFY
EDELIEKVVTCQLAHIPEDKDHQVRKLATQLLVDLAECCHSCQFSSLMDIIEKVVNRSLS
TPESGHDSSSLEDVKTSVLGLMVILQTKLYILPASHAMRVYEMLINHIQLHYKYKYNSPI
ATSIRLQVFDFLLHLRADSLWRVGLPNKDGAFRFSPYCLCESINEQEKRTAERKPAGTLS
PPSGSPSLPSQTVALRMGFLPFSLAFGVILQCLKQETDWKVMKLVLNKLPQCLRYKLLNL
SSPCDIDQLAASLCAMLTDKTASDRLYITPDSFSRTDLQLAVVPVLTALTSYHQHLELSK
QRDMVRCLETGLIFRCAKQCVVALSMCMIEMPSILIKSLPVLIVRLTHISATVTMAIPML
EFLSTLVRLPHLYANFAAEQYASVFAISLPYTNPSKFNQYIVFLAHHVIAMWFIRCRLSL
RRDFVPYITKGLRSNVLLSFDDTPEKDSFRARSTSLNERPKSRVQNSVTSSSLSSADESS
MAQADDSLKNLHLELTEICLDMMARYAFANFTAVPKRSPVGEFLLDGGRTKTWLVGNKLI
TITTSVGMRTRSLLGLDTGENQGDPENSSPVQTEQVKEFPSMLDLQQRKPGMQTPRHRVR
SMSGGTTLRAGSLEGTPLSISMGQPGAEKPSRRTQVKNEKTTLADFVPVLTQGWAEVLVR
RPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERLKEHRETALYKSLSVPASTL
SPSTAKTTLLQRANTVASVYLVTQSSGQGKLLRSISWAESCAVPEEGAQADGEPEEGTTP
GGFQELEDFEAVVGEDTTSEEKTAKKMECISRSSSTSSQEESAATQTEESDAGGIPIEGS
TREVPFQTLSKSSSSPELQALQELPKELSSTEDMKKPTADFKTLPHIETPSSHRTKSDEE
RSTGLLVKSEGRMRLEPELPVLSPQSPTGHRPRGHTISDSEPSRRGRRIQVDPFKNSTKA
EKVPGIDPSFVFLQLYHSPFFGDESNKPILVPNTQTFERTMSLLDRIPPYDTHKIGVLYV
GEGQVGNERAILSNEHGSYRYTLFLTGLGKLIELKDTQPDKIFLGGMDGCGDDGQFTYCW
HDDIMQVIFQITTLMPNKEIDPNFCNKKRHVGNNFVNIIYNDSGEFYKLGTLKGQFNFVD
VNIQPLECESNLVTLQCRKDMEGLVDTSVAKIVSDKNLPFLARQMALHSNMASQVHHSRS
NPTDIYPSKWIARLRHIKKMRPKIQEELQELSSSMPYQVTTISNKPPSQNPQTPPGAFET
GQRTRLISAVDDFTEFA
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagacgggtagagatcctggactgaaggaaaaagttaaaatgttattggga
ctgggacctacacgagggaaagccaagccttcagagtggaagcatccggaatgtgtcatt
actgcagaattaatgaaggaactgagcgctgagtctgctctccacgttcgcctgcgtgca
attaatcaggtctgtgagctcgcaaagacaaaaaaattagaagagcatgcagtagaagca
atatgccaagcagtttgcgacttgctacagcctgaacagcctgcagaaggtcgatttcac
gttctgcacttattgaaggccattattttggggcagggtgaaaaacttggtgtccttcgt
gcctattttttccaaatcataaaagattatccttcaaatgaggacgttgcagagcggcta
gaagtttttaaagctctgacggacaatgggagagaaattgcatatctagaggaagagctt
gctgcctttgtcctccggtggatggatattggtttgactccggatttcttgcatgttttg
gttaacctggttaagttcaatagctgttatttggaacactttattgctcctacggtgcag
atgatatgcctcctctgtaatcgtactacatctccttatgacattgaggtatccttgaag
gttctggatgcagtggtctgctataactgccttccgtcggagagtatacccatatttgtt
ataaccctgtgccgcacaataaatgttaaggagctgtgtgaaccatgctggaagctgatg
cgtaacctgctgggcacccatctaggtcacagcgccatttatactatgagccgtataatg
gaggatagagtccatatggaagatgcccctgtgctgagaggagctgtgttctttgtcgga
atgggtctctggggagctcacaggctgttctgtctgaagaactcgccaatatctgttctc
ccttctttcctgaaggctatgaactgtaacgatgctgtggtctcctacgagattgttttg
tctgtgacgcggctaatcaaaaagtacggcaaggatgtgcaggctgccacgtgggatgtc
ctcctggatataatcgagcgcttattccagcagcttcaggtcctgcgaagtcaagaatta
aaggctgcggtgcacaaactgctgaccaccatagaggaactttataaactgaacgaattc
catggagatgaagagagatttttcgagctgcttgaaaaaggggcagatgaaagacccacg
gcatcagttgtgaaccttatcacctacagagctcagtccattcaccctggtaaagaaggg
tgggttatgaacctacagaagctaatggacagatatttcaggaatgaatctcgcagtgtt
gtacgcatgaaggtcttagatgttctgtctgttgcactgagcatcaatcgacagttttac
gaggacgagttgatcgagaaggtagtaacgtgccagttagcccatatacctgaggataag
gaccatcaggtgcgaaaactcgcaacacagctacttgtggacttggctgaatgctgtcac
tcctgccaattcagcagtctgatggatatcattgagaaggtggttaaccgttctttgtct
acaccagaatcaggtcatgattcttcttctttagaagatgtgaaaacatctgttctgggg
ctgatggttattctacagaccaagctatacattctgccagctagtcatgccatgcgtgtg
tatgagatgctgatcaatcatatccagcttcactacaaatacaagtacaactcgcccatt
gctaccagtatacgcctccaggtttttgacttcctcctccacctccgagctgattccttg
tggcgtgttgggctacctaacaaagatggtgccttcagattcagcccctattgtctctgt
gaatccataaatgaacaagagaagagaacagctgaacgtaagccagcaggcaccttatca
ccaccctctggcagtccaagtctcccatcacaaactgttgctctgcgcatgggatttctg
ccattctctctagcatttggggttatcctgcagtgcctaaaacaggaaactgactggaaa
gtcatgaaactagtgctgaacaaactgccacagtgtctgcgttacaaactcctcaacctt
tcatccccctgcgatatagatcaacttgctgcctcactctgcgctatgcttacagataag
actgcaagtgatcgcctttacattactcccgatagcttctctcgtactgatctgcaactg
gcagtggttcctgtgctgactgccttaacctcataccaccaacacctagagctctctaaa
cagagggatatggtgaggtgtctagaaacaggcttgatctttcgctgtgccaagcagtgt
gtagtggcactttccatgtgcatgatcgagatgccaagcattcttataaaatctctgcca
gtcctcatcgtgaggctaacccatatatccgccacagtcaccatggccattccgatgctg
gagtttctatcaaccttggtccgcctgccccacttgtatgcaaactttgctgcagagcag
tatgccagtgtatttgccatctcccttccatacaccaacccatcaaaatttaaccaatac
attgtatttctggcacaccatgtaattgctatgtggttcatccggtgcagactatccctg
cggagagactttgtgccgtatataacaaagggtttgcgatccaatgtcctgctgagcttc
gatgacactccagaaaaggacagcttcagagctcgcagtaccagcttaaacgaaagaccc
aaaagccgcgtgcagaactctgtcaccagctccagcttgagttccgctgatgagagttct
atggcccaggctgatgacagcctgaaaaaccttcacctggaattgacggaaatctgcctg
gatatgatggcccgatacgcctttgccaacttcacggctgtgcccaaaaggtcgcctgtt
ggtgagttcctgctggatggcggaagaacaaagacctggctggttgggaacaagctgata
acaattacaacaagcgtgggcatgaggacacgttctcttcttggcttggatacaggggag
aaccagggtgacccagaaaacagctctcctgtgcaaacagagcaagtcaaggaatttccg
tccatgctggatcttcagcagagaaaaccgggtatgcaaacgccccgtcacagagtccgc
tccatgtctggagggactacactgagagctggatcattggaggggacccctctttcaatc
agtatggggcagccgggagcagagaaaccttcccgtaggacccaggtgaagaatgaaaag
accaccctggctgactttgttcctgtactgacacaaggctgggcagaagtgttggttcgc
agacccacaggtaacacaagctggttgatgagcctggaaaaccctctgagtcccttctct
tccgacattaacaacatgccgctgcaggagctttctaacgcattaatggcagccgaaagg
ctcaaagagcaccgggagacggcgctctacaaatctctctctgtgccagcctccacttta
tctccctccacagccaagactactcttctacagcgcgcaaacacagtggcctctgtgtat
ctcgttacccagtccagtggtcaaggaaagctgcttaggagcatttcctgggcagaatct
tgcgctgtgccagaagaaggagcacaagctgacggggaaccagaggaagggactactcct
gggggctttcaagagcttgaagattttgaggctgtggttggtgaagacactaccagtgag
gagaagactgctaagaagatggagtgcattagcaggtcttcatccacatccagtcaagaa
gagtctgctgctacccagacagaagaatctgatgctggtgggatacctattgagggctcc
actcgtgaggtcccgtttcagactttgagtaagtccagctcatctcccgaacttcaggcc
ttgcaagagcttcctaaagagttgagctctacagaagatatgaagaagccaactgccgac
ttcaaaacactgccccacatagaaactccttcaagccatagaactaaatctgatgaggaa
cgcagcactgggttattagtcaagtcagaaggcaggatgagactggaaccagagttgcct
gttttgtctccgcaatctccaactggccaccgcccaaggggtcacactatctctgattct
gagccatcccgcagagggaggaggattcaggttgatcctttcaagaacagcaccaaagct
gagaaagtgcctggaatagacccaagctttgtatttttgcagttgtaccattcgccgttc
tttggtgatgagtcaaataagcccatactggtccctaacacacaaacgtttgaaagaaca
atgagccttctagatcgaatcccaccatatgacacccacaaaattggagttctttatgtt
ggagaagggcaggttggcaatgagcgtgctatcctatccaatgagcatggctcgtaccgc
tacaccctgttccttactgggcttgggaaactgattgagctgaaagacactcaacctgac
aagatctttctgggagggatggacggttgtggagatgacgggcagttcacctactgctgg
cacgatgatattatgcaagttatttttcagatcaccaccctgatgccaaacaaagagatc
gatccaaacttctgcaataagaaacggcacgtgggcaacaactttgtcaatatcatctat
aatgactcgggcgagttctacaagttgggtaccctgaagggtcagttcaacttcgtagat
gtcaacattcagcctttggaatgcgaaagtaacctggtgacgctgcagtgccgaaaagat
atggaaggccttgtagataccagtgtggcaaaaattgtgtcggacaaaaacctgcccttc
ctggcccgtcagatggctttacattcaaatatggcttcccaagtccatcacagtaggtcc
aaccctacggacatttacccttctaaatggattgccaggctccgacacataaagaagatg
agaccaaagatacaagaggagttgcaggagctgagttccagcatgccctaccaggtcact
actatctccaacaagcccccttcacagaacccacagactccccctggtgcttttgaaact
ggccagaggacacggctcatttctgctgtggacgatttcactgaatttgcttaa
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integrated database retrieval system