Xenopus laevis (African clawed frog): 108703238
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Entry
108703238 CDS
T01010
Symbol
rai1.S
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108703238 (rai1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108703238 (rai1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
DUF3461
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
108703238
NCBI-ProteinID:
XP_018094811
Xenbase:
XB-GENE-6487537
UniProt:
A0A1L8EQZ9
A0A974H1W4
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All DBs
Position
9_10S:106436199..106550260
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AA seq
1820 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQPTSQESSRLENYRHQSQPALNCERHRQVTKSYYAHTSYQGYE
NSVGEKYPRDEKQISVQQLQGRVSFASFSEGNVYPGHYTGEDGLQNWGQSQTLGGTKYEE
NLIKKTPGEGRGYQDPAGQSPFRSHSLHHPQQQALPYAKIPRQKVQNNVPSSPLSFSQAS
HFNQSFPTSTYSTVTGGSQVSHTYKSCTAPSNPQHDHTMAAAGQRVQTIHGYQSNRMTSY
EQPQLHHAQETLHYQNMAKYQHYSQQNQTYCQSETPSRTPEQYYQPFSPSASHSPARSVG
RSPSYSSTPSPLMPNLENFQYNQQQQQHNTGTFPLSMADHSHYMPLINPSPTGTSSPESQ
SKSLQNDKLPETLLSDLSLQSLTALTSQVENISNTVQHLLLSKSGVPQKKVIKTSPRTPE
QIKGQHCSPESSTYSSEQIGTPLSEALGTPQSVHTEIPDTDYLSGSEDQLERNYLYCGSG
QSPARANNCKMKTESISTCSVTSPDNMSTKSDDSFQSIQASLPLETFAKLVSSERECPHL
LVNALSQEELSTEIIALQDAIDNEKTEKAWVDSPVLSNNSQKSPLNLENSSACIESAMQT
WSGQENVEEFSEDLKKSITEEVRPRNQDTCYSDKSFVRKELPPEPIEVTETIDNSGSLGS
DKNITAATSSASYTSSSDTSASTTCSKTMDPFDWPDKNMTESCLRWKDLELSLHESDLEK
DLFQVKDNKIVCQLDVPDVETPLENDSGEDFNKEGAGDLAYTDIGKTDNEKWLEDTRDCY
TEEDFQDIPDIPSQKDSNLEPEDYSSLCDFSDRKSFIYDNSPSKPLKDMETVSSVNTPES
TENPSLEEKENSAPSQLSGHSIILLGPAVATESKVKSWFESTITHIKTVGDIKEKNEEDA
EACALEPLTLPDGEMKDLKVQDNQLDVKAEELLERKPLCSKKNTCRAVEAVESDKVAQNP
VGETAKADNEKAQEEAPNTMAIVLVAKAPVVGVIPARMCTRSSTAKADPQVNGGAVGPPL
LHQEKTNKKGEFNVKEITSFKSGRRGGKAAMKLVSSCDRKNFMLQSKSPSKLSSQKAKEN
SIAPLKDEKSMILRSRSKKQELFQTKRRKGKRGMSVVIKKRACLKKILANNCTVPDTFKL
IPKVKRGMKLSNSGVPINAKVSDRCLHSLKRKPNFISPVPAKKKNLILRSKNVKEEKSEP
RPHLFKKIRAAKKEKVNLTIAAKKTCKVILKTPSVRLTPELCIKVSSRSSYAGAVKTKVL
PPRKGRGLKLEAIVQKITSPNQKKQGIPGACLYNLVTAGDNNLNALTTGKEMKALSLVSA
DNETRTVSQNNTLTSEPDLHSPSCRSSNNRSLKGAQLHRKKLASSSLHCTSTCRGTEQEG
NYIKAKRLRTVPKRRIRRGRSKGALNSPKNTSKRQIRASPSVLLTSKGKALSESVHQTNK
CKQSELKETSSVPSGVEETSSQVQARKKTKYAKFNGYTKRQRNNAPQNKPTKQTTVGKRT
ARKKSVPLISPKEPKIKLKYVSTKPVRSECRVRAFSPYVQVEKKNEYTTTCTVINTAVEE
SRLLKERSITHLVPHSASFVSSGTLPLSSRMQLGPLVCKAVPSGCLVCCLCRNPANFKDL
GDLCGPYYPMDCLPNKKFRPKDKFRIGDLPQEKTPKISDSVCTVGGGRAPCPDSGELDLS
NHNKLRTSARGLLRKLPSCYCCRKKVEIAETEKPRRHQYSKTLEPPSPELETQEHWVHEA
CAVWTSGVYLVAGKLYGIHEAIQMAATGLCPKCQRPGATVGCSHKTCEKSYHFTCAVEAG
CLLSEENFSLRCPRHKKHLV
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgggaaaggtgtggtttccatggcaaccagcagaactaccaaccaaca
tcacaggagtcatcacgcctggagaattaccgacatcaaagtcagccggcactcaactgc
gagcgacacaggcaggtgaccaaaagctactatgcccacacgtcctaccaaggctatgaa
aacagcgtgggggagaagtaccccagggacgaaaagcaaatcagtgttcagcagctgcaa
ggaagggtgtcttttgccagtttctcagagggtaatgtgtaccccggacattatacaggg
gaagatggactgcagaactgggggcaatctcagactttgggtgggaccaaatacgaggaa
aacctaataaaaaagacacccggggaaggaaggggttaccaagatccagccgggcagagc
ccgttccgctcacattcgctgcatcacccacagcaacaggccctgccctatgccaagatt
cccaggcagaaagttcagaacaatgttccatcctctcctctatccttttcccaagcctcc
cacttcaaccagagttttccaacgtcaacctattccacagtcacagggggaagccaagtc
tcccacacttacaagagctgcacggccccctccaaccctcagcatgaccacaccatggct
gcggctggtcagcgggtgcagacgatacacggctaccagtcaaatcgaatgacttcttac
gaacagccacagctccaccatgctcaggagacactgcactaccaaaacatggccaaatat
caacactacagtcaacagaatcaaacttactgccaatcagaaactcccagccgaactccg
gaacagtattatcagcctttcagtcccagtgccagccattcaccagctcgttcagtgggc
aggtccccatcttacagctctactccctctcctctgatgccaaatcttgagaactttcaa
tataatcaacaacagcagcagcataacactggcacatttcctttaagcatggctgaccac
agtcattacatgcctcttataaatccgtcacccacaggaacgtccagtccagagtctcag
agtaaaagtctgcaaaatgataaattaccagaaaccttgctgtctgatcttagcctgcag
agcctcacggctctgacatcccaagtggaaaacatctccaacactgtgcagcacctgctt
ctttctaaaagtggagttcctcaaaagaaagtgatcaagacatctccgaggactcctgag
caaataaaggggcaacactgcagcccagaaagtagcacatattcttctgagcagattgga
actcctttatccgaggcacttggtacccctcagtctgtgcacaccgagattccagataca
gactatctcagtggctcagaggaccagcttgaaaggaactatttgtactgcggttcaggc
caaagcccagccagagccaacaattgcaaaatgaaaacagaatctatctctacttgttct
gtaacttcaccggataatatgtctacaaagtcagatgattcgtttcaaagtatccaggcc
agccttccactggagacctttgctaaactggtaagcagtgagagggaatgcccacattta
ctggttaatgccctttcccaggaggagctatctactgaaattatagcccttcaagacgct
attgataatgagaaaacagagaaggcctgggtggattcccctgtcctcagtaataactcc
caaaaatctcctttaaatctcgaaaacagctcagcttgcatagagtctgcaatgcaaact
tggtcaggccaagagaatgtagaggaattctctgaagatttaaagaaaagcattacggag
gaggtcagaccgaggaaccaagacacgtgttacagcgacaagtctttcgtaaggaaagaa
ttaccaccagagccaattgaagtgacagaaaccattgacaattctggcagtttaggttct
gataagaatattacagccgcaacatctagtgccagttataccagctcctctgatacatct
gcaagtacaacttgttcgaagacaatggatccctttgattggccggataaaaacatgact
gaatcatgcctaaggtggaaagacttggagctcagtctgcatgaatcagaccttgaaaaa
gatttattccaggtcaaggataataaaattgtctgtcagctcgatgtccctgatgttgaa
actcctttagaaaatgactccggcgaggattttaacaaggaaggagcaggggacttggcc
tacacagacattggtaagactgacaatgagaagtggcttgaagatactagagactgttat
actgaagaagactttcaagacattcctgatatcccatcccaaaaagactcaaacctggag
ccagaagattattcttcattgtgtgatttttcagatagaaaatctttcatttatgacaac
tccccgtcaaaacccttaaaagacatggaaactgtatcttccgttaataccccggagtct
acggaaaacccaagccttgaggagaaagaaaattcagctccatctcagctctctggtcac
tccatcatcctgcttggcccagctgtggccacagaatctaaagtgaaaagttggtttgaa
tccaccataacacacattaaaactgtgggggacataaaagaaaagaatgaagaggatgct
gaagcctgtgcacttgaacctctaaccctcccagatggagaaatgaaagaccttaaagtg
caggataatcagctggatgtgaaagctgaagagctactcgagaggaagcctctttgcagt
aaaaagaatacatgcagagcagtagaagcagttgagtctgacaaagtggctcagaaccct
gtcggtgaaacagctaaggcagataatgagaaagcacaagaggaggcaccaaatacaatg
gccattgttctggtagccaaggctccagtagttggagtaattccagcaagaatgtgtacc
cgatcctcaactgcaaaggcagatcctcaggtgaatgggggagcagtggggcctccactg
cttcatcaagagaaaaccaataaaaagggagagttcaatgtaaaggaaataacctctttt
aaaagcggtagaagaggtggaaaagctgcgatgaaactggtatcttcttgtgacagaaag
aactttatgcttcaaagcaagtcacctagcaagctcagcagtcagaaagctaaagaaaac
agcattgcacctctcaaggatgaaaagtccatgatcctgaggtctcgcagcaagaagcag
gaactcttccaaaccaaaaggaggaaaggaaagagaggaatgagtgtggttattaaaaag
cgggcatgcttgaagaaaatcctggctaacaactgtacagttccggacacattcaagttg
attccaaaagtcaaacgaggcatgaagctttcaaactcaggtgttccgatcaatgccaag
gtgtctgaccgatgtctacattctctgaaacggaaaccaaactttatttccccagtacct
gccaaaaaaaagaacctgatcttacgcagcaaaaatgtcaaagaggaaaaatcagagccg
aggcctcacttatttaaaaagattcgggcggcgaagaaagaaaaggtcaatttgaccatt
gctgcaaaaaagacatgcaaggtcatcttaaaaacaccttctgttcgtttgacaccggag
ttgtgcataaaggtgtcctcccgttcatcatatgcaggggcggtaaaaacaaaagttctg
cctcccagaaagggcagaggcctcaaactggaggctattgtacaaaagatcacctcccca
aatcagaagaagcaaggcattcctggtgcttgcttatacaatcttgtgacagctggtgac
aataacctgaatgcgcttacaacaggaaaagaaatgaaagcacttagtttagtctctgca
gacaatgaaactaggacggtaagtcaaaacaatacgctaacgtcagaacctgatctacat
tctccaagttgcagaagctccaacaataggtccttaaaaggagcacagttgcacagaaag
aaattggcctcttcctccctccactgcactagcacatgcagagggacagagcaagagggc
aattacattaaggcaaaaagactcagaacagtcccaaagaggagaatcagaagagggagg
tccaagggtgcattgaatagcccaaaaaacacatcaaaaaggcagattagggcttctcca
tctgttctcctgacatctaaaggtaaggccctttcagaaagcgttcaccaaaccaacaag
tgcaaacagtctgagctgaaggagacctccagtgttccgagtggggtggaagaaacctct
tctcaagtacaagccaggaaaaaaacaaagtatgctaagttcaatggttatactaaaagg
cagcgcaataatgcaccccaaaataagcccacaaagcaaactacagttggcaagcgtacg
gctaggaaaaagagtgtcccactcataagcccaaaggaacccaaaatcaagctgaaatat
gtctccactaaaccagtgcggtctgaatgtcgggtgagagcattctcaccttatgttcaa
gtggagaaaaagaatgagtacactacaacatgcacagtgataaatactgctgtggaagag
agcaggttgctcaaggaaagaagcatcacgcatttggttcctcactctgcctcgtttgtt
agctctggcactttgcctctctcctcccgaatgcagctggggccactagtatgcaaggcg
gtaccctctggctgcctcgtctgctgcctttgtaggaaccctgccaatttcaaagacttg
ggggacctttgtgggccttattaccctatggactgcctacctaacaagaaattcaggcca
aaggataagttcagaataggagacttgccacaggagaaaactcccaaaatctcagacagt
gtctgtacagtgggtggtgggagggcaccttgcccggacagtggggaacttgacctaagt
aatcacaacaagctgcgcaccagtgctcgagggttgttgaggaaattgcccagctgttac
tgctgcagaaaaaaggtggaaatagcagagactgagaaaccaaggagacatcagtacagc
aagaccctcgagccaccttctccggaactggaaacccaggaacactgggttcatgaggcg
tgtgctgtatggaccagcggggtttacctggtggcaggaaagctgtatggcatccatgag
gcaattcagatggcggccacagggctgtgtcccaagtgtcagaggccaggagccaccgtg
ggttgcagccacaagacgtgcgagaagagctaccactttacgtgcgccgtggaagcaggc
tgcttactcagcgaagagaacttctccttgcgatgccccagacacaagaaacacctggtg
taa
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