Xenopus laevis (African clawed frog): 108703494
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Entry
108703494 CDS
T01010
Symbol
rfx1.S
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108703494 (rfx1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Other basic domains
RF-X
108703494 (rfx1.S)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
108703494
NCBI-ProteinID:
XP_018095136
Xenbase:
XB-GENE-17339191
UniProt:
A0A8J0U558
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Position
3S:125908777..125934463
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AA seq
850 aa
AA seq
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MATQAYVTELQAAPPAPTPGTTQQYVAELQVTQPSGGSQSAGSQTPTTQQYIVVTVSEGS
VRGSDGELSPGGTPTPTAAVPTQVVQQVQAAQQRLVVQGSPQGTKAAQVSLTLHTVQQPA
LSPPHGDSPSLKAGQAQPLQLHGTQQERSVVQVNPQKSSPVHQLTVQALQHVQGTPEVQQ
LQQVPVQHVYPSQVQYVEGTEATYTGGTIRSGSYSYTETPLYSQATGSTYYESQGATGQV
SSPTSSPALASSPSLPMYVSGGQILTNTTQSAASAGTGAGASGSGTYVIQGGFIMGSSTQ
SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS
VFMGLRTRRLGTRGNSKYHYYGLRIKASSSLLRLMEDQQHLAMRQQPFSQKQRLKTVQKM
EGMSNGVGGSQQQTPGLSDISSQVQQYQQFLDASKTLPEFAEMDLQGKPLPDDITLANVK
AFQLLYREHCEAIVDVVVNLQFTLVETLWKTFWRFNQGQHSDSTIDDEAEKRLPKDCLVL
LSKYEPLLKWSRDCDHLLYQVLVETLIPDVLRPIPSALTQAIRNFAKSLESWLTSAMMNI
PEEMVRIKAGAASAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFTNVQEQ
ASWVCRCADRVVQRLEQDFKLTLQQQSSLEQWADWLDSVVSQVLKPYQGSPGFPKAAKLF
LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQARGETPIAVMGEF
ANPGSTLRSLDQDKEEEEEEDDESDEDLAHELPLTLNDPSITLGSDSLEPPAKLARSDSQ
GIFVQLPPTS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcaggcctatgtgactgagctccaggcagctccacctgctcccaccccgggc
accacgcagcagtatgtggcggagctacaggtcacacaaccctccggcggctcccagtca
gcaggatcccagactcccacaacacagcagtacattgtagttaccgtctctgaagggtca
gtgagaggcagtgacggagaactcagcccagggggaaccccgacacccacagccgcagtt
cccacacaggtggtacagcaagtgcaggcagcacagcagcggctggtggtgcaaggctct
cctcagggcactaaagcagctcaggtctccctaaccctacacaccgtgcagcagccagca
ctctcccctcctcatggggacagcccatctctgaaggcaggacaagcccaaccattgcag
ctgcatggaacgcaacaagagcgatcagtcgtacaggtgaatcctcagaaatcctccccc
gttcatcagctcacagtccaggctctgcagcatgtccaggggaccccagaggtccagcag
ctgcagcaggtcccagtgcaacatgtgtatcccagccaggtgcaatatgtggagggaacc
gaggccacgtatactggaggcaccatccgatcagggtcctactcgtacactgagactccc
ctgtacagtcaggctaccggatctacttactacgagtcccagggagccacagggcaggtc
agctctcccacctcatccccagctttggccagcagcccgtcgttgcccatgtatgtgtct
ggggggcagattctcaccaacaccacccagtctgcggcctcagctggaactggagcaggt
gctagtggatcaggaacctacgttatccagggtggatttatcatgggcagctctactcag
tcctactctcataccacacgggcctctccagccacggtgcagtggctgcttgataactat
gagacggccgagggggtgagcctaccccgcagcactctctactgccactacttactgcac
tgccaggagcaaaaactggagcctgtaaatgccgcctcttttgggaaacttatccgctca
gtcttcatgggcctgcgaacccgccgactgggcacaagggggaactccaagtaccactat
tatggcctgagaatcaaagccagctcctcactcctgcgcttgatggaggatcagcagcac
ctcgctatgcggcagcagcccttctcccagaagcagaggcttaaaactgtccagaaaatg
gaaggaatgagtaacggggtagggggctcccaacagcagactcctggtctgtccgacatc
agttctcaggtgcagcagtaccagcagttcttagatgcctcaaagacccttccagaattc
gcagagatggatttgcaggggaagcccctccctgatgatattacactggccaatgtgaaa
gctttccagctgctgtacagggagcactgcgaggctatagtggatgtagttgtgaatttg
cagtttaccctggtggagaccctgtggaaaaccttctggaggttcaaccaagggcagcac
agcgatagcaccatagacgatgaagcagagaagcgtctgcccaaggactgcctggtgctg
ctctccaagtatgagcctttgcttaaatggagcagagactgtgatcacctcctgtatcag
gttctggtggagacactcatacccgatgtactgcgccccataccaagtgccctgacacaa
gccatccgcaactttgccaagagtctggagagctggttaaccagcgcaatgatgaacata
cctgaagaaatggtgcggattaaggctggcgctgcgagtgcctttgcccagactctgcgt
cgatacacgtctctgaatcacctggcgcaggctgctcgtgccgtgctgcagaacaccgct
cagatcaaccaaatgctcagcgacctcaaccgagtggacttcaccaacgtgcaggaacaa
gcctcctgggtgtgtcgctgtgcagaccgggtggtacagaggctggagcaggatttcaag
ctgacacttcagcagcagagctccctcgagcagtgggccgactggttggatagtgttgtc
tcccaggtgctgaaaccttatcaggggagcccgggatttcccaaagcagcgaaactcttc
ctgctcaagtggtccttctacagctcaatggttataagggacctgaccctccgcagcgcc
gccagttttggatcttttcatctgattcgactgttgtacgacgagtacatgtactacctg
atagagcaccgcgtggcccaggctcggggggagacgcctatcgctgtcatgggagagttt
gcaaacccaggaagcaccttgcgctcgctggaccaagacaaagaggaagaagaggaggag
gatgatgagagtgatgaagatctggctcatgagctgcccctcaccttgaacgacccctcc
atcactttgggctctgactcgctagagcctcccgctaagctcgcaaggagcgactcccaa
gggatctttgtacagttgcctccgacctcctaa
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