Xenopus laevis (African clawed frog): 108703832
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Entry
108703832 CDS
T01010
Symbol
coro1a.L
Name
(RefSeq) LOW QUALITY PROTEIN: coronin-1A
KO
K13882
coronin-1A
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108703832 (coro1a.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108703832 (coro1a.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108703832 (coro1a.L)
04147 Exosome [BR:
xla04147
]
108703832 (coro1a.L)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Phagocytosis
Coronins
108703832 (coro1a.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108703832 (coro1a.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108703832 (coro1a.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Trimer_CC
Beta-prop_EIPR1
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
108703832
NCBI-ProteinID:
XP_041433353
Xenbase:
XB-GENE-17337624
UniProt:
A0A8J1LUZ0
LinkDB
All DBs
Position
9_10L:135437812..135450912
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AA seq
458 aa
AA seq
DB search
MSRKVVRTSKFRHVFGQAVKADQCYDDIRVSQNTWDSNFCCVNPKFLAIVVEASGGGAFM
VLPLSKTGRLDKSQPVVCGHTGPVLDIDWCPHNDNVIASGSEDCSVMVWEIPDGGLTRSL
TEPLVTLEGHTKRVGIVLWHPTALNILLSAGCDNVIMIWDVGAGQGVISIDETHTDLIYS
VAWNPSGSLXLYSCKDKKHPXYESCTPEKEKPHEGSRPVRAIFVSDEQILTTGFSRMSER
QVALWDLKSLNEPLTLQELDTSSGVLIPFFDPDTNVVYLCGKGDSSIRYFEVTDEAPYVH
YLSLYTSKDSQRGMGYMPKRGLEVNKCEIARFYKLHERKCEPIIMTVPRKSDLFQEDLYP
NTVGPEPALTAEEWLGGKDAGPLLISLREGYAPSKSRELKITKNVLNTRLPKSVGSTNKS
GSSGEPALEQILEQIKQLRVTIQGLEKRVAELEEKAAN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggaaggttgttcgcaccagtaagttccgccatgtttttggccaagcggttaaa
gccgaccaatgttacgacgatatccgggtctctcagaacacctgggactccaacttctgc
tgcgtcaaccccaaattcctggccatagtggtagaggccagcggaggcggggccttcatg
gtactgcccctctctaagacggggcgtctggacaagtctcagcctgtggtttgtggtcac
actgggccagtactggatattgactggtgcccccataatgacaatgtcattgccagcgga
tcagaggactgcagtgtcatggtgtgggagattccggatggagggctgactcgctcactc
acagaaccactagttacactggagggacacacaaagcgagtgggaattgtcctgtggcac
cccacagctctgaatatactgctgagtgcaggctgtgacaatgtgatcatgatctgggac
gtgggcgcggggcagggcgttatctctatagatgagacacacacagacctcatatacagt
gttgcctggaacccaagtggcagcctcnntctgtactcctgtaaggacaagaaacatcca
taatatgaatcatgtaccccagagaaggaaaagccccacgagggcagccggccggtccgc
gccatatttgtttctgatgagcaaatactgaccacggggttcagccgcatgagcgagaga
caagtggccctgtgggacctgaaatccctgaatgagcccctgaccctgcaggagttggac
acgagcagtggagtcctcattcccttcttcgaccccgacaccaacgttgtgtatctgtgc
gggaagggggacagcagtatccgctacttcgaggtgacggacgaggccccctacgtgcac
tacctgtccctgtacaccagtaaggattcccagagggggatgggctacatgcctaaacgg
ggcctcgaggtcaataaatgtgagattgcccggttctacaaactgcatgaaaggaagtgt
gagcccataatcatgactgtcccacgcaagtcagacctgttccaggaggatttgtacccc
aacacggtggggcccgaacctgccctgacagcagaggagtggctggggggaaaggacgcc
ggccccttgctcatctctttgcgggaaggttatgccccgagcaagagccgagaactcaaa
atcaccaagaacgtcctgaacacgcggctccccaaaagcgttgggtcgaccaacaagagc
ggaagcagcggggagccggcgctggagcagatcctggagcagataaagcagctgagagtc
acaatacagggactggagaagcgagtggcggagctggaggagaaagcggccaattaa
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