Xenopus laevis (African clawed frog): 108704009
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Entry
108704009 CDS
T01010
Symbol
phf2.L
Name
(RefSeq) lysine-specific demethylase PHF2 isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108704009 (phf2.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
108704009 (phf2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
PHD_4
Motif
Other DBs
NCBI-GeneID:
108704009
NCBI-ProteinID:
XP_041446938
Xenbase:
XB-GENE-17333904
UniProt:
A0A8J1N0A6
LinkDB
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Position
4L:153411668..153505428
Genome browser
AA seq
1091 aa
AA seq
DB search
MATVYCLCRLPYDVSRFMIECDACKDWFHGSCVGVEEDEAPDIDIYHCPNCEKTHGKSTL
KKKRNWTKQDPGQTTEVKPVQNGSQVFIKELRNRTFPSAEDIVKKLNGNQLTVELFEETG
FTEPILVPKKDALGMTVPAATFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYY
STNRKRVLNVINLEFSDTRMSSLVEAPEIVKKLSWVENHWPDDALLAKPKVTKYCLICVK
DSYTDFHIDSGGASAWYHVLKGEKIFYLIRPASANISLYERWQSASNHCEMFFADQVDKC
YKCAVKQGQTLFIPTGWIYATLTPVDCLAFSGHFLHSLSVEMQMRAYEVEKRLKIVSLTQ
FPNFETACWYVGRHFLEKFKALHKAGKQPATHLVQGAKILNGAFRSWTKKNALLEHEDEL
PEHFKPSQLIKDLAKEIRLTENASKVTKTEVSANIIAEKNNIAEKIEKEEPASPVPESPP
PLEKMEKAPQKNTAKNEKPLKPPKPPKPPKPPKVAKPPKVAKPNKTPKAPKPQKEKDGGK
KKGKKMKESPISLPTTPDLEPLDTHTKDTMITAEAPKKGIIPKEEISTPTKEEAPKHNHV
EKCEIREQNKIKTEAKWKYKNSKPDSLLKMEEEHRLQKTLFSANKDNKFKFSFTNKKLFG
SKGIKTQNSPSIFGSLQNFKEDKTKPVRDEYEYVSDDGELKIDEFPIRRKKTTTKRDLSF
LSDNKETPPPPPAKKPKGLESKYKSDDTSDEDSLHIDTEDKPARNSRVKKDSGSSAGILD
LLQASKEVGGLDYNANSQPPASPSTQEAIQGMLSMANLPSDSCLQTSWSANQAKNNSISA
QNSKKSGNNKLANKRASKKANKKSITMEDYDEEQDNLEACFKDSDFVYPSLESDEDNPVF
KSRAKKRKCSDDAPYSPTARVAPSIPRQDRPVREGTRVASIETGLAAAAAKLSQQEDQKP
KKKKTSKKKLSPNNTNELSQEGSSPEVSLSGPTDHEYTAGASTFGVAQVNRGPQPMAPGV
FLTQRRPSASSPNNSTAKVSNANGLPQHKYGSPLAKEHGDQIGKRTKKGMATAKQRLGKI
LKIHRNGKLLL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgtactgtctgtgccgcctcccgtacgacgtgtcccgctttatgatcgag
tgtgacgcgtgtaaggactggttccacggcagctgtgtgggagttgaggaagatgaagcc
cccgatattgacatttatcactgtccgaactgtgagaaaacccacggcaaatccaccttg
aaaaagaaaagaaattggaccaaacaggacccaggacagaccacggaggtaaaaccggtg
cagaacggcagccaagtgtttattaaggagctgcgcaatcggaccttccccagcgctgag
gatattgtcaagaaactgaatgggaaccaattaacagtggaattatttgaagaaacgggt
tttacagaaccgatcctggtgccaaagaaggacgcgctgggcatgactgtacctgctgcg
acgttttatgtcagtgatgtggagaattatgttggcccagagagatcagtcgatgtcaca
gacgttactaaacagaaagactgcaagatgaagctcaaagagtttgtggattactattac
agcacaaacaggaaaagagtcttaaatgtcatcaacttagagttctccgacaccagaatg
tccagcttagtggaagcgccggagattgtcaagaagctttcgtgggtggagaaccattgg
ccggacgatgccctcctggctaagccaaaagtgactaaatactgtttgatttgcgtcaag
gacagttacaccgactttcacatagactctgggggggcctccgcctggtaccatgtgctc
aaaggggagaagatcttttatctcattagacctgcgtcggccaatatctcactgtacgag
cgctggcaatcggcttccaaccactgtgaaatgttcttcgcagatcaggtggataaatgc
tacaaatgtgcagtgaaacagggtcagacactctttattccgacaggttggatttatgca
acgctcaccccagtagactgtttggcattttcggggcatttcttgcacagcctgagtgtt
gagatgcagatgagggcgtatgaagtggaaaaacgtctgaaaattgtcagcttgacccag
ttcccaaatttcgagacagcctgttggtatgttggaaggcacttcctagagaagttcaaa
gctctgcacaaagccgggaagcagccagcaacgcatcttgtccaaggggccaaaattctc
aacggagcctttagatcctggactaaaaaaaacgctctgctagaacatgaagatgagctg
ccagaacactttaagccgtcacagctcatcaaggatctcgccaaagaaatccgtctaact
gagaacgcttctaaggttaccaaaacagaagtgagtgccaacattattgcagaaaagaac
aatatagcggagaaaattgaaaaggaggaacctgcctctccggttccggaatcccctcca
cccttggaaaaaatggaaaaagctccccaaaaaaatactgctaaaaacgagaaaccgctc
aagccgccaaagcctccgaaaccgccgaaaccacccaaagtggcgaaacccccaaaagtt
gccaaacccaacaagacccccaaggcaccaaagcctcagaaggaaaaggacggggggaag
aagaaaggaaagaagatgaaggaaagccccatctcgctccctacgaccccagatctagag
cctctagatacccacacaaaagatactatgattacagcagaagcaccaaagaaagggata
atacctaaagaagagatcagcacccccacaaaggaggaagcccccaagcacaaccatgtg
gagaaatgtgaaatccgggagcagaacaagatcaagactgaagccaagtggaaatacaag
aacagcaagccggattcattactgaaaatggaggaagagcatcgattgcagaaaacacta
ttttcagcaaataaagacaataaattcaagttctcgttcaccaataagaaattgtttggg
tccaaagggatcaagacccagaatagtcccagtatttttggatctctgcagaactttaaa
gaagacaaaaccaaaccagtcagggacgaatatgaatatgtatcggatgacggagagttg
aagattgatgagtttcccatcagacgaaagaaaacgaccacaaagagagacttgtccttt
ttgtcagataacaaggagactcctcctccacctccagcaaagaaacccaagggcctggaa
tcaaaatataagagtgatgatacatccgatgaagactcccttcacatagacacagaggac
aaaccagcgcggaattccagagtcaaaaaggacagcgggagctcagctgggatattagat
ctgctacaggcaagcaaggaagttggtggtttggattataacgcaaacagccaaccccca
gcatctccgagcacgcaggaagcgatccagggaatgctatcaatggccaatctgccctca
gattcctgcctacagacctcctggagtgcaaaccaagccaagaataattccatatcagca
cagaattccaagaagtcgggcaacaacaagcttgcaaacaaacgagccagcaagaaagcc
aacaagaagagcattacaatggaagactatgacgaggagcaggataacttggaggcgtgt
tttaaagattctgattttgtttacccttctctagaatcagatgaagataatccagtgttc
aaatctcgagcaaagaagcgaaagtgttctgacgatgccccttatagccccacagccaga
gtcgctccttcgataccccgacaagacagacctgtccgagaaggtacgagagtggcatct
attgaaacaggcctggcagccgcggcggcaaaactgtctcagcaggaggatcaaaagccc
aagaagaaaaagacttccaaaaagaagctgtcgcccaacaacacaaatgagctttctcag
gaaggcagctcaccggaggtctcactgagtggccccacagaccacgagtacacggccggt
gcaagcacatttggtgtggcccaagtaaacagaggccctcagccaatggcccccggggtc
ttcctcacacaaaggagaccgtcagcatcctccccgaataactcaactgccaaagtttct
aatgctaacggactaccgcagcacaaatatggcagccctctcgcaaaggaacatggggat
cagataggaaaacgtacaaaaaaaggcatggccacggcaaaacagaggcttgggaagatt
ctgaaaatccatcggaacgggaaacttctcctttag
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