KEGG   Xenopus laevis (African clawed frog): 108704176
Entry
108704176         CDS       T01010                                 
Symbol
atxn2l.S
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108704176 (atxn2l.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108704176 (atxn2l.S)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 108704176
NCBI-ProteinID: XP_041435140
Xenbase: XB-GENE-17333020
UniProt: A0A8J1M285
LinkDB
Position
9_10S:117034132..117056459
AA seq 946 aa
MLKQQQAPPSRKPAMAPAQQQGSPGSPNGNLPPGGSRSQDRPGAGRGRNIVKGLQPPVFE
GVYNNSRMLHFLTAVVGSTCDVRVRNGSVYEGIFKTLSSKFELAVDAVHKKTSEQVVGPK
REDIVDTMIFKPSDVAVVRFRNVDFNYATKDKFTDSAIATSSKLNGEHKDKILLRWDGGE
GGNDDYDLDSDMSNGWDPNDMFKFNEDNYGVKTTYDSSLSSYTVPLEKDNTEEFRQREAR
ATQLAREIESSPQYRARISIENDECRTEEEKHSSVQRPNSDRDSPSLANRDGKYIPLPQR
VREGARGGGIRSSSSRGGRQVMSSMPVRGAPQHYPESSCSPEQRGMNGGPSRMSPKAQRP
IRCTKTVSSPSSRPMEVPTSPSSAAPRAYPPLSPKSGSSLSCADSSLGTSIPDPSVAPKP
SSPNSSTPIMPGEGKDIAPPAAVKEQSRTPEQLTPCQVPKQPGKVLHTDHKRNQLDELRK
FGAEFRLQPSSGPDPVSESLPPRQSLECKVPEPTACEGAEPLDIQKVPELVEEMKEERSC
EVAERQEDSGSPPGKAESEEKEGQAVCDQVKKSTLNPNAKEFNPSKPLLSVNKATSTPTS
PGPRNHSSTATIPMLSAGQTGMYGPYISYIPNIHMSSAVQAPQMYPYPMSSSVPGQQGKY
RPKGSLPQRSDQPNSAPPIMQAAAAAGPPLVAATPYSPYISYSPQQFPGQPTMMQPMAHY
PSQPMFAPMLQSNPRMITSGNHPQALVSSSNHQYPPPEQQTPQTLYAAVHQSYSHHAAQL
HPQPASTPTQSQQQPQHANPSPVQHQTGQPPHMSSGQPQQNLYHTATLTATPPSLTPGPS
AQSPQSSYPQQAVYAIHAHQQLQHSYTNMSHVAQAHVQTGISGAHPGAPHPPHPAQVMLL
HPPQSHGGPPQAAIQQTSSPSQYTYIGHHQVQSHPPQQLPFHPPGN
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgctgaagcagcaacaggctcctcccagccgcaaaccggccatggccccggcccagcaa
caaggatcccccggcagccccaacgggaacctcccaccgggcgggagcaggagccaagac
cgacccggagccggcaggggacggaatatagtgaaaggacttcagcccccggtgtttgaa
ggggtttataacaattcccgaatgttgcacttcctgactgccgtcgtgggctccacgtgt
gatgtgagggtgagaaatggcagtgtttatgaggggatctttaaaaccttgagctcaaag
tttgaattggcagttgatgccgtacacaagaaaaccagtgagcaagttgtggggccaaaa
cgagaggatattgtagatacaatgatcttcaagccttcagacgtggctgtggtccgcttc
cgaaatgttgattttaattatgctacgaaagataaattcactgattcagcgattgccacg
agttccaagttgaacggggagcacaaagataagattctcctgcgctgggatggaggggag
ggaggcaacgacgactatgacctggattcagatatgtccaatggttgggaccctaatgac
atgttcaagtttaatgaggataactacggagttaaaacaacgtatgacagcagcctctcc
tcctacacggttccactggagaaagacaacacggaggagttcaggcagcgggaagctcgg
gctactcagttggcacgagagatagaatccagcccccagtatcgtgcccgcatctccatt
gagaacgacgagtgcaggacagaggaggaaaagcacagctcagtgcagaggccaaactct
gaccgggactcccctagtcttgccaatcgtgatggaaagtacatcccactaccccagcgg
gtgcgagaaggtgcacgaggggggggcattaggagcagctccagccgaggggggagacaa
gtgatgagctcaatgcctgtccggggggccccccagcattacccagaaagcagttgtagc
ccggagcagagaggaatgaatggaggtccttctcgcatgtcccccaaagctcagcgcccc
attcgttgcaccaagactgtgtcctccccatccagtcgccccatggaagtgcccacctct
ccctcctctgcagccccccgcgcttaccccccgctgtcccccaagtctggatcgtcgctg
agctgcgcagactcttcattaggaacctccattccagacccctctgtggcccctaaacct
tcctctccaaacagcagcacccccataatgccaggggaaggcaaggacattgcacccccc
gctgcagtgaaagagcagagccgcaccccagagcaactcaccccctgccaagtgcccaag
cagcccggtaaagtgctgcacactgatcacaagaggaaccagctcgatgagctgcgcaag
tttggcgccgagttccggctacagcctagttcgggcccagaccccgtctctgaatcgttg
cccccgcgccagtccttggaatgtaaagtccctgagccgacggcctgtgaaggagctgaa
ccactggacatccagaaagtcccagagttggtggaagagatgaaggaggagagaagttgt
gaggtagccgagcgtcaggaggacagtggcagccccccagggaaggcggagtcagaggag
aaggaggggcaggcagtgtgcgatcaagtcaagaaatccactctgaaccccaatgctaaa
gagtttaacccttccaagcctcttctgtcagtgaacaaagccacaagcaccccaacatca
cccgggccccgaaaccattcttctactgccaccatcccaatgctgagtgccggtcagact
ggaatgtatgggccgtacatctcgtacatcccaaatatacacatgagctccgctgtgcag
gctcctcagatgtacccgtaccccatgtccagctctgtgcccggccagcagggcaaatac
aggcctaaaggttccctcccccagcgctcagaccagcccaactcggctcctcccatcatg
caggcggcagctgctgcggggccccctttagtggcggctacaccgtactccccctatatc
tcttatagcccccagcagtttcctgggcaaccaaccatgatgcagcccatggcccattac
ccctcccagccgatgtttgcccccatgctgcagagtaacccacgcatgatcacatctgga
aaccacccccaggccttggtatcatcgtccaatcatcagtacccccctccagaacaacag
acaccccagaccctatatgccgctgttcaccagtcctactcccatcatgcagctcagcta
cacccccagcctgccagtacccctactcagagccagcagcagccacagcatgccaacccc
agccctgtacagcaccagacgggccagcccccccacatgagcagcgggcagcctcaacag
aacctttaccacacagccaccctgacggcgaccccaccctctctgacccccggccccagt
gctcagtcaccccagagcagttacccacaacaggctgtgtatgccatccatgcccaccag
cagctccagcacagctacaccaatatgtctcatgttgcacaggcacatgtacagactgga
attagtggggctcatccaggagccccccatcctccccaccctgcgcaggtcatgctgctt
caccctcctcagagccacgggggacccccacaagctgccattcaacagacatccagcccc
tcccaatacacctatataggacatcatcaagttcagtcccatccgccccaacaacttcca
ttccacccccccggcaactga

DBGET integrated database retrieval system