Xenopus laevis (African clawed frog): 108704343
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Entry
108704343 CDS
T01010
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108704343
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Others
Others
108704343
Endosome - Golgi transport
108704343
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
108704343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
Laminin_G_3
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WDR55
WD40_WDHD1_1st
Beta-prop_EML
WDR90_beta-prop_4th
TPR_TTI1_C
SUKH_6
NopRA1
Motif
Other DBs
NCBI-GeneID:
108704343
NCBI-ProteinID:
XP_041435484
UniProt:
A0A8J1M1C3
LinkDB
All DBs
Position
1S:45268208..45637959
Genome browser
AA seq
2816 aa
AA seq
DB search
MAAQEKQVHPTGEEKSGKAEGPDPGGALALGPSVPIRGIRMKFAVLSGLLEVGEVSTRDL
VDTVFNLLVGGQFDLEMNFIIQDAESIICMIELLDKCDVTCQAEIWSIFSAILKKSIRNL
LICTEVGLVEHVLKRIDKVDSIIADLLVEMLGILASYSITVRELKLFFSKLQGEKGQWPP
QAAKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPVAKWPYQNGFTFHTWLRMDPINNM
NVDKAKPYLYCFRTSKGLGYSAHFVGSCLIVTSVKSKGKGFQHCVKHDFKPQKWYMVSLV
HIYNRWKNSELRCYVNGELASYGEITWLVNTSDTFDKCFLGSSETADANRVFCGQMAAVY
LFSEALNAAQIFAVYQLGPGYKGTFKFKSESDLFLAEHHKMLLYDGKLSSSIALTYNPRA
TDAQLCLESSPKDNPSIFVHSPHALMLQDVKAILTQSIQSAMHSIGGVQVLFPLFAQLDF
QQYGSDLVDTSVCSTLFAFILELLKNSLAMQEQMLSSKGFLVIGHNLEKSSKSHVTRTVL
ELSLAFAKYLSSLHNGVPLLKQLCDHILLNPAIWIHTPAMVQLALYTFMSTEFISSVSIY
NAVRRTGTVLLVMHTLKYYYWTVNPQDCSGVSPKGLDGPRPNPKEILSLRAMLLIFMKQL
VMKDHGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPASVIPAFDQRNGLRIVY
KLLASKSEGIRVQALKVLGYFLKHLSPKRKTEVMQAHGLFSLLAERLMLQTNLITMTTYN
VLFEILIEQICTQVIHKQHPDPDSTVKIQNPLILKVIATLLRNSPQCSEVVEVKRVFLSD
MIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNTEEQKITEMVYAIFRILLYHAVKYE
WGGWRVWVDTISITHSKVTFEMHKERLAQVFSEYEDRDGDEICPSPSSPIRTIAGISTGL
ESRTQTPPLDITEAVSTSTENAMTESATDHEVTSSNELISSPKTEQMEPDESDDYVEVTL
DPNMSDVEESAKEESSKVEESVPSDLAEDFEEATLSLDTNSCDFVPIGCSDDKEDSSDML
ESKMNVGSSTTVLESSGSAPDNLMPMASENSALSDELSGKLNDAPDSNKVISKLGENKDD
RPHSADPQDQKIDGKINSYSESATSNISEASPALNEVEETQNVDTDAAVGNITSPKESEI
KTNVFAASHVSERKIAKLDVSSIASDTENLDYRHSVSHDVDQTTGAMSETIRQPAGADSQ
RRDSRSTMFRIPEFRWSTMHQRLLTDLLFSIETDIQMWRSHSTKTIMDFVNSNDNVIFVH
NTIHLISQITDNMIMACGGILPLLSAATSATHELEHIEPTQGLSIETSVSFLQRALSLVD
VLIFASSLGFADIEAEKNMSSGGILRQSLRLVCAVAVRNCLECQQHLKLKSTGEHIKNQK
AVHSLVGTGKPAAKSPIDLITGGISPMRDHDRLLQDMDINRLRAVVFRDAEDSKQPQFLA
LAVVYFISVLMVSKYRDILEPQNERKQSARIPKDAENENGDVRSSDAPSLPPASTTDVQN
ALSVRRDSGIGEESAIAPTRTSDDSAEVPTRSSDAVSETGPEPVRSGPDAISEVLHTLSS
EVIKSSHESGSEGLCDQASAKNVNVKDILRSLVNLPSDEPLTDPALLPNFLGTLGDPAAA
KPVQFRSFDRSVVIAQKKSGPPLPATVSTAPHAVSVVSSADSSQTADADRESSGSGSSNS
KLPSVQTVASVPEDSASHMSITERLEHTLEKAAPLLREIFVDFAPFLSRTLLGSHGQELL
IEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRV
ANEAEFILSRQRAEEIHRHAEFESQCAQYTADKREEEKMCDHLIRAAKYRDHVTATQLVQ
KIINILTDKHGAWGCSSISLPREFWRLDYWEDDLRRRRRFVRNPLGSIHPEATLKSAIEH
DSDEDTLVKGKQSIKGQVVGGQMSEAESLLDGEDDTMSSLEEKDLESLTGPVNLSTPAQL
VAPSVVLKGTLSVTSSELYFEVEEDDPAFKKMDPKILAYTEGLHGKWLFTEIRAVFSRRY
LLQSTAVEIFMANRVSVMFNFPDQSTVKKVVHCLPRVGIGTNFGLPQTRRISLATPKQIF
KASNMTQRWQHREISNFEYLMFLNTIAGRSYSDLNQYPVFPWVINNYESEQLDLTLPSNF
RDLSKPIGALNPKRADFFDERYKTWEDDQVPKFHYGTHYSTASFVLSWLLRIEPFTTFFL
NLQGGKFDHADRTFSSVARAWRNCQRDTSDIKELIPEFYYLPEMFVNANNYNLGVMDDGT
VVSDVDLPPWAKSPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYY
LTYEGAVNLSSINDPVLREGVEAQIRSFGQTPSQLLIEPHPPRSSAMQVTPLMFTDQAQH
DVIMVLKFPSNSPVTHVAANTQPGLTSPGVITVTANRLFAVNKWHGLPAHQGAVQDQPYQ
LPLEIDPLIASNTGMHRRQISDLLDQSIQVHSQCFVITADNRFILVCGFWDKSFRVYSTD
TGKLTQVVFGHWDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKSNGIGDNPSTEF
ATPRALLTGHDCAITCAAVCAELGLVISGSDGPCLIHSMNGDLLRTLEAAENCLRPKLIQ
VSREGHCVVYYEKGMLCVFSINGKLQASIKIEDNNRAILLSRDGQYLLTGGDNGVVMVWQ
VSDLKQLFAYPGCDAGIRSMAMSFDQRCIMTGMGSGSIVLFYNDFNRWHHEYQTRY
NT seq
8451 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggagaagcaggtgcacccaacaggtgaagagaagagcggcaaggctgag
ggcccggacccaggaggagcgctggcgctaggaccgagcgtacccattcgagggatccgc
atgaagtttgcggtgctgagcggattgctggaggtcggggaagtcagcaccagggacttg
gtggacaccgtgttcaatttgcttgtgggaggccagtttgatctggagatgaatttcatt
atccaagacgcagaaagcataatctgcatgatagaactgctggacaaatgtgatgttacg
tgtcaagcagaaatatggagcattttttctgccatcctgaagaagagcattcggaatttg
ttgatctgcactgaagtgggtttagttgaacacgttcttaaaagaattgataaagttgac
agtataattgcagatctcttggtggaaatgctggggattttggccagctacagcattaca
gttcgagaacttaaactttttttcagcaaactgcaaggagaaaaaggacagtggcctcct
caagcagcaaaattgctgtcagtcttaaagcacatgcctcagaaatatggtcccgatgcc
ttttttaactttccagggaaaagtgccgcagccattgccttacctccagtggctaaatgg
ccatatcaaaatggcttcacatttcatacttggttaaggatggatccaataaacaacatg
aatgtggacaaagctaaaccttatttatattgtttcagaacaagtaaaggacttggttat
tcagctcattttgttggcagctgcttaattgtcacatcagtaaagtccaaaggaaaagga
ttccagcactgcgtgaagcatgatttcaagccacagaagtggtatatggtatcacttgtc
cacatttacaaccgatggaaaaacagtgagctgagatgttacgtaaatggagaattggct
tcctatggagagataacatggcttgttaatacaagtgatacatttgacaagtgcttccta
gggtcatctgagacagctgatgctaatagagtgttctgcgggcagatggctgctgtctac
ctatttagtgaagctctaaatgctgctcagatatttgcagtctatcagctgggccctgga
tacaagggaacatttaaattcaagtcagaaagtgatctctttcttgcagagcaccacaag
atgttgctgtatgatggcaaattgtcaagctcaattgctttgacgtataacccaagagct
actgatgcccagctttgcctggaatcctctcccaaagataacccatctatctttgttcat
tccccacatgcgcttatgctgcaggatgtgaaagccattttaacccaatcaattcaaagt
gcaatgcactcaataggaggagtgcaggttctctttcctctgttcgctcaactggatttt
cagcaatacgggtcagatcttgtagacacgtcagtctgttctactctttttgccttcata
ttggagttgctgaaaaactcccttgctatgcaagaacagatgctttcttcaaagggcttc
cttgtgataggacataatcttgaaaagtcttccaaatctcatgttacaagaacagtcttg
gaactcagtctggcctttgcaaaatacttgagtagcttgcacaatggggttcctttactc
aagcagttgtgtgaccatattctgcttaacccagcaatatggattcataccccagccatg
gttcagttggctttgtacacattcatgtctacagagttcatcagctcagttagcatctac
aatgctgtccgtagaactggcactgttctcttggtgatgcacaccttaaagtattactat
tggactgttaaccctcaagattgtagtggcgtcagtcccaaaggcttggatggaccacga
cctaatccaaaagaaatactgtctcttcgagcaatgctgttgatatttatgaaacaattg
gtcatgaaggatcatggcataaaagaagatgaattgcaggcaattctaaattatctgctg
acaatccatgaagatgacaacttaatggatgttctgcagcttcttgttgcattgatgtct
gaacaccctgcctcagtgattcctgcatttgatcaacgaaatgggctacggattgtttac
aagctcctggcatccaagagtgaaggaataagggttcaagctttaaaagtcttgggttac
tttttgaagcacttatctccaaagagaaaaactgaagtcatgcaggcgcatggactcttc
tctctactagctgaaagactgatgttgcagacaaacctcataacgatgacaacctacaat
gtgttgtttgagattctcatagaacagatatgtacccaggtcatacataaacaacatccc
gatccagattcaacagtcaagatacaaaatcccttgatactaaaagttatagcgactctc
ctgcggaactctcctcagtgctcagaagtcgtggaagtaaaaagagtgtttctttctgac
atgatcaagctttttaataacagccgggaaaatcgaaggagcttgctacagtgctctgtc
tggcaggagtggatgctgtccctctgctactttaaccctaagaacacagaggagcagaaa
attacagaaatggtgtatgccatctttcgaattcttctctatcatgcagtcaaatatgag
tggggaggttggcgtgtttgggtggatacaatctcaattactcattcaaaggttactttt
gagatgcacaaagaaaggttggcacaggtttttagtgaatatgaagacagagatggtgat
gaaatatgccctagtccttcaagccccataagaacaattgctggaatcagcacaggctta
gagtccaggactcagaccccacctttggatatcacagaagctgtaagtacttctacagaa
aatgctatgactgaaagtgcaacagaccatgaagttacatcatccaatgagcttattagc
tcaccaaaaactgaacaaatggaaccagatgagagtgacgattatgttgaggttaccctt
gatccaaatatgtctgatgtggaagagagtgcaaaagaagaatcctctaaagttgaagag
tctgtgccttcagatttggctgaagattttgaggaagccaccttatcacttgataccaac
tcttgtgattttgtaccaattgggtgctcagatgacaaagaagacagttcggatatgctg
gaaagtaagatgaatgtgggcagttctaccactgtgttggaaagttcagggtctgcacca
gacaacttaatgccaatggcatcagaaaattctgctttatcagacgaattatcagggaag
ttaaatgatgcaccagatagcaataaggttatttccaaattaggggaaaataaagatgat
agaccacattctgcagacccccaggaccagaaaattgatggaaaaattaattcttattct
gagagtgccacttccaatatttcagaggcaagtcccgctttaaatgaagttgaggaaact
caaaatgtggatacagacgcagcagtgggaaatattaccagtccaaaagaaagtgaaata
aaaacaaatgtttttgctgcttctcatgtgtctgaaagaaaaatagcaaagcttgatgtt
tctagcattgcttcagatacagaaaatctggattacaggcacagtgtgagccatgatgtt
gaccagaccacaggagccatgtctgagacaatacggcagcctgctggagcggatagccaa
aggagagattctagaagcacaatgtttcgtattcctgaattcaggtggtcaactatgcat
cagcggttgctcacagaccttctgttttcaatagaaacagatatacagatgtggcgaagc
cattctaccaagactataatggactttgtgaatagcaatgataatgttatttttgttcac
aacactatccacctgatttctcaaataacagacaacatgatcatggcttgtgggggtata
ttaccgttgctgtctgctgcaacttcagctacacacgagctagaacatattgagccaaca
caaggcctatcgatagagacatccgtttcttttctacaacgtgctcttagcctagtcgat
gtgcttatttttgcaagttctttgggctttgcagatattgaagcagagaagaacatgtct
tccggaggaatactgaggcagtctcttcgattggtctgtgctgtagctgtaagaaattgt
ctggagtgtcagcagcacttgaagttaaaatccacaggagaacacataaaaaaccagaaa
gcagttcatagcctggtgggaacaggaaagcctgctgcaaagagccccattgatctaatt
acaggaggaatttctcccatgcgagaccatgaccgccttctacaagacatggatataaac
cgtttaagagctgttgtcttcagagatgcagaggacagcaaacagcctcaatttcttgca
ctggctgtggtttacttcatttcagttttaatggtatctaaatatcgagatatccttgag
cctcaaaatgagaggaagcaatccgctagaattcctaaggatgctgaaaatgaaaatggt
gatgtgagatcttcagatgctccctctttaccaccagctagtactacagatgtccaaaat
gccttgtctgtaagaagggactctggcattggcgaagaatctgctatagcccctaccaga
acttctgatgactctgctgaagtccctacaaggagttctgatgcagtgtctgaaacaggc
ccagagcctgttcgttcaggaccagatgctatcagtgaagtactacacaccctgtcctca
gaagttataaaatcctctcacgagagtggaagtgaaggactgtgtgatcaagcatctgca
aaaaatgttaatgtgaaggacattctcaggagtctggtgaacttaccatctgatgagccc
ctgacagaccctgcgttattgccaaacttccttggaacacttggtgatcctgcagctgcg
aaaccagtacagttcagatcatttgacaggagtgttgttatagctcagaagaaatcaggt
cccccattgccagcaactgtcagtacggctccacatgcagttagtgtggtgtcatcggct
gattcttcacaaacagcagatgctgacagagaatcctctggcagtgggtcatcaaattca
aagttaccttctgttcagacagtcgcttctgtgccagaggactctgcttcacatatgagc
attacagagagattggagcacactctggaaaaggctgctccactcctgagggagatattt
gtggattttgctccttttctgtctcgcacacttttgggaagccatggccaagaattgcta
attgaaggaacaagtctggtttgtatgaaatcaagcagctctgtagtggaacttgtcatg
ctgctgtgttcacaggaatggcagaactctattcagaagaatgcagggctggctttcatt
gaattggttaatgaaggaaggttgttaagccaaactatgaaagatcacctggtgagagtg
gcaaatgaagctgaatttatcttgagcaggcagcgagcagaggagatacacagacatgca
gaattcgagtcccagtgtgcacagtatactgcagacaagagagaggaagaaaaaatgtgt
gaccatttaataagagcagctaagtacagagatcatgtaactgcaacgcagcttgtacag
aaaattatcaatattctcacagacaagcatggagcatggggttgctcttcaataagtctt
cctcgtgagttctggcgccttgactactgggaagatgacttgaggcgccgacgacgattt
gtgcggaacccccttggatcgatacatcctgaagcaaccctcaaatcagccatagagcac
gattctgatgaagatacacttgtgaaaggaaagcagtctatcaaaggtcaggttgttgga
ggacaaatgtctgaggctgaaagccttctggatggagaggatgacaccatgtcatcctta
gaagagaaagatcttgaaagcctcacaggtcctgttaaccttagcacccctgcgcaatta
gtggctccttccgtggtgctaaagggcaccctctctgtcacctcctctgagctctacttc
gaggtggaagaagatgatcctgcatttaagaaaatggaccccaagatccttgcctacact
gaaggattgcatggaaaatggcttttcacagagatccgtgccgttttttcacgtcgatac
ctgctgcaaagcacagctgtagaaatttttatggcaaatagagtttcagttatgtttaac
ttccctgaccagtctactgtaaaaaaagttgtccattgcctccccagagttggtattggc
actaactttggattgcctcaaacaaggcgcatctctttggctactccaaaacagatattt
aaagcatcaaatatgacgcagcgttggcagcacagagaaatctccaattttgaatattta
atgtttctgaacacaatagctggccgtagttacagcgacttgaaccagtatccagtgttc
ccctgggttataaacaattatgaatcagaacagcttgatcttactcttcctagcaacttt
agggatttgtctaagcctattggagcactgaacccaaagcgagctgacttctttgatgaa
cgttataaaacctgggaagatgaccaagtacccaaatttcattatggcacacattattca
actgcaagttttgtacttagctggctactgagaattgagccattcacaacattttttctg
aatttgcaaggtggtaaatttgaccacgcagaccgaactttttcatccgttgcaagggca
tggagaaactgtcagcgggacacttctgatatcaaggaactcattcctgaattctactac
cttcctgagatgtttgtgaacgccaataattacaatcttggagtgatggatgatggcacc
gtagtatctgatgttgatcttccaccatgggctaaatccccagaagagtttgttcgcata
aacagactggccttggaaagtgaatttgtttcctgccagctgcaccaatggattgacctt
atatttggctacaaacagcaagggccagaagccgtaagagctttaaatgtgttctactac
ctgacatatgaaggggctgtcaatctcagttcaattaacgatcctgttttgagagaggga
gtggaagctcaaattcggagttttggacaaaccccttctcagcttttaattgagccacat
cctcccaggagttcagccatgcaggtgactcccctgatgtttacagaccaagctcaacac
gatgtgatcatggtactgaagttcccatccaactctccagtcactcatgttgctgccaac
acccagcctgggctgactagtcctggagtaattactgtcactgcaaacagactgtttgcg
gtaaataaatggcatggtctccctgctcatcaaggtgctgtgcaggaccagccataccag
ctgcccttggaaatcgatcctcttatagccagcaatactgggatgcacaggaggcaaatc
tctgaccttttagaccaaagcatccaggtccactcacagtgttttgtcatcacagctgac
aatcgctttattcttgtctgtggcttctgggacaaaagctttcgtgtttattcaacggac
acaggtaaattgactcaggtggtgtttggtcactgggatgttgtaacctgcttagcacgt
tctgagtcatacattggaggagattgctatgtgctgtctggatcaagagatgccactttg
ctactgtggtactggaatggcaaaagcaacggcattggagataatcccagcactgaattt
gctactcctcgggccttactaacaggacatgactgtgcaattacctgtgctgctgtatgt
gcagagcttggcctagtgatcagtggttcagatggtccgtgtttgatacattctatgaat
ggagaccttttaaggaccttggaagctgcagaaaactgcttaagaccaaaacttatacag
gtttcaagagaaggtcactgtgttgtctattatgaaaaaggcatgctctgcgtttttagc
atcaatggaaaacttcaagcttcaataaaaattgaagacaataaccgggccattctgctt
agccgggatgggcagtacctactgactggaggagacaatggagttgtcatggtgtggcaa
gtatccgatctcaagcagctctttgcttacccaggctgtgatgcagggattcgatccatg
gccatgtcttttgaccaaaggtgcataatgacaggcatgggctctggaagcatcgtgctc
ttctacaatgacttcaatcgctggcaccatgaatatcagacaagatactga
DBGET
integrated database retrieval system
