Xenopus laevis (African clawed frog): 108704369
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Entry
108704369 CDS
T01010
Symbol
trim24.L
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xla01001
]
108704369 (trim24.L)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108704369 (trim24.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108704369 (trim24.L)
Protein kinases [BR:
xla01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
108704369 (trim24.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108704369 (trim24.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
108704369
NCBI-ProteinID:
XP_018096363
Xenbase:
XB-GENE-17346660
UniProt:
A0A8J0U772
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Position
3L:6797221..6849235
Genome browser
AA seq
1082 aa
AA seq
DB search
MEGPVDKEAPAFTQPPPPPPLPQPPPLSSSSAENEAESRQGPEESSGERAALNSLETCGF
CRQHIQSRSPRLLPCLHSLCQRCLPPPERYLSMSAPGPPQPPNPGTPAATVQVGVIRCPV
CSQECAERDIIENFFVRDTTEVPSSTVEKPSQQVCTSCEDNAEARGFCVECVEWLCKNCV
QAHQRVKFTKDHTVRQKEEVPPDGFSSEAVGANSQRPVFCPFHKKEQLKLYCETCDKLTC
RDCQLQEHKEHRYQFIEEAFQSQKVIIDTLIAKLMEKNKYIKFTGDQIQNRILEVNQNQK
QVEQDIKVAVFTLMVEINKKGKALLHQLEALAKDRRMKLLKQQHEVDGFSKQLEHVVYFS
KWAVNSGNSTALLYSKRLITYRLRHLLRARCDVTPVTNTVQFHCDANSWAQNIFNLGSLV
IEEGDPSQQTTPMEVQNTQGTKPGNQLSKFPTQISLAQLRIQHMHQQIMAQRQQAQRRPG
PVGLPNPSVPPQPMVLNNPRVPMQHQQPPNQMQRFVNVQNMNPRPNGMVMPNQPMRYPHN
VPNAVDLQNMQHSQNMQHSQNMQHSQNMQHSQNMQHSQNMQHSQNMQHSQNMPRRPGPVG
HPPIRVTFMPHHGMKQWQVSGSPTAAHSATSSNTATPSSPTITSVAGSDGKGMSSPVIDL
VTSAANSFNLPPIPDIDSTANVLLDTLIRKDANLDNANHYRMLSHRTVQSPNSSVPSPLG
SMAGVHPPIRTSSASSIGSRESSGSSSKPTGGADSTHKMPVVRLEPIRIKSDNTPENFEY
PVVVVKQENRHRSQPRNAEYPGSILTSMLLDSNGNRRSKSDAGSRRDAPDSTGDRHLTRD
GSNEWMPQSRASEGGKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLINFPSGE
WICTFCRDLSRPEVEYDCDDPSLAEQRKLGGAQSMTPIDQRKCERILLYLFCHEMSLAFQ
EPVPLTVPDYYRIIKKPMDLSAIKRKLQFNGAPHYTRPEEFVGDVRLIFKNCLEFNEPDS
EVASAGIKLEAYFEELLLNIYRDQKFAKTNYREETAASGDSDDEFVAPRKKRFKGEERLF
FK
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggagggccctgtggacaaagaggctccggccttcacgcaaccgccgcctcctccgcct
ctccctcagccgcccccgctctcctcttctagtgccgaaaatgaggcggagagccggcag
ggcccggaggagagcagcggagagagggccgcgctcaattcgctggagacgtgcggtttc
tgcagacagcatatccagagccgcagcccccgactgctcccgtgtctccactccctgtgt
cagcgctgcctccccccgcccgagcggtacttgagtatgtctgccccggggcccccgcag
ccccccaaccctggcacccccgcggccaccgtacaagttggggtgattcgctgtcccgta
tgcagtcaggagtgcgcagaaagagacatcattgagaactttttcgtccgtgacaccacc
gaggttcccagcagtaccgttgagaagccaagtcagcaagtctgtacgagctgcgaggac
aacgcagaggcgcgaggcttttgtgtggagtgcgtggagtggctgtgcaagaactgcgtg
caggcccatcagagagtgaagttcaccaaggaccacactgtgcgacagaaggaagaagtc
ccgcctgatggtttctcctctgaagcggttggtgcaaatagccagcgtcctgtcttctgc
cctttccacaagaaggagcaactgaaactgtactgtgagacctgcgacaaactgacatgc
agggactgtcagcttcaggagcacaaagaacacaggtatcagtttatagaagaagcattt
cagagccagaaagtcataatcgacacattgattgcaaaattgatggagaagaacaagtac
attaaatttacaggagaccaaatccaaaaccgaatcctcgaagttaatcagaaccagaag
caggtggagcaggatattaaagttgctgtttttacgctaatggtagagatcaacaaaaaa
ggcaaagccttactgcatcaactggaggctttggctaaggatcggcgcatgaagcttctg
aaacagcaacacgaagtcgacggtttctccaagcagctggagcacgtggtttatttctcc
aaatgggcagttaacagcggcaacagcacagctttactttacagcaagcgcttaatcact
tatcgcttaaggcacttgctgcgggccaggtgtgatgtcactccagtaaccaacactgtt
cagtttcactgtgatgccaattcgtgggctcagaatatatttaacctaggttctctggtc
attgaagagggtgacccctctcagcaaacgactcctatggaagttcagaatactcaggga
accaaaccaggcaaccagctgtccaaattccccacccaaatcagcttggcacagctccga
atccagcacatgcaccagcagattatggcccagcggcagcaagcacagcgacggccaggt
ccagtggggctgcctaatccctccgtacctccacagccaatggtccttaataatcccaga
gtccccatgcagcaccaacagcctcctaaccagatgcaacgttttgtgaatgttcagaat
atgaacccgaggccgaatggtatggtgatgcccaatcagcccatgcgctaccctcacaac
gttccgaatgcagtggatcttcagaacatgcagcacagtcagaacatgcagcacagtcag
aacatgcagcacagtcagaacatgcagcacagtcagaacatgcagcacagtcagaacatg
cagcacagtcagaacatgcagcacagtcagaacatgccgaggagaccagggcccgttggg
catcctccaatcagagtcacttttatgccccatcatggcatgaaacagtggcaggtttct
ggaagcccaacggcggcccattctgcgaccagtagcaacaccgccactccatctagtcct
acgatcaccagtgtcgcagggagcgatggcaagggaatgtcttctccagtgatcgacttg
gttacctccgctgccaactcgttcaacctcccgcctattcctgacattgacagcaccgct
aatgttttactggacactttgattaggaaggatgcaaatctggataatgccaaccactac
aggatgttgtctcatcgaactgttcagtcacctaattcctctgtaccctcaccattagga
tccatggctggagttcacccaccaatacgcacatcaagcgcctctagtatcggaagcaga
gaaagctctggctcctccagcaaaccaacaggcggtgctgactcaacacataaaatgcct
gtggttagacttgagcctatcagaatcaagtcagacaacactccagagaactttgagtac
cctgtggttgtggtcaagcaggagaaccgacatcgatctcaacctcgaaatgcagagtat
cctggaagcatcctcacatccatgttactcgacagcaatggtaatcgcagatccaaatcc
gacgcgggctcccgacgagatgctcctgatagcacaggagacaggcacctcacacgagac
ggaagcaatgaatggatgccccagagccgagcgtctgagggtgggaaggaggacgatccc
aatgaagactggtgtgccgtgtgtcagaatggaggggagctgctttgttgtgagaaatgt
cccaaagttttccacctctcgtgccatgtgcctacactgataaactttcccagtggtgag
tggatttgcaccttttgccgagacctatccagaccagaagtggagtatgactgtgatgac
ccatccctggcagagcaaaggaaattaggaggagcccagagcatgacaccgattgatcag
agaaagtgtgagcggattcttttgtatctcttctgccacgagatgagcttggccttccag
gagcctgttcctttgactgtgcctgactactacagaatcattaaaaagcctatggatttg
tcagccattaaaaggaaactccagtttaacggcgctccccactacacacgcccagaggag
tttgtcggcgacgtccgtctgatttttaaaaattgcttagagtttaatgagcctgattcg
gaagtggctagcgccggtatcaaactggaggcctatttcgaggagttgctcctgaacatt
taccgggatcagaaatttgctaaaacgaactacagagaggagacggcagccagcggggac
tcggacgatgaatttgtggcgcctcggaagaaacgcttcaaaggcgaggagcgcctcttt
ttcaaataa
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