Xenopus laevis (African clawed frog): 108704444
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Entry
108704444 CDS
T01010
Name
(RefSeq) chromatin-remodeling ATPase INO80-like isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108704444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108704444
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
108704444
INO80 complex (yeast)
108704444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
108704444
NCBI-ProteinID:
XP_041430298
UniProt:
A0A8J1LL62
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All DBs
Position
8S:complement(89790844..89858736)
Genome browser
AA seq
1545 aa
AA seq
DB search
MASELEATEDGTSTDLAKPLYLQYLERALRLDQFLRQTSAVFNRSVSSDESEDGLDETPL
LPESEDLSLQVKEEPMSPLLGEPCGEGSKDLLPVHACNGVLKPEPKSERGSFYNFSKLKK
SRKWLKNILLSEVSSDTDSLSEEDEGESSLSKEELHDMLRIHKYKKLHQSKYKKDKELHQ
YPYYSAGLLSTHDPFYEQQRHLLGPKKKKIKEEKKFKAKLKKIKRKRRREEDLSEDELPR
RHHHTKVFAKFSQDAPTPVGKKKHLTLEQLNARRRKVWQMIVKKELPKAYKQKVSARNLL
LTNSKKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMSLYWKKYEKVEKEHRKRAEK
EALEQRKLEEEMREAKRQQRKLNFLITQTELYAHFVSHKQESGPDGIQEEILRKLDEGSS
QEQVGVGGSYLSLNHDYDSGYYKSQALKNAEEAFRIHQAQTRAFDEDAKESRAAALRVAI
KSESGFGESYSLANPSIRAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEM
GLGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFSRFVAKFKVLPYWGSPHER
KVIRKFWGQKTLYTQEAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRW
KILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHDEFSEWFSKDIESHAENKS
AIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCSLTTRQKLLYQALKNKISID
DLLQSSMDTAQQAQNTTSSLMNLVMQFRKVCNHSDLFERQETWSPFHFSLRPYQISKFLF
RHGNINCMNWSRNRWLRVLLSPFAPDHIQQSLFHRNGSDKESCFSFLRFFDVCSAEIANL
MLRGHLPRWLALFLSLKAAYRLHHARVWEERSESDSRNSYLTNRSLILWVNFALSFPNLR
SSSTLQELVFTSHCRPIYGFEDYVLQGGKSGQSQVRHCQITQFPSFLYVTSPQVTASPLD
IYCNDRSAEYERREFREGGGPIARQCLMFGAPELYADWPLRHVKFFPASPGGLMAIRPRN
GWSYIRIPDKESLITDSGKLYALDLLLTRLKSHGHRVLIYSQMTRMIDLLEEYMVYRKHT
YMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD
QQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRVVISGGNFKPDTLKPKE
VVSLLLDDEELEKKLRLRQEEKRQQEETNKVKERKRKREKYAEKKKKEDEVDGRRKKEGV
NLVIPFLPSADNSNMSADGEDSFISVDSAMPSPFSEISFSSELHTGSIAPDESSNDMLVI
VDDPSSSAQQSRGTNSPASVTGSENLNGISNQETPKSSRVNSSQNRGRAKAGANSSKGGG
KSRSRKSTAGSAAAIAGAMAGAAAASAAAYAAYGYNVSKGLPASSPLQNSLLRTSGISDC
GPLNTSSPINSPLSKGTPKINNPIGLAPETPTRRHSKAPSTPGGL
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagagctggaagccacagaggatggcacttccacagatctggcaaagcccctc
tacctccagtacttggagcgagccctccgccttgaccagtttctccgacagacctcggca
gttttcaacaggagcgtctccagtgatgagagtgaagatggcttggatgaaacaccccta
cttcctgagtctgaagatctttccttgcaggtgaaagaggagcctatgtcccctctgctt
ggggaaccttgtggagaagggagcaaggatcttctaccagttcatgcatgtaatggagtc
ctgaaaccagagccaaagtcagaaagaggaagcttctataatttttccaaacttaagaaa
agcagaaaatggttgaagaacatcctgcttagtgaggtctctagtgatacagactcttta
agtgaagaggatgagggggagtcctcactatctaaggaagagctgcatgacatgcttaga
atacacaagtacaagaaactgcaccaaagcaaatacaagaaggataaagagctgcatcag
tatccgtactatagtgccgggcttctctccacccacgaccccttttatgaacagcagcgc
cacttactgggccccaaaaagaaaaaaatcaaagaggagaagaaatttaaagccaagtta
aaaaaaattaaaagaaagaggaggagagaggaggatttatctgaggatgagctgccacgc
cgacaccaccataccaaagtgtttgccaaattttcccaagatgccccaacgccagtcgga
aagaaaaaacacttgacattggagcagctgaatgcccgccgcaggaaagtctggcagatg
attgtcaagaaggagttgccaaaggcctacaaacaaaaagtttcagcccgaaatttactg
ctaacaaacagcaaaaagttggctcatcagtgcatgcgggaggtacggcgagctgctatt
caggctcagaagaactgcaaggagactctgcctcgggcgcgaaggctaaccaaggaaatg
tctctgtactggaaaaagtatgagaaggtggagaaggagcatcggaaacgggcagagaaa
gaggctttagagcagcgtaagctagaagaggaaatgagagaggccaagaggcagcagagg
aagctaaatttcctgataacccagacagagctatatgctcactttgttagtcacaagcag
gagtctggtccagatggaatacaggaagagatcctgcgcaagctggatgagggctcatct
caggagcaagttggagtgggaggatcctacctaagcctgaaccatgactatgacagtggc
tattataagtctcaggccttaaaaaatgcagaagaggccttcaggattcatcaagcacag
acaagggcatttgatgaagatgccaaggagagccgtgcagctgccctgcgggtagccatt
aagtcggaatcaggctttggggagagctacagcctggcaaatccttctataagggcggga
gaggacattccgcagcccaccatattcaatggcaaacttaagggttaccagttgaaaggc
atgaactggttggcaaatctatatgaacagggtattaatggcatcttggccgatgagatg
ggattgggtaaaaccgtgcagagcattgccttgctggcacatctagcagagagagagaac
atctggggtcccttcttaatcatttcacctgcttccactctgaacaactggcaccaggaa
ttctccagatttgttgcaaaattcaaggtactcccatattggggcagccctcatgagaga
aaagtaataagaaagttctggggtcagaaaactttatacactcaagaagctcctttccat
gtggttatcacaagctaccagttggtggtgcaggatgtaaagtacttccagcgtgtaaag
tggcaatacatggtgctagatgaggcccaggctcttaagagtagttcaagtgtccgatgg
aagatcctgttgcagtttcagtgtcgaaaccgtctgctgctgactggcacccccattcag
aataccatggctgagttgtgggcactgctgcactttatcatgcccacgctcttcgactcc
catgacgaattcagcgaatggttttccaaggacatagaaagccacgccgagaacaagtct
gctatcgatgaaaatcagctgtctcgattacatatgattctcaaaccttttatgctaaga
agaatcaagaaggatgtagagaacgagctgtccgacaaaatagagatcctgatgtactgc
agtctcaccactcgccagaaacttctctaccaggccctcaagaataagatctccattgat
gacctcctccagtcctccatggacacagcccagcaggcacagaacaccaccagcagtctc
atgaacctagtcatgcagtttcgaaaggtgtgtaaccactcagacctatttgaacgtcaa
gaaacgtggtcccccttccacttttctttaaggccttaccaaatctctaagtttttgttc
aggcatgggaatatcaactgcatgaactggtctcgaaataggtggctacgtgtgctgctt
tcgccttttgcacctgatcacatccaacaatctctcttccatagaaacgggtcagacaaa
gaaagctgcttctctttccttcgattctttgatgtctgttctgcagagatagccaacctc
atgcttcgggggcatctcccaagatggttagctcttttcctgtctctgaaagccgcctac
aggctccaccatgcacgtgtctgggaggagaggagtgagtccgatagccgaaattcctat
ctgaccaacaggagtttaatcctctgggtgaattttgcactctctttccccaaccttcgt
agctcctccacactgcaggaattggtgttcactagccattgtagaccgatctatggtttc
gaggattacgtgctgcaggggggaaaatccggtcaatctcaggttcggcactgtcagatt
acacagttcccatcattcctttatgtcacctcacctcaggttactgcttcaccattggat
atctactgcaatgatcggagcgcagaatatgaacgccgggagttcagagagggtggtggc
cccattgccaggcagtgcttaatgtttggagccccagaactttatgctgattggccacta
aggcacgtaaaattcttccctgccagtcctggtggcttaatggctatcagaccacggaac
ggctggtcctacatcagaatacctgataaggagagtctgatcactgacagcggaaagcta
tatgctcttgacttgctgttgactcggctaaaatcacacggccatcgagtgctcatttac
tcccagatgacgcggatgatcgacttgctggaggagtacatggtgtataggaaacacacg
tacatgaggcttgatggatcctccaaaatttcagaaaggagagacatggtggcagatttc
cagagcagaacggacatttttgtgttcctgctcagcaccagagccggaggactgggaatt
aacctcacagctgctgatacggttattttctatgacagtgactggaacccaacagtggat
cagcaagccatggatcgggctcaccggttgggccagaccaagcaggtgacggtatacagg
ctcatttgtaagggcaccatagaagagagaatactacagagagcaaaggagaagagtgag
atccagcgggtggtgatctctggtggaaactttaagccagacaccctgaaaccaaaagaa
gttgtgagcctgctgctggatgatgaggaactggagaaaaaattgcgtctgaggcaagag
gagaaacggcagcaagaggagaccaacaaagtgaaggagcgcaagagaaagagggagaaa
tatgcagaaaagaagaagaaggaagatgaggtggatgggaggaggaagaaggaaggggtt
aatctggtgattccttttctgccctcagcggataactccaatatgtctgcagatggggaa
gactcatttattagtgttgactctgcaatgccaagtccattcagtgagatttccttcagc
agcgagctccatacaggatccattgctccagatgaaagcagcaacgacatgttggttata
gttgatgatccctcctcctcagcgcagcagtctagaggcaccaattcccctgcttctgtc
actggctctgaaaatctcaacgggatttccaaccaggaaactccaaagagcagccgggtg
aactcgagtcagaacagaggacgtgccaaggccggagcaaacagctcgaaaggaggaggc
aaatcccgaagccgcaaatccactgcaggtagtgccgcagcaattgccggagccatggcg
ggagcagccgccgcttctgctgcagcctatgcggcctacggatacaatgtttccaaaggt
ctcccagccagcagtcccctccaaaactctttgttgcgaacttcagggatctctgactgt
ggcccgctaaacacatcatctcccatcaactctccattaagcaaaggaactcccaaaatc
aacaatcccattggcttagccccagaaactccgacacggagacacagcaaggctcccagt
accccaggaggattatag
DBGET
integrated database retrieval system
