Xenopus laevis (African clawed frog): 108704461
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Entry
108704461 CDS
T01010
Symbol
gle1.L
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
xla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108704461 (gle1.L)
03015 mRNA surveillance pathway
108704461 (gle1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108704461 (gle1.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108704461 (gle1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
TMEM174
SAC9_GBDL_1st
Motif
Other DBs
NCBI-GeneID:
108704461
NCBI-ProteinID:
XP_041429142
Xenbase:
XB-GENE-6486099
UniProt:
A0A8J1LHY4
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Position
8L:complement(10350113..10379230)
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AA seq
691 aa
AA seq
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MSRRDWKTLKALQQSPKAKLRYETEWSLDEEELLERSMALCMLSPHSARVLDNIISPVQR
RTSNTNSLSAQEIGDDDSLKPVSLDSRTDFSDLVIEKPPESHQPSLMKVQTSINLHSERL
AEVEGSIYLYREAERIKMQNQLQKRLEMCVQYEKNFADQAAEQLKRFEEMMELKQRQERD
RLQEQLEAGSKEALGQQEKLKEEHRTRAKLLNRKLREAELQRYQEQERIRQEEGRERKRR
LCDLQQEVLQLVQQIEMDYKHQETLRVDLSTYSQRGNQICGILSSVVRSSEQSGFPTQED
VNIGERFLQEMQALVSAMQQTVSAAEERRKAEEVADREKQKELEKQQQTKAQAPTPAPAQ
TQKQSQKEGLQVKASPCIMKRYQQLQSLLEQTLNDIAPFQDSKDSKVKAVRVELQKAVYI
PVSQISTESASKMKETFEKLNNLLMGKRVSSCGSTVISVSQHPQALNFVYYKLAEKFVKQ
GEQEIASHHEAAFPLAAVASGIWEHHPQVGELFLAHLYKKCPYAVPFYPAHKKGTPIEEY
RRILGYEVEDSQVESQDNFLKRMSGMIRLYAAVIQIRWQYGLKQESHPHGLNYAWQWLAQ
LLNLEPLADVTSTLLYDFLEVCGNAMMLTYQDQFVKLLLLIQEEYLPRIEMISTSEQMGS
VARLKLFLENSRKKREIPLPKGYLNQSFWRS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacgggattggaagactcttaaagccctgcagcagtctcccaaggcgaagctt
agatatgagacggaatggagcctggatgaggaggaattgcttgaacgcagtatggcgttg
tgcatgctgtcacctcactcagctcgggtgctggataatataatttcaccggtgcaacgc
agaacttctaacaccaacagcctgtccgctcaggaaatcggagacgatgactccttgaaa
ccagtttcattggactctagaacagatttctcagaccttgttatagagaagcccccagag
agccatcaaccctcattgatgaaggtgcaaacatccatcaacttgcattcggaaagatta
gcagaagtggaaggctccatttatttgtacagggaggctgaaaggataaaaatgcagaat
caactgcagaagcgcctagagatgtgtgtgcagtatgaaaagaactttgcagaccaggct
gcagagcagcttaagcgctttgaggagatgatggagctaaagcagaggcaggagagggat
agattgcaggagcagttggaggcaggttcaaaggaagccttggggcagcaggaaaagcta
aaggaagaacaccggaccagggccaagctcttgaacaggaagttgcgggaagcggagctt
cagaggtaccaggagcaggaacgcatccgccaggaggaaggccgtgagcgtaaacgcagg
ttgtgcgatttgcagcaagaggtgctccagctagtgcaacaaattgaaatggactacaaa
caccaggagactctccgcgtggacctctctacctatagccagcgcgggaaccagatatgt
ggaattctgtccagcgtggtgcgctccagtgagcagagcggttttcctacccaggaggat
gtgaatattggggagcgattcttgcaggagatgcaggctctggtcagcgccatgcagcag
acagttagtgcagctgaggagagaaggaaagcagaagaagtggctgacagagagaagcag
aaagaattggagaaacaacagcagacaaaggcacaagcccctacccctgcccctgctcag
acccagaaacaaagccaaaaagagggactgcaggtaaaagcctctccatgtataatgaag
cgctatcagcagctacagagtttgcttgagcagactctgaatgacattgccccattccaa
gactccaaagactctaaggttaaggccgtcagggtggaacttcagaaagctgtctatatt
ccagtcagccagatctctacagaatctgcttctaaaatgaaggagacttttgaaaaatta
aataacctgcttatgggtaaacgggtctcctcctgtggctccactgtgatctccgtgtct
cagcatccgcaagccctgaactttgtatactacaagctagcagagaagtttgtgaaacaa
ggagagcaggaaatagcttcccatcacgaagcagcgtttccattagcagctgtggcttct
ggtatctgggagcaccaccctcaggtgggggagctgtttctggcacatctgtacaagaag
tgtccatatgctgtgcctttttaccctgcacataagaaaggaacccccattgaagaatat
cggaggattctgggatacgaagtggaggattctcaggttgaatcacaggacaacttccta
aaaaggatgtcgggaatgattcgcctctatgctgctgtcattcagatacgttggcagtat
ggcttgaagcaagagtctcatcctcatgggctgaattatgcgtggcaatggctggcccag
ctcctgaacttggagcccttagctgacgtcacttctactcttctttacgatttcttagag
gtgtgtggaaatgcaatgatgctgacataccaggaccagtttgtgaaattactgctgctg
atccaagaggaatatttacccaggattgaaatgataagcacctcagaacaaatggggtct
gtcgctcgacttaaactatttctagagaactccaggaagaagagagaaattcccttaccc
aaaggatatctgaatcagtccttctggagatcctga
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integrated database retrieval system
