KEGG   Xenopus laevis (African clawed frog): 108704489
Entry
108704489         CDS       T01010                                 
Symbol
kdm5c.L
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xla01009]
    108704489 (kdm5c.L)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108704489 (kdm5c.L)
Enzymes [BR:xla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108704489 (kdm5c.L)
Protein phosphatases and associated proteins [BR:xla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108704489 (kdm5c.L)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108704489 (kdm5c.L)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD DUF4549 RACo_linker DUF2452
Other DBs
NCBI-GeneID: 108704489
NCBI-ProteinID: XP_018096551
Xenbase: XB-GENE-6486184
UniProt: A0A8J0U4S6
LinkDB
Position
8L:complement(11156723..11187618)
AA seq 1506 aa
MLNMETEDFVPPPECPVFEPTWEEFQDPLGYIAKIRPIAEKCGICKIRPPVDWQPPFAVE
VDNFHFTPRIQRLNELEAETRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIV
QEEGGYEPICRERRWARVAQRMGYPSGKNLGSLLRSHYERIIYPFHMYQSGANMVDYRDR
PRYDNEEKDKEYKPHSIPLRQSVQPSKITSYGRRAKRLTQEDPENSDPATQSSSQPTETS
PSWPEPTVEDIEKNPELKKLQIYGAGPKMMGLGLMAKNKNLRKKDSDIPECPPTLVVKEE
VMVEGHGEPGEVHVHVKQERSLSPEPCTKMTMRLRRNTITNSNQFVDAYICRICSRGDDD
DRLLLCDGCDDNYHTFCLLPPLPEPPKGIWHCPKCVMAECKRPPEAFGFEQATREYTLQS
FGEMADAFKADYFNMPVHMVPTELVEREFWRLVNSIEEDVTVQYGADIHSKEFGSGFPML
DGKTELSPEEKAYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIE
DHWSYSINYLHWGEPKTWYGVPSSSAEQLEGVMKKLTPELFESQPDLLHQLVTLMNPNIL
MAHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRKCIEHYRRL
RRYCVFSHEELICKMAACPERLDMSLAAAVHKEMFLMVQEERRLRKALLEQGVTEAEREA
FELLPDDERQCQKCKTTCFLSALACYDCPQGLVCLSHIEDLCQCPPSRQYLRYRYTLDEL
PAMLHKLKGRAESFDTWSNKVHLAIELDGKTKKELVDLKALEAEALEKKFVENEHLQLLR
GSIQEVESCIAEAKKVLGYSKASRSHSTVISLENLIKLVQRIQSVSCVVSQLSQLQCLQE
QAEALQEEAQKCLQALPDSASQLREVLERCYALSVDLPAVRQIERHLRQGEWLERVRTAL
SSGRSGTLQEMRSLLKEAEEVAESPAVEKARSELQELISIALRWEEKAKMCLEARQKHPP
AMLEAIIKEAEHIPVQLPNTLSLKDALCKARAWSADVEEIQSGDHYPCLDDLEGLVAVGR
DLPVKMEELHQLEVQVAAAHSWREKASKTFFKKNSCYTLLEVLCPSADVCSDTGKRSRWK
REKEQGLYRSDIESLGLSAQNLRDPGCIVLAFKEGEQKEKAGILRLRTMNSSSERGCVCV
CGEPPDELMLRCELCQDLFHGLCVPSPRLSNHRGAHTLPSLIWWEWDSRFLCSLCVRSRR
PRLQTILSLLVALQKLPVRLPEGEALQCLTERAMSWQDRARRILATPEISSATTALAERR
KRMQQHCKDPQALRETTRNEQNPVPHENGDRHSENGTCAMPDLDAMAALLPRIEKAAVLE
LSLGSRALLEDLMLEGDLLEVTLEEEASIWRLLLASQVPCIDRLRTLIEIERCERRLALQ
KGKDPEKRKKRRSERGDSYSPPIHPKEELGPKRCRSDSRAQETLSDKESPRKGGSECSQN
GGEKRL
NT seq 4521 nt   +upstreamnt  +downstreamnt
atgttgaacatggagactgaagactttgtgcctccccctgagtgccctgttttcgagccg
acctgggaagagtttcaggatcccttgggatatattgctaaaatcaggcctattgctgaa
aagtgcggaatatgcaaaatccgcccgcctgtggactggcagccaccatttgcagtagaa
gttgacaattttcacttcactccacgtattcagagactcaacgaacttgaagcagagact
agagtcaaactaaactacttggaccaaattgccaagttttgggagatccaaggatcctct
ctgaaaattccaaatgtggagcgcagaatcctggatctgtacagcctgagcaagattgtc
caggaggagggaggttatgagccaatatgcagagaacggaggtgggcacgtgttgcacaa
cgaatgggatacccctcagggaaaaatcttggctcgcttttacgttcacattacgagcgc
atcatctatccctttcatatgtaccagtcgggagcaaacatggtggactacagagacaga
ccacggtatgacaatgaggagaaggataaggaatacaagcctcacagtatcccattgcgg
cagtcggtacaaccctctaaaattaccagctatggacggcgagccaagcgtctaactcag
gaggatcctgagaattcagatcctgccacacagagctcctctcagcccactgaaacatct
ccatcctggccggagccaacagtcgaggacatagagaagaatccagagctgaaaaagctc
cagatatatggcgcaggccccaagatgatgggattgggactgatggccaaaaataagaac
ttgcgcaagaaagacagcgatatcccagaatgccctccgacacttgtggttaaggaagag
gttatggtcgaaggacatggagagccaggggaagtacacgtgcatgtgaaacaggagcgc
tccctcagcccagagccatgcacaaagatgaccatgaggctacgcaggaacaccatcacc
aacagcaatcaatttgtggatgcctacatttgtcgcatttgctcccgtggtgatgacgat
gaccgattgttactgtgtgatggatgtgatgacaactaccacactttctgcctacttcca
cctcttcctgaacccccaaagggtatctggcattgccccaaatgtgttatggcagagtgc
aagcggcctcctgaagcattcggctttgagcaggcaacacgagagtacacactacaaagc
tttggggagatggctgatgcatttaaagctgattacttcaacatgcctgtacatatggtc
ccaacggagctggtggagagggagttttggcgcctggttaacagcatagaggaggatgtt
acagtacaatatggagcagacattcactccaaggagtttggcagtggcttccccatgttg
gatggaaaaacagaactctcccctgaggaaaaggcatatgcaaccagtggctggaatttg
aatgtgatgccagtactggagcagtctgtgctatgtcacataaatgctgacatctctggc
atgaaggtgccctggctttatgtgggaatggtgttctctgccttctgctggcacattgag
gatcactggagttattccatcaactaccttcactggggggagccaaagacttggtatggg
gtgccatcgtcctcggctgagcaacttgaaggtgtgatgaagaagttgacaccagagctt
tttgaaagccaaccagacctcctgcatcagctggtcacacttatgaaccccaacattctc
atggcacatggggtgccggtggtgcgcaccaatcagtgtgcaggggagtttgtcatcaca
tttccaagagcctatcacagtggctttaatcaaggctacaactttgcagaggctgtcaac
ttctgcactgctgactggctcccagccggcaggaagtgcatcgagcattaccggaggttg
cggcgatactgtgtcttctctcatgaagagttgatctgcaagatggctgcttgccccgag
aggttggacatgagcttggcagctgctgtacacaaagagatgttccttatggtacaagaa
gaaaggcgactgcgcaaagccctgttggaacagggtgtcactgaggcagaaagagaagct
tttgagctgcttcccgatgatgaacggcaatgccagaagtgcaagaccacttgcttcctc
tctgctttggcttgttatgactgccctcagggcttggtgtgcttgtcccacattgaggac
ttgtgccagtgcccaccatctcgtcagtatctcaggtatcgttacaccctggatgagctt
ccggccatgttacataagctgaaaggtcgggcagagtcctttgacacgtggtctaataaa
gtgcacctggctatagaattagatgggaaaacaaagaaagaactggtcgatctgaaggct
ctggaagctgaggctttggagaagaagtttgtggagaatgagcatctgcagctattgagg
ggctccatccaggaagttgaaagctgcattgcagaagcaaagaaagtattgggctactcc
aaagctagtaggagtcattctacagtgatctctttggagaatttgatcaaacttgttcag
cgcatacagtctgtctcttgtgtggtctcacagctttcacagcttcagtgtttgcaggaa
caggcagaggccttgcaggaagaagcacagaaatgcttgcaggctctccctgatagtgca
tcccagctgcgggaggtactggagcgttgctatgctctgtcagtggatctaccagcggtc
aggcaaatagagagacatttgcgtcagggggagtggttggagcgagtacgcacagcactg
agttcagggcgctctggcacacttcaagagatgcgctccctgttgaaggaagctgaagaa
gtagctgagagtcctgcagtagaaaaggcacgaagtgaactgcaggagctcatctctatt
gctctgcgctgggaggagaaggccaagatgtgcctggaggcaagacagaagcatcctcct
gccatgttagaggccatcataaaggaagcagaacatattccagtgcagttaccgaatacc
ctgagtctgaaggatgctctctgcaaggccagagcttggagtgccgatgtggaggagata
cagagtggtgatcactacccatgcctggatgacttggaaggtttggtggctgtgggcagg
gatctcccagtgaaaatggaagaacttcatcagctggaggtgcaagtggcagcagctcac
tcctggagggagaaagcatcaaaaacgttctttaagaagaattcctgctacaccctcctg
gaggtgctgtgcccaagtgcagatgtttgttcagacactggaaagaggtctcggtggaag
agagaaaaggagcagggcttgtacaggtcggacattgagagcctagggctgtctgcgcag
aacctgcgggaccccggttgtatagtattggcatttaaggaaggggagcaaaaagagaag
gctggaatccttaggttacgcactatgaattcctcttcagaaagaggctgtgtatgtgtt
tgtggggagccgccagatgagctcatgctgcgatgtgagctgtgccaagacttattccat
gggctgtgtgttcccagccccaggctctcaaatcaccgtggggcacacactcttccatca
cttatttggtgggaatgggacagccgtttcttgtgctcgctctgtgtgcgctcccggaga
ccacggctgcagaccatcctctctctgttggtggccctccagaaactgcctgtgcggctg
ccagagggagaagctttacagtgtttaacagaacgagccatgagctggcaggatcgggct
cgcaggatcctagccacaccggaaatttcttctgccacaacagcacttgcagaacgcaga
aaaagaatgcagcagcattgtaaagatccacaggcactgagagagacaactcgtaatgaa
cagaatcctgttccgcatgagaatggagaccgtcactcagagaatggtacttgcgcaatg
ccagatctagatgcaatggctgcccttctcccgcgtatagaaaaggcagcggttctggag
ttgtcgctgggctcccgagcgctactggaagacttgatgttggagggggaccttctagag
gtgacgctggaagaagaagcaagcatttggcgactgttactggcatcacaggtgccctgt
atagaccggctgcgcaccctgatagagattgaaaggtgtgaacggaggttggctctgcaa
aaaggcaaagacccggagaagaggaagaagaggaggagtgagaggggtgatagctactct
ccccccattcacccaaaagaggagttgggtccaaaaaggtgccgcagcgacagtcgagcg
caggagaccctctctgataaagagagccccaggaaaggagggagtgaatgcagccagaat
ggaggagagaagcgcttgtga

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